RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 TTTY12Q9BZ98 90 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 Q9HAA7 133 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 DSCAMO60469 2012 aa5.04□□□□□ -1.6
GPNMB-209ENST00000474157 ANK3Q12955 4377 aaKnown RBP5.04□□□□□ -1.6
GPNMB-209ENST00000474157 A0A1W2PPR1 153 aa5.03□□□□□ -1.6
GPNMB-209ENST00000474157 CCL24O00175 119 aa5.03□□□□□ -1.6
GPNMB-209ENST00000474157 IGKV1-16P04430 117 aa5.03□□□□□ -1.6
GPNMB-209ENST00000474157 DSCR9P59020 149 aa5.03□□□□□ -1.6
GPNMB-209ENST00000474157 NANOS2P60321 138 aaKnown RBP5.03□□□□□ -1.6
GPNMB-209ENST00000474157 OCR1Q9BZK8 76 aa5.03□□□□□ -1.6
GPNMB-209ENST00000474157 NBEAL2Q6ZNJ1 2754 aa5.03□□□□□ -1.6
GPNMB-209ENST00000474157 SRRM5B3KS81 715 aa5.02□□□□□ -1.61
GPNMB-209ENST00000474157 NCR3O14931 201 aa5.02□□□□□ -1.61
GPNMB-209ENST00000474157 SPTSSBQ8NFR3 76 aa5.02□□□□□ -1.61
GPNMB-209ENST00000474157 FAM215AQ9Y5M1 114 aa5.02□□□□□ -1.61
GPNMB-209ENST00000474157 USF3Q68DE3 2245 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 IGHV3-15A0A0B4J1V0 119 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 IGLV2-23P01705 113 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 MGPP08493 103 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 RPL39P62891 51 aaKnown RBP5.01□□□□□ -1.61
GPNMB-209ENST00000474157 HAMPP81172 84 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 Q6ZQT0 140 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 SCXQ7RTU7 201 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 Q8N9P0 234 aaPredicted RBP5.01□□□□□ -1.61
GPNMB-209ENST00000474157 Q9BRP9 147 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 CDC42SE2Q9NRR3 84 aa5.01□□□□□ -1.61
GPNMB-209ENST00000474157 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.01□□□□□ -1.61
GPNMB-209ENST00000474157 LECT2O14960 151 aa5□□□□□ -1.61
GPNMB-209ENST00000474157 B3GALT5-AS1P59052 145 aa5□□□□□ -1.61
GPNMB-209ENST00000474157 LINC00315P59091 139 aa5□□□□□ -1.61
GPNMB-209ENST00000474157 PRR3P79522 188 aaKnown RBP5□□□□□ -1.61
GPNMB-209ENST00000474157 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
GPNMB-209ENST00000474157 LINC00337Q8N6G1 96 aa5□□□□□ -1.61
GPNMB-209ENST00000474157 SPANXA2-OT1Q8N9U9 137 aa5□□□□□ -1.61
GPNMB-209ENST00000474157 WFDC9Q8NEX5 89 aa5□□□□□ -1.61
GPNMB-209ENST00000474157 Q8TAT8 98 aa5□□□□□ -1.61
GPNMB-209ENST00000474157 HRNRQ86YZ3 2850 aaPredicted RBP5□□□□□ -1.61
GPNMB-209ENST00000474157 IGHV1OR15-1A0A075B7D0 117 aa4.99□□□□□ -1.61
GPNMB-209ENST00000474157 A0A087WYN8 130 aa4.99□□□□□ -1.61
GPNMB-209ENST00000474157 HCP5Q6MZN7 132 aa4.99□□□□□ -1.61
GPNMB-209ENST00000474157 SMIM11BQ8TCY0 68 aa4.99□□□□□ -1.61
GPNMB-209ENST00000474157 CELA1Q9UNI1 258 aa4.99□□□□□ -1.61
GPNMB-209ENST00000474157 IGHV3-64A0A075B6Q5 118 aa4.98□□□□□ -1.61
GPNMB-209ENST00000474157 TRBV10-1A0A0K0K1A3 114 aa4.98□□□□□ -1.61
GPNMB-209ENST00000474157 IGKV2-29A2NJV5 120 aaPredicted RBP4.98□□□□□ -1.61
GPNMB-209ENST00000474157 NDPQ00604 133 aa4.98□□□□□ -1.61
GPNMB-209ENST00000474157 Q8N814 137 aa4.98□□□□□ -1.61
GPNMB-209ENST00000474157 ABCA1O95477 2261 aa4.97□□□□□ -1.61
GPNMB-209ENST00000474157 A6NED7 52 aa4.97□□□□□ -1.61
GPNMB-209ENST00000474157 K7EIM0 57 aa4.97□□□□□ -1.61
GPNMB-209ENST00000474157 IGHV3-48P01763 117 aa4.97□□□□□ -1.61
GPNMB-209ENST00000474157 C9orf129Q5T035 196 aaKnown RBP4.97□□□□□ -1.61
GPNMB-209ENST00000474157 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
GPNMB-209ENST00000474157 C11orf72Q8NBR9 251 aa4.97□□□□□ -1.61
GPNMB-209ENST00000474157 ZCCHC13Q8WW36 166 aaKnown RBP4.97□□□□□ -1.61
GPNMB-209ENST00000474157 H3BPC8 53 aa4.96□□□□□ -1.62
GPNMB-209ENST00000474157 IGHV4-31P0DP07 118 aa4.96□□□□□ -1.62
GPNMB-209ENST00000474157 MRGPRG-AS1Q2M3A8 158 aa4.96□□□□□ -1.62
GPNMB-209ENST00000474157 NTM-AS1Q6ZSK4 140 aa4.96□□□□□ -1.62
GPNMB-209ENST00000474157 SND1-IT1Q9HBX3 110 aa4.96□□□□□ -1.62
GPNMB-209ENST00000474157 SVEP1Q4LDE5 3571 aa4.95□□□□□ -1.62
GPNMB-209ENST00000474157 IGHV6-1A0A0B4J1U7 121 aa4.95□□□□□ -1.62
GPNMB-209ENST00000474157 M0QY20 66 aa4.95□□□□□ -1.62
GPNMB-209ENST00000474157 C6orf99Q4VX62 202 aa4.95□□□□□ -1.62
GPNMB-209ENST00000474157 KLK9Q9UKQ9 250 aa4.95□□□□□ -1.62
GPNMB-209ENST00000474157 WNK1Q9H4A3 2382 aa4.95□□□□□ -1.62
GPNMB-209ENST00000474157 IGHV1-3A0A0C4DH29 117 aa4.94□□□□□ -1.62
GPNMB-209ENST00000474157 K7EQG2 157 aa4.94□□□□□ -1.62
GPNMB-209ENST00000474157 IGHV4-38-2P0DP08 117 aa4.94□□□□□ -1.62
GPNMB-209ENST00000474157 MOBPQ13875 183 aa4.94□□□□□ -1.62
GPNMB-209ENST00000474157 C10orf55Q5SWW7 151 aa4.94□□□□□ -1.62
GPNMB-209ENST00000474157 KRTAP17-1Q9BYP8 105 aa4.94□□□□□ -1.62
GPNMB-209ENST00000474157 CADP27708 2225 aa4.93□□□□□ -1.62
GPNMB-209ENST00000474157 PRAC2D3DTV9 90 aa4.93□□□□□ -1.62
GPNMB-209ENST00000474157 RNASE3P12724 160 aaKnown RBP4.93□□□□□ -1.62
GPNMB-209ENST00000474157 KLK9Q2XQG4 91 aa4.93□□□□□ -1.62
GPNMB-209ENST00000474157 B9D2Q9BPU9 175 aa4.93□□□□□ -1.62
GPNMB-209ENST00000474157 HIGD2AQ9BW72 106 aa4.93□□□□□ -1.62
GPNMB-209ENST00000474157 KMT2CQ8NEZ4 4911 aaKnown RBP4.92□□□□□ -1.62
GPNMB-209ENST00000474157 IGKV2D-30A0A075B6S6 120 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 IGHV3-38A0A0C4DH36 116 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 TRBV6-4A0A1B0GX49 114 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 C18orf65Q6ZTR6 163 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 CNEP1R1Q8N9A8 125 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 PRR15LQ9BU68 103 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 ZNF580Q9UK33 172 aa4.92□□□□□ -1.62
GPNMB-209ENST00000474157 ROS1P08922 2347 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 IGLV3-9A0A075B6K5 115 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 IGKV2-28A0A075B6P5 120 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 IGHV3-49A0A0A0MS15 119 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 IGKV2D-28P01615 120 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 ZFAND2AQ8N6M9 145 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 ZNRF1Q8ND25 227 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 LEAP2Q969E1 77 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 LINC00208Q96KT6 92 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 RETNLBQ9BQ08 111 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 CDKN2A-AS1Q9UH64 79 aa4.91□□□□□ -1.62
GPNMB-209ENST00000474157 RYR3Q15413 4870 aa4.9□□□□□ -1.62
GPNMB-209ENST00000474157 PLCE1Q9P212 2302 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms