RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 LCE3DQ9BYE3 92 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 NAV3Q8IVL0 2385 aa2.11□□□□□ -2.07
BRCA1-212ENST00000473961 TRAV22A0A0B4J277 110 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 ODF3BA8MYP8 253 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 PLXNB1O43157 2135 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 LCA10Q71F78 164 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 LINC00269Q8N2A0 174 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 DEFB119Q8N690 84 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 Q8N814 137 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 DEFB104AQ8WTQ1 72 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 CYP4F30PQ9H0H9 118 aa2.1□□□□□ -2.07
BRCA1-212ENST00000473961 TRBV6-8A0A0A6YYG3 113 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 TRBV10-1A0A0K0K1A3 114 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 TRBV6-4A0A1B0GX49 114 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 CCL4P13236 92 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 CCL18P55774 89 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 COX6A2Q02221 97 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 C7orf65Q6ZTY9 151 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 LIMD2Q9BT23 127 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 U3KQA8 63 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 ARHGAP32A7KAX9 2087 aa2.09□□□□□ -2.07
BRCA1-212ENST00000473961 SDK2Q58EX2 2172 aa2.09□□□□□ -2.08
BRCA1-212ENST00000473961 MUC4Q99102 2169 aa2.09□□□□□ -2.08
BRCA1-212ENST00000473961 POLEQ07864 2286 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 LCE6AA0A183 80 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 A6NN06 94 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 A8MUN3 132 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 NDUFB1O75438 58 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 LINC00158P58513 81 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 DEFB114Q30KQ6 69 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 MINOS1Q5TGZ0 78 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 Q6ZTI0 123 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 COX7B2Q8TF08 81 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 DIRC1Q969H9 104 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 LINC00467Q9BRT7 94 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 PCNTO95613 3336 aa2.08□□□□□ -2.08
BRCA1-212ENST00000473961 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.07□□□□□ -2.08
BRCA1-212ENST00000473961 HCG22E2RYF7 251 aa2.07□□□□□ -2.08
BRCA1-212ENST00000473961 CHKB-CPT1BH3BT56 60 aa2.07□□□□□ -2.08
BRCA1-212ENST00000473961 NDUFA4O00483 81 aa2.07□□□□□ -2.08
BRCA1-212ENST00000473961 ELOF1P60002 83 aaKnown RBP2.07□□□□□ -2.08
BRCA1-212ENST00000473961 Q5VV11 94 aa2.07□□□□□ -2.08
BRCA1-212ENST00000473961 LINC00575Q6W349 94 aa2.07□□□□□ -2.08
BRCA1-212ENST00000473961 Q9BRP9 147 aa2.07□□□□□ -2.08
BRCA1-212ENST00000473961 ASXL3Q9C0F0 2248 aa2.06□□□□□ -2.08
BRCA1-212ENST00000473961 CNTRLQ7Z7A1 2325 aa2.06□□□□□ -2.08
BRCA1-212ENST00000473961 TRGV4A0A0C4DH28 118 aa2.06□□□□□ -2.08
BRCA1-212ENST00000473961 CCL5P13501 91 aa2.06□□□□□ -2.08
BRCA1-212ENST00000473961 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
BRCA1-212ENST00000473961 ZCCHC13Q8WW36 166 aaKnown RBP2.06□□□□□ -2.08
BRCA1-212ENST00000473961 CDC42SE1Q9NRR8 79 aa2.06□□□□□ -2.08
BRCA1-212ENST00000473961 A0A096LNT2 108 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 LOC101927531A0A1B0GV80 90 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 ASB16-AS1Q495Z4 193 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 SPTSSBQ8NFR3 76 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 USMG5Q96IX5 58 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 RHPN1-AS1Q9BWJ2 59 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 CDC42SE2Q9NRR3 84 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 F5P12259 2224 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 CADP27708 2225 aa2.05□□□□□ -2.08
BRCA1-212ENST00000473961 H3BUA1 57 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 PRM2P04554 102 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 MSMBP08118 114 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 COX7BP24311 80 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 DEFB1P60022 68 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 COX17Q14061 63 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.04□□□□□ -2.08
BRCA1-212ENST00000473961 SRCAPQ6ZRS2 3230 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 DEFB132Q7Z7B7 95 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 TOMM7Q9P0U1 55 aa2.04□□□□□ -2.08
BRCA1-212ENST00000473961 KNL1Q8NG31 2342 aa2.03□□□□□ -2.08
BRCA1-212ENST00000473961 ABCA1O95477 2261 aa2.03□□□□□ -2.08
BRCA1-212ENST00000473961 DNAJC13O75165 2243 aa2.03□□□□□ -2.08
BRCA1-212ENST00000473961 TRGV2A0A075B6R0 118 aa2.03□□□□□ -2.08
BRCA1-212ENST00000473961 ETDCA0A1B0GVM5 59 aa2.03□□□□□ -2.08
BRCA1-212ENST00000473961 M0R2N4 97 aa2.03□□□□□ -2.08
BRCA1-212ENST00000473961 LINC01554Q52M75 96 aa2.03□□□□□ -2.08
BRCA1-212ENST00000473961 C9orf116Q5BN46 136 aaPredicted RBP2.03□□□□□ -2.08
BRCA1-212ENST00000473961 A8MTW9 85 aa2.02□□□□□ -2.09
BRCA1-212ENST00000473961 G3V318 75 aa2.02□□□□□ -2.09
BRCA1-212ENST00000473961 PRB3Q04118 309 aaPredicted RBP2.02□□□□□ -2.09
BRCA1-212ENST00000473961 SPINK13Q1W4C9 94 aa2.02□□□□□ -2.09
BRCA1-212ENST00000473961 Q8IZM0 81 aa2.02□□□□□ -2.09
BRCA1-212ENST00000473961 LINC00208Q96KT6 92 aa2.02□□□□□ -2.09
BRCA1-212ENST00000473961 PRR15LQ9BU68 103 aa2.02□□□□□ -2.09
BRCA1-212ENST00000473961 GOLGB1Q14789 3259 aaKnown RBP2.02□□□□□ -2.09
BRCA1-212ENST00000473961 CENPFP49454 3210 aa2.01□□□□□ -2.09
BRCA1-212ENST00000473961 DNAH12Q6ZR08 3092 aa2.01□□□□□ -2.09
BRCA1-212ENST00000473961 IGKV3-7A0A075B6H7 116 aa2.01□□□□□ -2.09
BRCA1-212ENST00000473961 C3orf84H3BNL1 204 aa2.01□□□□□ -2.09
BRCA1-212ENST00000473961 Q6ZQY7 126 aa2.01□□□□□ -2.09
BRCA1-212ENST00000473961 C5orf56Q8N8D9 126 aa2.01□□□□□ -2.09
BRCA1-212ENST00000473961 FDCSPQ8NFU4 85 aa2.01□□□□□ -2.09
BRCA1-212ENST00000473961 MED13Q9UHV7 2174 aa2□□□□□ -2.09
BRCA1-212ENST00000473961 CASC2Q6XLA1 102 aa2□□□□□ -2.09
BRCA1-212ENST00000473961 WFDC10AQ9H1F0 79 aa2□□□□□ -2.09
BRCA1-212ENST00000473961 KCNQ1DNQ9H478 68 aa2□□□□□ -2.09
BRCA1-212ENST00000473961 LINC01558Q9Y6Z2 57 aa2□□□□□ -2.09
BRCA1-212ENST00000473961 CACNA1GO43497 2377 aa1.99□□□□□ -2.09
BRCA1-212ENST00000473961 TRIOBPQ9H2D6 2365 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms