RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 PPDPFQ9H3Y8 114 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 DAZ3Q9NR90 486 aaKnown RBP0.87□□□□□ -2.27
CCDC39-203ENST00000473854 ZMAT5Q9UDW3 170 aaKnown RBP0.87□□□□□ -2.27
CCDC39-203ENST00000473854 UBE2D4Q9Y2X8 147 aa0.87□□□□□ -2.27
CCDC39-203ENST00000473854 CHTOPQ9Y3Y2 248 aaKnown RBP0.87□□□□□ -2.27
CCDC39-203ENST00000473854 A0A096LPF7 62 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV8-6A0A0B4J262 113 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 TRBV10-1A0A0K0K1A3 114 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 MYMXA0A1B0GTQ4 84 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 A0A1B0GWB2 263 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 TRBV6-4A0A1B0GX49 114 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 ZNF815PA8K554 130 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 F5H768 121 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 F8WDY8 70 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.86□□□□□ -2.27
CCDC39-203ENST00000473854 CCL25O15444 150 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 TSPAN13O95857 204 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 PPP1R17O96001 155 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3-30P01768 117 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 SPINK8P0C7L1 97 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3-30-5P0DP03 117 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 DEFB130BP0DP73 79 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 DEFB130AP0DP74 79 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 PLNP26678 52 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 CRYBA4P53673 196 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 APOC4P55056 127 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 MRPS36P82909 103 aaKnown RBP0.86□□□□□ -2.27
CCDC39-203ENST00000473854 COTL1Q14019 142 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 RRN3P1Q2M238 152 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM97Q5BJF2 176 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 COL5A1-AS1Q5SY13 56 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 CLPSL2Q6UWE3 100 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 SOSTDC1Q6X4U4 206 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 FAM19A3Q7Z5A8 133 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 MTURNQ8N3F0 131 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 WFDC9Q8NEX5 89 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 OR4C5Q8NGB2 326 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 OR11H2Q8NH07 326 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 ORAOV1Q8WV07 137 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 RAB37Q96AX2 223 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM141Q96I45 108 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 CST9LQ9H4G1 147 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 NHP2Q9NX24 153 aaKnown RBP0.86□□□□□ -2.27
CCDC39-203ENST00000473854 HIGD1BQ9P298 99 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 UBR4Q5T4S7 5183 aa0.86□□□□□ -2.27
CCDC39-203ENST00000473854 TRGV2A0A075B6R0 118 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV26-1A0A087WT03 109 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TRBV6-8A0A0A6YYG3 113 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TRGV4A0A0C4DH28 118 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV1-58A0A0C4DH39 117 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TINCRA0A1B0GVN0 87 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 A0A1W2PPM0 123 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 LYRM9A8MSI8 78 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 H3BRM9 83 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 H3BUT2 72 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 J3QQQ9 107 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 K7EIL1 84 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 K7EP34 96 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 NDUFA1O15239 70 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 LEPROTO15243 131 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 SIVA1O15304 175 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3-30-3P0DP02 117 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 INSL3P51460 131 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 HERVK_113P61574 105 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 NPC2P61916 151 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 RBX1P62877 108 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 SEC11AP67812 179 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TAL2Q16559 108 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 C12orf74Q32Q52 190 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM170BQ5T4T1 132 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 AMMECR1LQ6DCA0 310 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 ZFAND6Q6FIF0 208 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 IGFL1Q6UW32 110 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 C12orf54Q6X4T0 127 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 DAZ4Q86SG3 579 aaKnown RBP0.85□□□□□ -2.27
CCDC39-203ENST00000473854 DAND5Q8N907 189 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 Q8NDZ9 215 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 CHCHD10Q8WYQ3 142 aaPredicted RBP0.85□□□□□ -2.27
CCDC39-203ENST00000473854 ZNF625Q96I27 306 aaPredicted RBP0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM101Q96IK0 257 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TMEM243Q9BU79 118 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 TIMM21Q9BVV7 248 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 SPANXDQ9BXN6 97 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 GTSF1LQ9H1H1 148 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 C11orf68Q9H3H3 251 aaKnown RBP0.85□□□□□ -2.27
CCDC39-203ENST00000473854 CDC42SE2Q9NRR3 84 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 SPANXB1Q9NS25 103 aaPredicted RBP0.85□□□□□ -2.27
CCDC39-203ENST00000473854 SPANXA1Q9NS26 97 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 SPANXCQ9NY87 97 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 CDKN2A-AS1Q9UH64 79 aa0.85□□□□□ -2.27
CCDC39-203ENST00000473854 FAT4Q6V0I7 4981 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 IGLV10-54A0A075B6I4 117 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 TRAV13-1A0A0B4J241 112 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 IGHV3OR16-9A0A0B4J2B5 98 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 A0A0B4J2C4 111 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 IGKV3OR2-268A0A0C4DH90 116 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 LINC00959A0A1B0GUT2 108 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 SMIM9A6NGZ8 99 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 LINC01549A6NIU2 74 aa0.84□□□□□ -2.27
CCDC39-203ENST00000473854 IGLL5B9A064 214 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms