RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 GPHB5Q86YW7 130 aa1.77□□□□□ -2.13
CDHR3-208ENST00000471910 DIRC1Q969H9 104 aa1.77□□□□□ -2.13
CDHR3-208ENST00000471910 BPESC1Q9GZL8 116 aa1.77□□□□□ -2.13
CDHR3-208ENST00000471910 PROK2Q9HC23 129 aa1.77□□□□□ -2.13
CDHR3-208ENST00000471910 NDUFA12Q9UI09 145 aa1.77□□□□□ -2.13
CDHR3-208ENST00000471910 ABCA4P78363 2273 aa1.77□□□□□ -2.13
CDHR3-208ENST00000471910 ASXL3Q9C0F0 2248 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 CACNA1EQ15878 2313 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 TRAV21A0A0B4J279 112 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 LCE6AA0A183 80 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 hDV103S1A0JD37 113 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 E7EUB6 86 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 LY6HO94772 140 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 Q8N6K4 173 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 TMEM254Q8TBM7 123 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 LINC00308Q8TCZ7 52 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 ORMDL1Q9P0S3 153 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 CCL26Q9Y258 94 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 CHD6Q8TD26 2715 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 WDR87Q6ZQQ6 2873 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 ZFHX3Q15911 3703 aa1.76□□□□□ -2.13
CDHR3-208ENST00000471910 SETD2Q9BYW2 2564 aaPredicted RBP1.75□□□□□ -2.13
CDHR3-208ENST00000471910 ZFHX2Q9C0A1 2572 aaPredicted RBP1.75□□□□□ -2.13
CDHR3-208ENST00000471910 TRIOBPQ9H2D6 2365 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 TRAV23DV6A0A075B6W5 121 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 TRBV6-8A0A0A6YYG3 113 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 IGKV3D-7A0A0C4DH55 119 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 SPTY2D1-AS1A0A0U1RR47 76 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 CRPP02741 224 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 SS18Q15532 418 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 DEFB110Q30KQ9 67 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 KRTAP13-4Q3LI77 160 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 FAM229BQ4G0N7 80 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 CCL4L1Q8NHW4 92 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 LINC00474Q9P2X8 69 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 DOPEY2Q9Y3R5 2298 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 CENPFP49454 3210 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 DNAH12Q6ZR08 3092 aa1.75□□□□□ -2.13
CDHR3-208ENST00000471910 A0A087WVE0 104 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 LOC101927531A0A1B0GV80 90 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 A6NN06 94 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 DEFB108AA8MXU0 73 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 H3BPC8 53 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 K7EIM0 57 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 KRTAP12-1P59990 96 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 NREPQ16612 68 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 FAM74A4Q5TZK3 123 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 ENHOQ6UWT2 76 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 ZNF625Q96I27 306 aaPredicted RBP1.74□□□□□ -2.13
CDHR3-208ENST00000471910 CDC42SE1Q9NRR8 79 aa1.74□□□□□ -2.13
CDHR3-208ENST00000471910 AHCTF1Q8WYP5 2266 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 SORL1Q92673 2214 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 IGKV2-40A0A087WW87 121 aaPredicted RBP1.73□□□□□ -2.13
CDHR3-208ENST00000471910 IGHV3-15A0A0B4J1V0 119 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 TRAV22A0A0B4J277 110 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 C5orf67F2Z3F1 127 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 GNRH2O43555 120 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 IGKV2D-40P01614 121 aaPredicted RBP1.73□□□□□ -2.13
CDHR3-208ENST00000471910 S100A4P26447 101 aaKnown RBP1.73□□□□□ -2.13
CDHR3-208ENST00000471910 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 Q6ZQT0 140 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 Q6ZS52 159 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 LINC00269Q8N2A0 174 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 Q9BRP9 147 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 C14orf132Q9NPU4 83 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 ABCA12Q86UK0 2595 aa1.73□□□□□ -2.13
CDHR3-208ENST00000471910 TECTAO75443 2155 aa1.72□□□□□ -2.13
CDHR3-208ENST00000471910 TRAV12-3A0A0B4J271 114 aa1.72□□□□□ -2.13
CDHR3-208ENST00000471910 A8MUN3 132 aa1.72□□□□□ -2.13
CDHR3-208ENST00000471910 BUB1B-PAK6H3BSN5 160 aa1.72□□□□□ -2.13
CDHR3-208ENST00000471910 M0QY20 66 aa1.72□□□□□ -2.13
CDHR3-208ENST00000471910 RPL39LQ96EH5 51 aaKnown RBP1.72□□□□□ -2.13
CDHR3-208ENST00000471910 KAAG1Q9UBP8 84 aa1.72□□□□□ -2.13
CDHR3-208ENST00000471910 FBN3Q75N90 2809 aa1.72□□□□□ -2.13
CDHR3-208ENST00000471910 CR1P17927 2039 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 SPTBN1Q01082 2364 aaKnown RBP1.71□□□□□ -2.14
CDHR3-208ENST00000471910 IGLV3-9A0A075B6K5 115 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 TRBV6-4A0A1B0GX49 114 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 MGPP08493 103 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 CCL3P10147 92 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 RNASE3P12724 160 aaKnown RBP1.71□□□□□ -2.14
CDHR3-208ENST00000471910 RPL39P62891 51 aaKnown RBP1.71□□□□□ -2.14
CDHR3-208ENST00000471910 Q5VV11 94 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 SOSTDC1Q6X4U4 206 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 Q8N814 137 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 Q8TAT8 98 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 SMIM11BQ8TCY0 68 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 PATE1Q8WXA2 126 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 GAFA1Q96PS6 74 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 CDC42SE2Q9NRR3 84 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 SNURFQ9Y675 71 aa1.71□□□□□ -2.14
CDHR3-208ENST00000471910 TPRP12270 2363 aaKnown RBP1.71□□□□□ -2.14
CDHR3-208ENST00000471910 IGKV2-29A2NJV5 120 aaPredicted RBP1.7□□□□□ -2.14
CDHR3-208ENST00000471910 HCG22E2RYF7 251 aa1.7□□□□□ -2.14
CDHR3-208ENST00000471910 NCR3O14931 201 aa1.7□□□□□ -2.14
CDHR3-208ENST00000471910 PRM2P04554 102 aa1.7□□□□□ -2.14
CDHR3-208ENST00000471910 COX17Q14061 63 aa1.7□□□□□ -2.14
CDHR3-208ENST00000471910 LINC01554Q52M75 96 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms