RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 A0A096LNT2 108 aa2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 GVQW2A0A096LPI5 108 aaPredicted RBP2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 G3V318 75 aa2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 FCER1GP30273 86 aa2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 KRTAP13-4Q3LI77 160 aa2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 ENHOQ6UWT2 76 aa2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 CRCT1Q9UGL9 99 aa2.03□□□□□ -2.08
PRPF40A-206ENST00000471167 NRAPQ86VF7 1730 aa2.03□□□□□ -2.09
PRPF40A-206ENST00000471167 LINC00959A0A1B0GUT2 108 aa2.02□□□□□ -2.09
PRPF40A-206ENST00000471167 NCR3O14931 201 aa2.02□□□□□ -2.09
PRPF40A-206ENST00000471167 NCBP2-AS2Q69YL0 99 aa2.02□□□□□ -2.09
PRPF40A-206ENST00000471167 OTOGLQ3ZCN5 2332 aa2.01□□□□□ -2.09
PRPF40A-206ENST00000471167 DEFB103AP81534 67 aa2.01□□□□□ -2.09
PRPF40A-206ENST00000471167 UBL5Q9BZL1 73 aa2.01□□□□□ -2.09
PRPF40A-206ENST00000471167 ABCA5Q8WWZ7 1642 aa2.01□□□□□ -2.09
PRPF40A-206ENST00000471167 ABCA1O95477 2261 aa2□□□□□ -2.09
PRPF40A-206ENST00000471167 TOMM5Q8N4H5 51 aa2□□□□□ -2.09
PRPF40A-206ENST00000471167 EFCAB6Q5THR3 1501 aa2□□□□□ -2.09
PRPF40A-206ENST00000471167 POLR1AO95602 1720 aaPredicted RBP2□□□□□ -2.09
PRPF40A-206ENST00000471167 SSC5DA1L4H1 1573 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 PIN1P1O15428 100 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 LY6G6CO95867 125 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 PRH1P02810 166 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 SPINK13Q1W4C9 94 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 LINC00575Q6W349 94 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 SSBP3-AS1Q7Z2R9 100 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 KRTAP4-1Q9BYQ7 146 aa1.99□□□□□ -2.09
PRPF40A-206ENST00000471167 DOT1LQ8TEK3 1739 aa1.98□□□□□ -2.09
PRPF40A-206ENST00000471167 COX7BP24311 80 aa1.98□□□□□ -2.09
PRPF40A-206ENST00000471167 LY75O60449 1722 aa1.97□□□□□ -2.09
PRPF40A-206ENST00000471167 F5P12259 2224 aa1.97□□□□□ -2.09
PRPF40A-206ENST00000471167 CACNA1CQ13936 2221 aa1.97□□□□□ -2.09
PRPF40A-206ENST00000471167 NDUFA4O00483 81 aa1.97□□□□□ -2.09
PRPF40A-206ENST00000471167 ADCY10Q96PN6 1610 aa1.97□□□□□ -2.09
PRPF40A-206ENST00000471167 ANKRD36CQ5JPF3 1778 aa1.97□□□□□ -2.09
PRPF40A-206ENST00000471167 SLIT1O75093 1534 aa1.96□□□□□ -2.09
PRPF40A-206ENST00000471167 C3P01024 1663 aa1.96□□□□□ -2.1
PRPF40A-206ENST00000471167 KMT2BQ9UMN6 2715 aaPredicted RBP1.96□□□□□ -2.1
PRPF40A-206ENST00000471167 K7EMI3 77 aa1.96□□□□□ -2.1
PRPF40A-206ENST00000471167 A0A0G2JMZ2 1700 aa1.95□□□□□ -2.1
PRPF40A-206ENST00000471167 TJP1Q07157 1748 aa1.95□□□□□ -2.1
PRPF40A-206ENST00000471167 ZFHX3Q15911 3703 aa1.95□□□□□ -2.1
PRPF40A-206ENST00000471167 ERCC6L2Q5T890 1561 aa1.95□□□□□ -2.1
PRPF40A-206ENST00000471167 RPL37P61927 97 aaKnown RBP1.95□□□□□ -2.1
PRPF40A-206ENST00000471167 KIAA0586Q9BVV6 1533 aa1.95□□□□□ -2.1
PRPF40A-206ENST00000471167 NMES1Q9C002 83 aa1.94□□□□□ -2.1
PRPF40A-206ENST00000471167 IQGAP2Q13576 1575 aa1.93□□□□□ -2.1
PRPF40A-206ENST00000471167 PRB1P04280 392 aa1.93□□□□□ -2.1
PRPF40A-206ENST00000471167 RPL38P63173 70 aaKnown RBP1.93□□□□□ -2.1
PRPF40A-206ENST00000471167 PCOTHQ58A44 107 aa1.93□□□□□ -2.1
PRPF40A-206ENST00000471167 CMC2Q9NRP2 79 aa1.93□□□□□ -2.1
PRPF40A-206ENST00000471167 ASCC3Q8N3C0 2202 aaKnown RBP1.92□□□□□ -2.1
PRPF40A-206ENST00000471167 QSER1Q2KHR3 1735 aa1.91□□□□□ -2.1
PRPF40A-206ENST00000471167 PLXNB2O15031 1838 aa1.91□□□□□ -2.1
PRPF40A-206ENST00000471167 CADP27708 2225 aa1.91□□□□□ -2.1
PRPF40A-206ENST00000471167 CACNA1GO43497 2377 aa1.91□□□□□ -2.1
PRPF40A-206ENST00000471167 UBE2DNLQ8IWF7 75 aa1.91□□□□□ -2.1
PRPF40A-206ENST00000471167 LRRC37AA6NMS7 1700 aa1.91□□□□□ -2.1
PRPF40A-206ENST00000471167 NRXN3Q9Y4C0 1643 aa1.91□□□□□ -2.1
PRPF40A-206ENST00000471167 CPSF4LA6NMK7 179 aaKnown RBP1.9□□□□□ -2.11
PRPF40A-206ENST00000471167 M0R1W7 72 aa1.9□□□□□ -2.11
PRPF40A-206ENST00000471167 AGLP35573 1532 aa1.9□□□□□ -2.11
PRPF40A-206ENST00000471167 ABCC8Q09428 1581 aa1.89□□□□□ -2.11
PRPF40A-206ENST00000471167 ARL14EPLP0DKL9 152 aa1.89□□□□□ -2.11
PRPF40A-206ENST00000471167 SERF2P84101 59 aa1.89□□□□□ -2.11
PRPF40A-206ENST00000471167 MUC6Q6W4X9 2439 aa1.88□□□□□ -2.11
PRPF40A-206ENST00000471167 SPTY2D1-AS1A0A0U1RR47 76 aa1.88□□□□□ -2.11
PRPF40A-206ENST00000471167 DEFB114Q30KQ6 69 aa1.88□□□□□ -2.11
PRPF40A-206ENST00000471167 KCNQ1DNQ9H478 68 aa1.88□□□□□ -2.11
PRPF40A-206ENST00000471167 ABRACLQ9P1F3 81 aa1.88□□□□□ -2.11
PRPF40A-206ENST00000471167 NWD1Q149M9 1564 aa1.88□□□□□ -2.11
PRPF40A-206ENST00000471167 TULP4Q9NRJ4 1543 aa1.87□□□□□ -2.11
PRPF40A-206ENST00000471167 ETDCA0A1B0GVM5 59 aa1.87□□□□□ -2.11
PRPF40A-206ENST00000471167 PLNP26678 52 aa1.87□□□□□ -2.11
PRPF40A-206ENST00000471167 KRTAP12-1P59990 96 aa1.87□□□□□ -2.11
PRPF40A-206ENST00000471167 DDX60LQ5H9U9 1706 aaKnown RBP1.87□□□□□ -2.11
PRPF40A-206ENST00000471167 CACNA1BQ00975 2339 aa1.86□□□□□ -2.11
PRPF40A-206ENST00000471167 I3L3M4 83 aa1.86□□□□□ -2.11
PRPF40A-206ENST00000471167 FCGBPQ9Y6R7 5405 aaPredicted RBP1.86□□□□□ -2.11
PRPF40A-206ENST00000471167 FAM208AQ9UK61 1670 aaKnown RBP1.86□□□□□ -2.11
PRPF40A-206ENST00000471167 ASXL3Q9C0F0 2248 aa1.85□□□□□ -2.11
PRPF40A-206ENST00000471167 IGIPA6NJ69 53 aa1.85□□□□□ -2.11
PRPF40A-206ENST00000471167 ANGP03950 147 aaKnown RBP1.85□□□□□ -2.11
PRPF40A-206ENST00000471167 TNCP24821 2201 aa1.85□□□□□ -2.11
PRPF40A-206ENST00000471167 TECTAO75443 2155 aa1.84□□□□□ -2.11
PRPF40A-206ENST00000471167 SMIM27A0A1W2PRY6 76 aa1.84□□□□□ -2.11
PRPF40A-206ENST00000471167 BAHCC1Q9P281 2608 aa1.83□□□□□ -2.12
PRPF40A-206ENST00000471167 MRPL33O75394 65 aaKnown RBP1.82□□□□□ -2.12
PRPF40A-206ENST00000471167 FXYD6P3P58550 94 aa1.82□□□□□ -2.12
PRPF40A-206ENST00000471167 CRIPTQ9P021 101 aa1.82□□□□□ -2.12
PRPF40A-206ENST00000471167 FBN3Q75N90 2809 aa1.81□□□□□ -2.12
PRPF40A-206ENST00000471167 TRPM2O94759 1503 aa1.81□□□□□ -2.12
PRPF40A-206ENST00000471167 K7EIL1 84 aa1.81□□□□□ -2.12
PRPF40A-206ENST00000471167 URB1O60287 2271 aaKnown RBP1.8□□□□□ -2.12
PRPF40A-206ENST00000471167 DEFB131BA0A096LNP1 70 aa1.8□□□□□ -2.12
PRPF40A-206ENST00000471167 COX6B1P14854 86 aa1.8□□□□□ -2.12
PRPF40A-206ENST00000471167 TP53AIP1Q9HCN2 124 aa1.8□□□□□ -2.12
PRPF40A-206ENST00000471167 TIMM8BQ9Y5J9 83 aaPredicted RBP1.79□□□□□ -2.12
PRPF40A-206ENST00000471167 SORL1Q92673 2214 aa1.79□□□□□ -2.12
PRPF40A-206ENST00000471167 TOGARAM1Q9Y4F4 1720 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms