RNA–Protein interactions for RNA: ENST00000471165.1

CLIP4-209, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 377 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-209ENST00000471165 PVALBP20472 110 aaPredicted RBP0.77□□□□□ -2.29
CLIP4-209ENST00000471165 GCHFRP30047 84 aa0.77□□□□□ -2.29
CLIP4-209ENST00000471165 RPL39P62891 51 aaKnown RBP0.77□□□□□ -2.29
CLIP4-209ENST00000471165 HBBP68871 147 aa0.77□□□□□ -2.29
CLIP4-209ENST00000471165 Q6ZN92 141 aa0.77□□□□□ -2.29
CLIP4-209ENST00000471165 COX8CQ7Z4L0 72 aa0.77□□□□□ -2.29
CLIP4-209ENST00000471165 CEND1Q8N111 149 aa0.77□□□□□ -2.29
CLIP4-209ENST00000471165 ST20-AS1Q8NBB2 130 aa0.77□□□□□ -2.29
CLIP4-209ENST00000471165 SPRR2GQ9BYE4 73 aa0.77□□□□□ -2.29
CLIP4-209ENST00000471165 WDR61Q9GZS3 305 aaKnown RBP0.77□□□□□ -2.29
CLIP4-209ENST00000471165 CSDC2Q9Y534 153 aaKnown RBP0.77□□□□□ -2.29
CLIP4-209ENST00000471165 ANKRD20A5PA0PJZ0 165 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 A8MUU9 505 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 LTAP01374 205 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 IGLC6P0CF74 106 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 PFN2P35080 140 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 POLR2KP53803 58 aaKnown RBP0.76□□□□□ -2.29
CLIP4-209ENST00000471165 SSBP1Q04837 148 aaKnown RBP0.76□□□□□ -2.29
CLIP4-209ENST00000471165 CD164Q04900 197 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 KRTAP20-2Q3LI61 65 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 KRTAP13-4Q3LI77 160 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 TEX261Q6UWH6 196 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 Q8IZM0 81 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 SCGB1C1Q8TD33 95 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 HIST1H2BAQ96A08 127 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 FMC1Q96HJ9 113 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 FAM210AQ96ND0 272 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 SEC22CQ9BRL7 303 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 Q9BRP9 147 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 TIMM21Q9BVV7 248 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 SND1-IT1Q9HBX3 110 aa0.76□□□□□ -2.29
CLIP4-209ENST00000471165 TRAV9-1A0A075B6T8 112 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 TRBV6-5A0A0K0K1A5 114 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 TRBV27A0A0K0K1C4 114 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 A0A1W2PRE2 83 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 F2Z2F3 143 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 TCL1BO95988 128 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 GIPP09681 153 aaPredicted RBP0.75□□□□□ -2.29
CLIP4-209ENST00000471165 STAG3L2P0CL84 134 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 STAG3L3P0CL85 134 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 AKR1C3P42330 323 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 CDC34P49427 236 aaPredicted RBP0.75□□□□□ -2.29
CLIP4-209ENST00000471165 MT1XP80297 61 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 MRPS10P82664 201 aaKnown RBP0.75□□□□□ -2.29
CLIP4-209ENST00000471165 Q5XG85 94 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 SMIM15Q7Z3B0 74 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 BAGE2Q86Y30 109 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 SMIM4Q8WVI0 70 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 SMIM3Q9BZL3 60 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 TMEM191AQ9H0A3 160 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 CYSTM1Q9H1C7 97 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 PRO1933Q9H354 126 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 TMEM167BQ9NRX6 74 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 PRO2289Q9P1D8 64 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 LAMTOR3Q9UHA4 124 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 BLOC1S6Q9UL45 172 aa0.75□□□□□ -2.29
CLIP4-209ENST00000471165 TRBV10-3A0A0K0K1G6 114 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 FAM74A7A6NL05 159 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 SMKR1H3BMG3 65 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 NCR3O14931 201 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 RGS5O15539 181 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 ATP5HO75947 161 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 CXorf1O96002 111 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 SPRR1AP35321 89 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 FAUP35544 74 aaKnown RBP0.74□□□□□ -2.29
CLIP4-209ENST00000471165 CXCL5P42830 114 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 AKR1D1P51857 326 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 VBP1P61758 197 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 MRPS36P82909 103 aaKnown RBP0.74□□□□□ -2.29
CLIP4-209ENST00000471165 NEDD8Q15843 81 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 CST9LP1Q5W188 147 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 SOSTDC1Q6X4U4 206 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 Q6ZVQ6 151 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 LINC01561Q8N1V8 128 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 STOML3Q8TAV4 291 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 COX7B2Q8TF08 81 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 CNBD2Q96M20 576 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 KCNQ1DNQ9H478 68 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 SPANXA1Q9NS26 97 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 CDKN2A-AS1Q9UH64 79 aa0.74□□□□□ -2.29
CLIP4-209ENST00000471165 TRBV20OR9-2A0A075B6H5 130 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 A0A087WXM4 84 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 XKRY2A2RUG3 117 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 NDUFB6O95139 128 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 SIX6O95475 246 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 AQP4P55087 323 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 SLC25A34Q6PIV7 304 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 ALKAL2Q6UX46 152 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 Q6ZRX8 168 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 WFDC13Q8IUB5 93 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 C9orf62Q8N4C0 152 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 DEFB105AQ8NG35 78 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 NKX6-2Q9C056 277 aaPredicted RBP0.73□□□□□ -2.29
CLIP4-209ENST00000471165 ACTR3CQ9C0K3 210 aaPredicted RBP0.73□□□□□ -2.29
CLIP4-209ENST00000471165 VCX3BQ9H321 246 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 VCX3AQ9NNX9 186 aa0.73□□□□□ -2.29
CLIP4-209ENST00000471165 A0A0U1RRA0 63 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 LOC389332A0A1B0GUA5 103 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 CCDC160A6NGH7 325 aa0.72□□□□□ -2.29
CLIP4-209ENST00000471165 D6R8Y8 96 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms