RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 X6R8D5 127 aa6.66□□□□□ -1.34
UBE3C-205ENST00000470408 PCSK5Q92824 1860 aa6.66□□□□□ -1.34
UBE3C-205ENST00000470408 ACANP16112 2415 aa6.66□□□□□ -1.34
UBE3C-205ENST00000470408 A0A096LNT2 108 aa6.65□□□□□ -1.34
UBE3C-205ENST00000470408 PMAIP1Q13794 54 aa6.65□□□□□ -1.34
UBE3C-205ENST00000470408 MDFIQ99750 246 aa6.65□□□□□ -1.34
UBE3C-205ENST00000470408 PPDPFQ9H3Y8 114 aa6.65□□□□□ -1.34
UBE3C-205ENST00000470408 AGRNO00468 2067 aa6.65□□□□□ -1.35
UBE3C-205ENST00000470408 WWC2-AS2Q96NR7 200 aa6.65□□□□□ -1.35
UBE3C-205ENST00000470408 Q8N3U1 123 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 SPATA3Q8NHX4 192 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 PRO0461Q9UI25 63 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 CELA1Q9UNI1 258 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 VPS13AQ96RL7 3174 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 BCE1O60756 84 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 PRR4Q16378 134 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 SOSTDC1Q6X4U4 206 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 COX6A2Q02221 97 aa6.64□□□□□ -1.35
UBE3C-205ENST00000470408 SBSPONQ8IVN8 264 aa6.63□□□□□ -1.35
UBE3C-205ENST00000470408 LINC00846Q9NV44 126 aa6.63□□□□□ -1.35
UBE3C-205ENST00000470408 FLNBO75369 2602 aaKnown RBP6.62□□□□□ -1.35
UBE3C-205ENST00000470408 SMCPP49901 116 aaPredicted RBP6.62□□□□□ -1.35
UBE3C-205ENST00000470408 ESRGQ1W209 222 aa6.62□□□□□ -1.35
UBE3C-205ENST00000470408 TRBV7-6A0A0J9YX20 115 aa6.62□□□□□ -1.35
UBE3C-205ENST00000470408 TMEM254Q8TBM7 123 aa6.62□□□□□ -1.35
UBE3C-205ENST00000470408 CXCL6P80162 114 aa6.62□□□□□ -1.35
UBE3C-205ENST00000470408 LINC00315P59091 139 aa6.62□□□□□ -1.35
UBE3C-205ENST00000470408 IGLV9-49A0A0B4J1Y8 123 aa6.61□□□□□ -1.35
UBE3C-205ENST00000470408 Q8NAQ8 132 aa6.61□□□□□ -1.35
UBE3C-205ENST00000470408 IGLV5-39A0A0G2JS06 123 aa6.61□□□□□ -1.35
UBE3C-205ENST00000470408 IGHV3OR16-9A0A0B4J2B5 98 aa6.61□□□□□ -1.35
UBE3C-205ENST00000470408 C1orf137Q5JT78 98 aa6.6□□□□□ -1.35
UBE3C-205ENST00000470408 COL27A1Q8IZC6 1860 aaPredicted RBP6.6□□□□□ -1.35
UBE3C-205ENST00000470408 A8MTW9 85 aa6.6□□□□□ -1.35
UBE3C-205ENST00000470408 Q6ZRU5 148 aa6.6□□□□□ -1.35
UBE3C-205ENST00000470408 Q6ZVQ6 151 aa6.6□□□□□ -1.35
UBE3C-205ENST00000470408 C9orf116Q5BN46 136 aaPredicted RBP6.6□□□□□ -1.35
UBE3C-205ENST00000470408 SPINK6Q6UWN8 80 aa6.6□□□□□ -1.35
UBE3C-205ENST00000470408 LINC01547P58512 204 aaPredicted RBP6.59□□□□□ -1.35
UBE3C-205ENST00000470408 LINC00208Q96KT6 92 aa6.59□□□□□ -1.35
UBE3C-205ENST00000470408 LIMD2Q9BT23 127 aa6.59□□□□□ -1.36
UBE3C-205ENST00000470408 NBDYA0A0U1RRE5 68 aa6.58□□□□□ -1.36
UBE3C-205ENST00000470408 LINC00575Q6W349 94 aa6.58□□□□□ -1.36
UBE3C-205ENST00000470408 FRYLO94915 3013 aa6.58□□□□□ -1.36
UBE3C-205ENST00000470408 IGLV5-45A0A087WSX0 123 aa6.57□□□□□ -1.36
UBE3C-205ENST00000470408 PRRC2CQ9Y520 2896 aaKnown RBP6.57□□□□□ -1.36
UBE3C-205ENST00000470408 CELSR3Q9NYQ7 3312 aa6.57□□□□□ -1.36
UBE3C-205ENST00000470408 CFAP54Q96N23 3096 aa6.57□□□□□ -1.36
UBE3C-205ENST00000470408 WDFY4Q6ZS81 3184 aa6.56□□□□□ -1.36
UBE3C-205ENST00000470408 COL6A3P12111 3177 aa6.56□□□□□ -1.36
UBE3C-205ENST00000470408 hDV103S1A0JD37 113 aa6.56□□□□□ -1.36
UBE3C-205ENST00000470408 FAM229AH3BQW9 127 aa6.56□□□□□ -1.36
UBE3C-205ENST00000470408 LINC00337Q8N6G1 96 aa6.56□□□□□ -1.36
UBE3C-205ENST00000470408 Q9BRP9 147 aa6.56□□□□□ -1.36
UBE3C-205ENST00000470408 C22orf24Q9Y442 160 aa6.56□□□□□ -1.36
UBE3C-205ENST00000470408 PSPHP1O15172 72 aa6.55□□□□□ -1.36
UBE3C-205ENST00000470408 C19orf73Q9NVV2 129 aa6.55□□□□□ -1.36
UBE3C-205ENST00000470408 DNAH10OSP0CZ25 163 aa6.54□□□□□ -1.36
UBE3C-205ENST00000470408 PRR3P79522 188 aaKnown RBP6.54□□□□□ -1.36
UBE3C-205ENST00000470408 CIRBP-AS1Q8TBR5 109 aa6.54□□□□□ -1.36
UBE3C-205ENST00000470408 A0A1B0GW54 56 aa6.53□□□□□ -1.36
UBE3C-205ENST00000470408 HCG22E2RYF7 251 aa6.52□□□□□ -1.37
UBE3C-205ENST00000470408 LINC00588Q9Y4M8 146 aa6.52□□□□□ -1.37
UBE3C-205ENST00000470408 H0Y9P7 68 aa6.52□□□□□ -1.37
UBE3C-205ENST00000470408 MUC4Q99102 2169 aa6.52□□□□□ -1.37
UBE3C-205ENST00000470408 GVQW2A0A096LPI5 108 aaPredicted RBP6.51□□□□□ -1.37
UBE3C-205ENST00000470408 C4orf26Q17RF5 130 aa6.51□□□□□ -1.37
UBE3C-205ENST00000470408 KRTAP1-3Q8IUG1 177 aa6.51□□□□□ -1.37
UBE3C-205ENST00000470408 HECTD1Q9ULT8 2610 aa6.51□□□□□ -1.37
UBE3C-205ENST00000470408 J3QL48 77 aa6.51□□□□□ -1.37
UBE3C-205ENST00000470408 K7EIL1 84 aa6.51□□□□□ -1.37
UBE3C-205ENST00000470408 SMCR5Q8TEV8 140 aa6.51□□□□□ -1.37
UBE3C-205ENST00000470408 FREM2Q5SZK8 3169 aa6.51□□□□□ -1.37
UBE3C-205ENST00000470408 CSNK1G2-AS1Q8NCQ2 148 aa6.5□□□□□ -1.37
UBE3C-205ENST00000470408 C16orf90A8MZG2 172 aa6.49□□□□□ -1.37
UBE3C-205ENST00000470408 C6orf48Q9UBA6 75 aa6.49□□□□□ -1.37
UBE3C-205ENST00000470408 Q6ZRP5 223 aa6.49□□□□□ -1.37
UBE3C-205ENST00000470408 RTL8CO15255 209 aa6.48□□□□□ -1.37
UBE3C-205ENST00000470408 LINC00167Q96N53 147 aa6.48□□□□□ -1.37
UBE3C-205ENST00000470408 LOC110117498A0A087WWA1 95 aa6.47□□□□□ -1.37
UBE3C-205ENST00000470408 KRTAP1-1Q07627 177 aa6.47□□□□□ -1.37
UBE3C-205ENST00000470408 LINC00612Q8N6U2 182 aa6.46□□□□□ -1.37
UBE3C-205ENST00000470408 DMDP11532 3685 aa6.46□□□□□ -1.37
UBE3C-205ENST00000470408 TM2D3Q9BRN9 247 aa6.46□□□□□ -1.37
UBE3C-205ENST00000470408 FAM218AQ96MZ4 157 aa6.46□□□□□ -1.38
UBE3C-205ENST00000470408 WDFY3Q8IZQ1 3526 aa6.46□□□□□ -1.38
UBE3C-205ENST00000470408 A0A087WSZ3 146 aa6.46□□□□□ -1.38
UBE3C-205ENST00000470408 PRLHP81277 87 aa6.46□□□□□ -1.38
UBE3C-205ENST00000470408 TNRC18O15417 2968 aaPredicted RBP6.45□□□□□ -1.38
UBE3C-205ENST00000470408 PLA2G1BP04054 148 aaKnown RBP6.45□□□□□ -1.38
UBE3C-205ENST00000470408 KRTAP10-11P60412 298 aa6.45□□□□□ -1.38
UBE3C-205ENST00000470408 SMIM29Q86T20 159 aa6.45□□□□□ -1.38
UBE3C-205ENST00000470408 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
UBE3C-205ENST00000470408 Q6ZQT0 140 aa6.44□□□□□ -1.38
UBE3C-205ENST00000470408 H3BPC8 53 aa6.44□□□□□ -1.38
UBE3C-205ENST00000470408 C1orf64Q8NEQ6 169 aa6.44□□□□□ -1.38
UBE3C-205ENST00000470408 IGHV6-1A0A0B4J1U7 121 aa6.43□□□□□ -1.38
UBE3C-205ENST00000470408 HELZ2Q9BYK8 2649 aaKnown RBP6.43□□□□□ -1.38
UBE3C-205ENST00000470408 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
UBE3C-205ENST00000470408 KRTAP10-3P60369 221 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms