RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.95□□□□□ -2.26
BRCA2-202ENST00000470094 LINC01549A6NIU2 74 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 ZNF815PA8K554 130 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 CHKB-CPT1BH3BT56 60 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 TFF1P04155 84 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 CCL3L1P16619 93 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 EDDM3BP56851 147 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 FAM74A4Q5TZK3 123 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 LINC00208Q96KT6 92 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 PROK2Q9HC23 129 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 LENEPQ9Y5L5 61 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 V9GYV3 84 aa0.95□□□□□ -2.26
BRCA2-202ENST00000470094 BPTFQ12830 3046 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 FAM208AQ9UK61 1670 aaKnown RBP0.94□□□□□ -2.26
BRCA2-202ENST00000470094 HMGN4O00479 90 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 PRH1P02810 166 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 C10orf128Q5T292 105 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 SPATA8Q6RVD6 105 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 SPTSSBQ8NFR3 76 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 TMEM263Q8WUH6 116 aaKnown RBP0.94□□□□□ -2.26
BRCA2-202ENST00000470094 SPRR4Q96PI1 79 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 WFDC6Q9BQY6 131 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 NDUFA4L2Q9NRX3 87 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 GOLGA4Q13439 2230 aaKnown RBP0.94□□□□□ -2.26
BRCA2-202ENST00000470094 DUOX1Q9NRD9 1551 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 NRAPQ86VF7 1730 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 TIAM2Q8IVF5 1701 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 DOT1LQ8TEK3 1739 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 TOGARAM1Q9Y4F4 1720 aa0.94□□□□□ -2.26
BRCA2-202ENST00000470094 DDX60LQ5H9U9 1706 aaKnown RBP0.93□□□□□ -2.26
BRCA2-202ENST00000470094 IGIPA6NJ69 53 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 D6R8Y8 96 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 COX6B1P14854 86 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 S100A3P33764 101 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 ZNF137PP52743 207 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 MUSTN1Q8IVN3 82 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 GCC2Q8IWJ2 1684 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 LRP6O75581 1613 aa0.93□□□□□ -2.26
BRCA2-202ENST00000470094 A0A0G2JMZ2 1700 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 LRRC37A2A6NM11 1700 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 LRRC37AA6NMS7 1700 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 CACNA1CQ13936 2221 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 SCN7AQ01118 1682 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 A0A087WTM6 91 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 CTXND1A0A1B0GTU2 59 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 H3BVH4 76 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 K7EIL1 84 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 NDUFB1O75438 58 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 PPP1R17O96001 155 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 C10orf113Q5VZT2 155 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 GNG13Q9P2W3 67 aa0.92□□□□□ -2.26
BRCA2-202ENST00000470094 A0A096LNT2 108 aa0.91□□□□□ -2.26
BRCA2-202ENST00000470094 K7EMI3 77 aa0.91□□□□□ -2.26
BRCA2-202ENST00000470094 M0R135 149 aa0.91□□□□□ -2.26
BRCA2-202ENST00000470094 PLNP26678 52 aa0.91□□□□□ -2.26
BRCA2-202ENST00000470094 DEFB114Q30KQ6 69 aa0.91□□□□□ -2.26
BRCA2-202ENST00000470094 COX7B2Q8TF08 81 aa0.91□□□□□ -2.26
BRCA2-202ENST00000470094 ASH1LQ9NR48 2969 aaKnown RBP0.91□□□□□ -2.26
BRCA2-202ENST00000470094 ZNF831Q5JPB2 1677 aa0.91□□□□□ -2.26
BRCA2-202ENST00000470094 DEPDC5O75140 1603 aa0.9□□□□□ -2.26
BRCA2-202ENST00000470094 C4AP0C0L4 1744 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 PLXNB2O15031 1838 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 A0A087WVE0 104 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 A0A1B0GUT8 65 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 F8VRH5 84 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 FCER1GP30273 86 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 CCL18P55774 89 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 SPAG11BQ08648 103 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 SPINK13Q1W4C9 94 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 SPAG11AQ6PDA7 123 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 KNTC1P50748 2209 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 ROS1P08922 2347 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 CNTRLQ7Z7A1 2325 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 LMO7Q8WWI1 1683 aa0.9□□□□□ -2.27
BRCA2-202ENST00000470094 C4BP0C0L5 1744 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 MED13LQ71F56 2210 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 TRBV6-1A0A0K0K1D8 114 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 UQCR11O14957 56 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 SFTA2Q6UW10 78 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 LINC00472Q9H8W2 130 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 R4GMQ9 66 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 ANKRD17O75179 2603 aaKnown RBP0.89□□□□□ -2.27
BRCA2-202ENST00000470094 ASCC3Q8N3C0 2202 aaKnown RBP0.89□□□□□ -2.27
BRCA2-202ENST00000470094 ALMS1Q8TCU4 4167 aa0.89□□□□□ -2.27
BRCA2-202ENST00000470094 TRAV21A0A0B4J279 112 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 LINC00959A0A1B0GUT2 108 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 I3L3M4 83 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 PIN1P1O15428 100 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 MGPP08493 103 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 SPINK7P58062 85 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 NREPQ16612 68 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 ENHOQ6UWT2 76 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 PLAC4Q8WY50 150 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 PRR15LQ9BU68 103 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 KCNQ1DNQ9H478 68 aa0.88□□□□□ -2.27
BRCA2-202ENST00000470094 F5P12259 2224 aa0.87□□□□□ -2.27
BRCA2-202ENST00000470094 H0Y9P7 68 aa0.87□□□□□ -2.27
BRCA2-202ENST00000470094 H0YGX0 51 aa0.87□□□□□ -2.27
BRCA2-202ENST00000470094 SPINT3P49223 89 aa0.87□□□□□ -2.27
BRCA2-202ENST00000470094 RPL37P61927 97 aaKnown RBP0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms