RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 WFDC2Q14508 124 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 SOSTDC1Q6X4U4 206 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 CHCHD10Q8WYQ3 142 aaPredicted RBP11.63□□□□□ -0.55
MRPL28-208ENST00000469744 PRR34Q9NV39 138 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 M0QXV9 152 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 COX6CP09669 75 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 CXCL5P42830 114 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 C6orf226Q5I0X4 101 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 Q8N1X5 172 aa11.63□□□□□ -0.55
MRPL28-208ENST00000469744 H7C2G1 150 aa11.61□□□□□ -0.55
MRPL28-208ENST00000469744 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
MRPL28-208ENST00000469744 ATXN8Q156A1 80 aa11.61□□□□□ -0.55
MRPL28-208ENST00000469744 CLPSL2Q6UWE3 100 aa11.61□□□□□ -0.55
MRPL28-208ENST00000469744 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
MRPL28-208ENST00000469744 TRIAP1O43715 76 aa11.6□□□□□ -0.55
MRPL28-208ENST00000469744 LINC01600Q96MT4 127 aa11.6□□□□□ -0.55
MRPL28-208ENST00000469744 IGLV5-52A0A0A0MRZ9 124 aa11.59□□□□□ -0.55
MRPL28-208ENST00000469744 LECT2O14960 151 aa11.59□□□□□ -0.55
MRPL28-208ENST00000469744 XGP55808 180 aa11.59□□□□□ -0.55
MRPL28-208ENST00000469744 LINC00158P58513 81 aa11.59□□□□□ -0.55
MRPL28-208ENST00000469744 FOXI1Q12951 378 aa11.59□□□□□ -0.55
MRPL28-208ENST00000469744 MIR7-3HGQ8N6C7 128 aa11.59□□□□□ -0.55
MRPL28-208ENST00000469744 Q8N814 137 aa11.59□□□□□ -0.55
MRPL28-208ENST00000469744 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
MRPL28-208ENST00000469744 KIAA0087Q14695 138 aa11.58□□□□□ -0.56
MRPL28-208ENST00000469744 KLK12Q9UKR0 248 aa11.58□□□□□ -0.56
MRPL28-208ENST00000469744 TRAV13-2A0A0B4J235 113 aa11.57□□□□□ -0.56
MRPL28-208ENST00000469744 SMCPP49901 116 aaPredicted RBP11.57□□□□□ -0.56
MRPL28-208ENST00000469744 HAMPP81172 84 aa11.57□□□□□ -0.56
MRPL28-208ENST00000469744 J3QR89 54 aa11.57□□□□□ -0.56
MRPL28-208ENST00000469744 COX17Q14061 63 aa11.57□□□□□ -0.56
MRPL28-208ENST00000469744 CFAP161Q6P656 301 aa11.57□□□□□ -0.56
MRPL28-208ENST00000469744 CBY1Q9Y3M2 126 aa11.57□□□□□ -0.56
MRPL28-208ENST00000469744 MALP21145 153 aa11.56□□□□□ -0.56
MRPL28-208ENST00000469744 CKS1BP61024 79 aa11.56□□□□□ -0.56
MRPL28-208ENST00000469744 UBE2WQ96B02 151 aa11.56□□□□□ -0.56
MRPL28-208ENST00000469744 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
MRPL28-208ENST00000469744 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
MRPL28-208ENST00000469744 SND1-IT1Q9HBX3 110 aa11.55□□□□□ -0.56
MRPL28-208ENST00000469744 IGKV2D-24A0A075B6R9 120 aa11.54□□□□□ -0.56
MRPL28-208ENST00000469744 GAGE12HA6NDE8 117 aa11.54□□□□□ -0.56
MRPL28-208ENST00000469744 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
MRPL28-208ENST00000469744 ENHOQ6UWT2 76 aa11.54□□□□□ -0.56
MRPL28-208ENST00000469744 IGLV10-54A0A075B6I4 117 aa11.53□□□□□ -0.56
MRPL28-208ENST00000469744 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.52□□□□□ -0.56
MRPL28-208ENST00000469744 LST1O00453 97 aa11.52□□□□□ -0.56
MRPL28-208ENST00000469744 SLC25A20O43772 301 aa11.52□□□□□ -0.56
MRPL28-208ENST00000469744 CRPP02741 224 aa11.52□□□□□ -0.56
MRPL28-208ENST00000469744 MTURNQ8N3F0 131 aa11.52□□□□□ -0.56
MRPL28-208ENST00000469744 PFN2P35080 140 aa11.51□□□□□ -0.57
MRPL28-208ENST00000469744 RNF151Q2KHN1 245 aa11.51□□□□□ -0.57
MRPL28-208ENST00000469744 TEN1Q86WV5 123 aa11.51□□□□□ -0.57
MRPL28-208ENST00000469744 RMI2Q96E14 147 aa11.51□□□□□ -0.57
MRPL28-208ENST00000469744 TRBV10-2A0A0K0K1G8 114 aa11.51□□□□□ -0.57
MRPL28-208ENST00000469744 EPM2AB3EWF7 344 aa11.51□□□□□ -0.57
MRPL28-208ENST00000469744 C9JAW5 83 aa11.51□□□□□ -0.57
MRPL28-208ENST00000469744 SMR3BP02814 79 aaPredicted RBP11.51□□□□□ -0.57
MRPL28-208ENST00000469744 FAT1Q14517 4588 aa11.5□□□□□ -0.57
MRPL28-208ENST00000469744 IGKV2-28A0A075B6P5 120 aa11.5□□□□□ -0.57
MRPL28-208ENST00000469744 IGKV2D-28P01615 120 aa11.5□□□□□ -0.57
MRPL28-208ENST00000469744 RPL28P46779 137 aaKnown RBP11.5□□□□□ -0.57
MRPL28-208ENST00000469744 VPS25Q9BRG1 176 aa11.5□□□□□ -0.57
MRPL28-208ENST00000469744 FAM30AQ9NZY2 134 aa11.5□□□□□ -0.57
MRPL28-208ENST00000469744 SPAG11BQ08648 103 aa11.49□□□□□ -0.57
MRPL28-208ENST00000469744 C2orf82Q6UX34 121 aa11.49□□□□□ -0.57
MRPL28-208ENST00000469744 PPDPFLQ8WWR9 84 aa11.49□□□□□ -0.57
MRPL28-208ENST00000469744 H3BT86 120 aa11.48□□□□□ -0.57
MRPL28-208ENST00000469744 NDUFC2O95298 119 aa11.48□□□□□ -0.57
MRPL28-208ENST00000469744 ANKRD29Q8N6D5 301 aa11.48□□□□□ -0.57
MRPL28-208ENST00000469744 GVQW2A0A096LPI5 108 aaPredicted RBP11.47□□□□□ -0.57
MRPL28-208ENST00000469744 Q5VSD8 79 aa11.47□□□□□ -0.57
MRPL28-208ENST00000469744 LINC00337Q8N6G1 96 aa11.47□□□□□ -0.57
MRPL28-208ENST00000469744 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.57
MRPL28-208ENST00000469744 SRRM2Q9UQ35 2752 aaKnown RBP11.46□□□□□ -0.58
MRPL28-208ENST00000469744 KRTAP26-1Q6PEX3 210 aa11.45□□□□□ -0.58
MRPL28-208ENST00000469744 TRACP01848 142 aa11.44□□□□□ -0.58
MRPL28-208ENST00000469744 CLEC2BQ92478 149 aa11.44□□□□□ -0.58
MRPL28-208ENST00000469744 CARD19Q96LW7 228 aa11.44□□□□□ -0.58
MRPL28-208ENST00000469744 F8WDY8 70 aa11.43□□□□□ -0.58
MRPL28-208ENST00000469744 H0YGX0 51 aa11.41□□□□□ -0.58
MRPL28-208ENST00000469744 UNQ6190/PRO20217Q6UXQ8 127 aa11.4□□□□□ -0.58
MRPL28-208ENST00000469744 Q6ZSA8 131 aa11.4□□□□□ -0.58
MRPL28-208ENST00000469744 SMIM11BQ8TCY0 68 aa11.4□□□□□ -0.58
MRPL28-208ENST00000469744 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
MRPL28-208ENST00000469744 DNAH8Q96JB1 4490 aa11.39□□□□□ -0.59
MRPL28-208ENST00000469744 FLG2Q5D862 2391 aaPredicted RBP11.39□□□□□ -0.59
MRPL28-208ENST00000469744 USP17L23D6RBM5 183 aa11.38□□□□□ -0.59
MRPL28-208ENST00000469744 C2orf48Q96LS8 159 aa11.38□□□□□ -0.59
MRPL28-208ENST00000469744 FAM229AH3BQW9 127 aa11.38□□□□□ -0.59
MRPL28-208ENST00000469744 C10orf25Q5T742 122 aa11.38□□□□□ -0.59
MRPL28-208ENST00000469744 ZNF561-AS1K7EIQ3 104 aa11.36□□□□□ -0.59
MRPL28-208ENST00000469744 C14orf177Q52M58 125 aa11.36□□□□□ -0.59
MRPL28-208ENST00000469744 C9orf116Q5BN46 136 aaPredicted RBP11.36□□□□□ -0.59
MRPL28-208ENST00000469744 OR13C6PQ8NH95 151 aa11.36□□□□□ -0.59
MRPL28-208ENST00000469744 VPS13BQ7Z7G8 4022 aa11.35□□□□□ -0.59
MRPL28-208ENST00000469744 TMEM126AQ9H061 195 aa11.35□□□□□ -0.59
MRPL28-208ENST00000469744 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
MRPL28-208ENST00000469744 SCXQ7RTU7 201 aa11.34□□□□□ -0.59
MRPL28-208ENST00000469744 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
MRPL28-208ENST00000469744 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms