RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 DEFB109BQ30KR1 87 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 MED9Q9NWA0 146 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 CACFD1Q9UGQ2 172 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 R4GMQ9 66 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 WNK2Q9Y3S1 2297 aa2.17□□□□□ -2.06
SCFD1-205ENST00000469043 CFAP47Q6ZTR5 3102 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 BAHCC1Q9P281 2608 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 ASPMQ8IZT6 3477 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 FAM208BQ5VWN6 2430 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 ATMQ13315 3056 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 BOD1L1Q8NFC6 3051 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 LOC110117498A0A087WWA1 95 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 ZNF56Q15929 161 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 S100A16Q96FQ6 103 aaKnown RBP2.16□□□□□ -2.06
SCFD1-205ENST00000469043 FAM167A-AS1Q96KT0 104 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 ABRACLQ9P1F3 81 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 FRYQ5TBA9 3013 aa2.16□□□□□ -2.06
SCFD1-205ENST00000469043 LAMA5O15230 3695 aa2.15□□□□□ -2.06
SCFD1-205ENST00000469043 NBDYA0A0U1RRE5 68 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 IGKV2-29A2NJV5 120 aaPredicted RBP2.15□□□□□ -2.07
SCFD1-205ENST00000469043 CHKB-CPT1BH3BT56 60 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 M0R135 149 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 CCL3L1P16619 93 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 FXYD4P59646 89 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 UBE2D3P61077 147 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 UBE2D2P62837 147 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 TDRG1Q3Y452 100 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 Q8N6K4 173 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 S100A13Q99584 98 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 UQCR10Q9UDW1 63 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 PRO1854Q9UHT4 67 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 AKAP6Q13023 2319 aa2.15□□□□□ -2.07
SCFD1-205ENST00000469043 DSPP15924 2871 aaKnown RBP2.15□□□□□ -2.07
SCFD1-205ENST00000469043 MYO18BQ8IUG5 2567 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 EPG5Q9HCE0 2579 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 USP24Q9UPU5 2620 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 ABCA1O95477 2261 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 TRBV6-7A0A0A0MS04 114 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 TRAV22A0A0B4J277 110 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 IGKV3D-7A0A0C4DH55 119 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 IGKV3OR2-268A0A0C4DH90 116 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 SYS1-DBNDD2H3BUS1 97 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 PIN1P1O15428 100 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 RPS27P42677 84 aaKnown RBP2.14□□□□□ -2.07
SCFD1-205ENST00000469043 EDDM3BP56851 147 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 ELOF1P60002 83 aaKnown RBP2.14□□□□□ -2.07
SCFD1-205ENST00000469043 FXYD3Q14802 87 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 GDF5OSQ5U4N7 250 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 Q5VV11 94 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 COX7B2Q8TF08 81 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 TTTY10Q9BZA0 68 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 V9GYH0 126 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 DOPEY1Q5JWR5 2465 aa2.14□□□□□ -2.07
SCFD1-205ENST00000469043 ZFYVE26Q68DK2 2539 aa2.13□□□□□ -2.07
SCFD1-205ENST00000469043 IGKV2-40A0A087WW87 121 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-205ENST00000469043 IGKV2D-40P01614 121 aaPredicted RBP2.13□□□□□ -2.07
SCFD1-205ENST00000469043 FAM74A4Q5TZK3 123 aa2.13□□□□□ -2.07
SCFD1-205ENST00000469043 SMIM4Q8WVI0 70 aa2.13□□□□□ -2.07
SCFD1-205ENST00000469043 CYSTM1Q9H1C7 97 aa2.13□□□□□ -2.07
SCFD1-205ENST00000469043 DYNLRB1Q9NP97 96 aa2.13□□□□□ -2.07
SCFD1-205ENST00000469043 NXT2Q9NPJ8 142 aaKnown RBP2.13□□□□□ -2.07
SCFD1-205ENST00000469043 LENEPQ9Y5L5 61 aa2.13□□□□□ -2.07
SCFD1-205ENST00000469043 SPG11Q96JI7 2443 aa2.13□□□□□ -2.07
SCFD1-205ENST00000469043 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.12□□□□□ -2.073e-7■■■■■ 60.3
SCFD1-205ENST00000469043 LRRK2Q5S007 2527 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 TNCP24821 2201 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 TMEM14DPA8MWL7 114 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 PPP1R17O96001 155 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 COX6CP09669 75 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 CAV3P56539 151 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 KRTAP13-4Q3LI77 160 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 SFTA2Q6UW10 78 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 TOMM5Q8N4H5 51 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 C5orf56Q8N8D9 126 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 PPP1R1CQ8WVI7 109 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 NDUFA4L2Q9NRX3 87 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 DOPEY2Q9Y3R5 2298 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 IGSF10Q6WRI0 2623 aa2.12□□□□□ -2.07
SCFD1-205ENST00000469043 SPENQ96T58 3664 aaKnown RBP2.12□□□□□ -2.07
SCFD1-205ENST00000469043 USP9XQ93008 2570 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-205ENST00000469043 IGLC7A0M8Q6 106 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 IQCF6A8MYZ5 107 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 H7BZZ5 65 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 SPAG11BQ08648 103 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 SPAG11AQ6PDA7 123 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 ALKAL2Q6UX46 152 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 RABAC1Q9UI14 185 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 ZZEF1O43149 2961 aa2.11□□□□□ -2.07
SCFD1-205ENST00000469043 ANKRD17O75179 2603 aaKnown RBP2.11□□□□□ -2.07
SCFD1-205ENST00000469043 ADGRG4Q8IZF6 3080 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 H3BSH0 61 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 VMO1Q7Z5L0 202 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 LINC00208Q96KT6 92 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 OBSCN-AS1Q96MR7 158 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 BPESC1Q9GZL8 116 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 CREBBPQ92793 2442 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 PTPN13Q12923 2485 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 ZNF462Q96JM2 2506 aa2.1□□□□□ -2.07
SCFD1-205ENST00000469043 CSPG4Q6UVK1 2322 aa2.09□□□□□ -2.07
SCFD1-205ENST00000469043 CFAP46Q8IYW2 2715 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms