RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 IGKV2D-26A0A0A0MRZ7 120 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 A0A1W2PRE2 83 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 SIX6O95475 246 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 LTAP01374 205 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 ESDP10768 282 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 ZNF25P17030 456 aaPredicted RBP1.32□□□□□ -2.2
XRN1-206ENST00000467077 S100A2P29034 98 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 RPL28P46779 137 aaKnown RBP1.32□□□□□ -2.2
XRN1-206ENST00000467077 SPAG11BQ08648 103 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 OR2D3Q8NGH3 330 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 STOML3Q8TAV4 291 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 HIST1H2BAQ96A08 127 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 IMMP2LQ96T52 175 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 MED28Q9H204 178 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 HSPB11Q9Y547 144 aa1.32□□□□□ -2.2
XRN1-206ENST00000467077 A0A1B0GVG6 124 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 CCDC160A6NGH7 325 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 C1orf196B1AJZ1 125 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 NDUFA1O15239 70 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 LYRM1O43325 122 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 NUPR1O60356 82 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 NCR2O95944 276 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 CXCL1P09341 107 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 PET100P0DJ07 73 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 IL7P13232 177 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 ATP6V0CP27449 155 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 AKR1C3P42330 323 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 DEFA1P59665 94 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 C5orf38Q86SI9 138 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 GATD1Q8NB37 220 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 PPP1R1CQ8WVI7 109 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 NKX6-2Q9C056 277 aaPredicted RBP1.31□□□□□ -2.2
XRN1-206ENST00000467077 MRPL35Q9NZE8 188 aaKnown RBP1.31□□□□□ -2.2
XRN1-206ENST00000467077 UBE2D4Q9Y2X8 147 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 ALG5Q9Y673 324 aa1.31□□□□□ -2.2
XRN1-206ENST00000467077 TRAV13-1A0A0B4J241 112 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 A0A1B0GU33 70 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 A0A1W2PNM2 257 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 A6NED7 52 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 INMT-MINDY4F8WBC2 141 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 G3V3Q6 166 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 I3L3M4 83 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 BCE1O60756 84 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 MPC2O95563 127 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 TRGC1P0CF51 173 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 H2BFSP57053 126 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 SERF2P84101 59 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 CD164Q04900 197 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 FAM229BQ4G0N7 80 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 UNQ6190/PRO20217Q6UXQ8 127 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 FP248Q71RG6 208 aaPredicted RBP1.3□□□□□ -2.2
XRN1-206ENST00000467077 OR10D4PQ8NGN7 298 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 RPL39LQ96EH5 51 aaKnown RBP1.3□□□□□ -2.2
XRN1-206ENST00000467077 MRAP2Q96G30 205 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 CCDC32Q9BV29 185 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 SMDT1Q9H4I9 107 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 CDC42SE2Q9NRR3 84 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 C6orf48Q9UBA6 75 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 TNFSF18Q9UNG2 199 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 C22orf24Q9Y442 160 aa1.3□□□□□ -2.2
XRN1-206ENST00000467077 CTXND1A0A1B0GTU2 59 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 SDHAF1A6NFY7 115 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 F2Z2F3 143 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 PLA2G10O15496 165 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 IFNA1P01562 189 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 IGLC6P0CF74 106 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 RPS20P60866 119 aaKnown RBP1.29□□□□□ -2.2
XRN1-206ENST00000467077 CTAG1AP78358 180 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 KRTAP19-2Q3LHN2 52 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 SPAG11AQ6PDA7 123 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 LYZL1Q6UWQ5 148 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 COX6B2Q6YFQ2 88 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 SMIM15Q7Z3B0 74 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 MRPL52Q86TS9 123 aaKnown RBP1.29□□□□□ -2.2
XRN1-206ENST00000467077 BAGE2Q86Y30 109 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 DAND5Q8N907 189 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 TCEAL7Q9BRU2 100 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 PSMG3Q9BT73 122 aaPredicted RBP1.29□□□□□ -2.2
XRN1-206ENST00000467077 HIGD2AQ9BW72 106 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 RNASE7Q9H1E1 156 aaKnown RBP1.29□□□□□ -2.2
XRN1-206ENST00000467077 TMEM242Q9NWH2 141 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 NDUFA12Q9UI09 145 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 MUC17Q685J3 4493 aa1.29□□□□□ -2.2
XRN1-206ENST00000467077 TRBV24-1A0A075B6N3 115 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 TRBV30A0A0K0K1B3 111 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 C7orf77A4D0Y5 90 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 MAP1LC3B2A6NCE7 125 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 ZNF727A8MUV8 499 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 SSNA1O43805 119 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 PFDN1O60925 122 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 FCER1GP30273 86 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 RPL35P42766 123 aaKnown RBP1.28□□□□□ -2.2
XRN1-206ENST00000467077 FOXA3P55318 350 aaPredicted RBP1.28□□□□□ -2.2
XRN1-206ENST00000467077 SMAGPQ0VAQ4 97 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 PCOTHQ58A44 107 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 AKR1C8PQ5T2L2 129 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 TEX261Q6UWH6 196 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 C2orf82Q6UX34 121 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 FAM19A3Q7Z5A8 133 aa1.28□□□□□ -2.2
XRN1-206ENST00000467077 PACRGQ96M98 296 aaPredicted RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms