RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ATP7BP35670 1465 aa0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 MAGI2Q86UL8 1455 aa0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 SNRPFP62306 86 aaKnown RBP0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 PLGLAQ15195 96 aa0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 DEFB112Q30KQ8 113 aa0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 ANKRD17O75179 2603 aaKnown RBP0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 ZFYVE26Q68DK2 2539 aa0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 PTPRZ1P23471 2315 aaPredicted RBP0.19□□□□□ -2.38
GTF3C3-209ENST00000466862 LRRC7Q96NW7 1537 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 PIEZO2Q9H5I5 2752 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 MYMXA0A1B0GTQ4 84 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 CPSF4LA6NMK7 179 aaKnown RBP0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 COX8AP10176 69 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 LINC00643Q86TS7 51 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 DEFB105AQ8NG35 78 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 RABAC1Q9UI14 185 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 DIP2BQ9P265 1576 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 RGPD1P0DJD0 1748 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 IGF2RP11717 2491 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 NAV2Q8IVL1 2488 aa0.18□□□□□ -2.38
GTF3C3-209ENST00000466862 KIF20BQ96Q89 1820 aa0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 URB1O60287 2271 aaKnown RBP0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 SPTY2D1-AS1A0A0U1RR47 76 aa0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 A0A1B0GUT8 65 aa0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 I3L3M4 83 aa0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 KLK9Q2XQG4 91 aa0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 SUPT6HQ7KZ85 1726 aaKnown RBP0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 APLNQ9ULZ1 77 aa0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 RGPD2P0DJD1 1756 aa0.17□□□□□ -2.38
GTF3C3-209ENST00000466862 AKAP6Q13023 2319 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 PTPRQQ9UMZ3 2332 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 ARHGAP35Q9NRY4 1499 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 PKDREJQ9NTG1 2253 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 DOPEY2Q9Y3R5 2298 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 HUWE1Q7Z6Z7 4374 aaKnown RBP0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 CEBPZOSA8MTT3 80 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 SCRIBQ14160 1630 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 ERVK-7P63135 1459 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 QSER1Q2KHR3 1735 aa0.16□□□□□ -2.38
GTF3C3-209ENST00000466862 ZNF831Q5JPB2 1677 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 COL14A1Q05707 1796 aaKnown RBP0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 DCAF1Q9Y4B6 1507 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 KANTRA0A1W2PQU2 76 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 SPINK4O60575 86 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 ACYP1P07311 99 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 COX7BP24311 80 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 ADIRFQ15847 76 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 GAFA1Q96PS6 74 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 S100A13Q99584 98 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 MRPL34Q9BQ48 92 aaKnown RBP0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 ST20Q9HBF5 79 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 USP32Q8NFA0 1604 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 LRRC9Q6ZRR7 1453 aa0.15□□□□□ -2.39
GTF3C3-209ENST00000466862 SPTBN1Q01082 2364 aaKnown RBP0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 FAT2Q9NYQ8 4349 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 UNC79Q9P2D8 2635 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 MYCBP2O75592 4640 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 TRAV21A0A0B4J279 112 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 H1FX-AS1Q4G0G2 97 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 LELP1Q5T871 98 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 WFDC9Q8NEX5 89 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 CELSR1Q9NYQ6 3014 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 PREX1Q8TCU6 1659 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 BCORQ6W2J9 1755 aa0.14□□□□□ -2.39
GTF3C3-209ENST00000466862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 PIK3C2BO00750 1634 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 POLR1AO95602 1720 aaPredicted RBP0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 GVINP1Q7Z2Y8 2422 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 NCOR2Q9Y618 2525 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 VWFP04275 2813 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 PRM1P04553 51 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 NCOA2Q15596 1464 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 TENM4Q6N022 2769 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 TNXBP22105 4242 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 URB2Q14146 1524 aaKnown RBP0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 CLIP1P30622 1438 aa0.13□□□□□ -2.39
GTF3C3-209ENST00000466862 LPAP08519 4548 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 UBR3Q6ZT12 1888 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 LTN1O94822 1766 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 CEP170BQ9Y4F5 1589 aaPredicted RBP0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 H3BUT2 72 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 CCL22O00626 93 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 HRNRQ86YZ3 2850 aaPredicted RBP0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 KDM5DQ9BY66 1539 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 CHD6Q8TD26 2715 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 BSNQ9UPA5 3926 aa0.12□□□□□ -2.39
GTF3C3-209ENST00000466862 WNK2Q9Y3S1 2297 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 DOT1LQ8TEK3 1739 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 HMCN2Q8NDA2 5059 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 NCOR1O75376 2440 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 HIVEP3Q5T1R4 2406 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 REV3LO60673 3130 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 LOC730098B7Z3J9 87 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 NDUFB1O75438 58 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 RPL38P63173 70 aaKnown RBP0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 BVES-AS1Q5T3Y7 98 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 HEPN1Q6WQI6 88 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 MAGI3Q5TCQ9 1506 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 MAST4O15021 2626 aa0.11□□□□□ -2.39
GTF3C3-209ENST00000466862 CFAP74Q9C0B2 1584 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms