RNA–Protein interactions for RNA: ENST00000466560.1

LINC00879-204, long intergenic non-protein coding RNA 879, humanhuman

TSL 5

Gene LINC00879, Length 777 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-204ENST00000466560 MAP3K1Q13233 1512 aa0.69□□□□□ -2.3
LINC00879-204ENST00000466560 LRRC7Q96NW7 1537 aa0.69□□□□□ -2.3
LINC00879-204ENST00000466560 ZNF831Q5JPB2 1677 aa0.69□□□□□ -2.3
LINC00879-204ENST00000466560 CCDC141Q6ZP82 1450 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 LRRC9Q6ZRR7 1453 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 PTPN23Q9H3S7 1636 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 ARFGEF2Q9Y6D5 1785 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 SPINK1P00995 79 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 CFAP74Q9C0B2 1584 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 MYO5CQ9NQX4 1742 aa0.68□□□□□ -2.3
LINC00879-204ENST00000466560 CELSR2Q9HCU4 2923 aa0.67□□□□□ -2.3
LINC00879-204ENST00000466560 DEFB123Q8N688 67 aa0.67□□□□□ -2.3
LINC00879-204ENST00000466560 CACNA1EQ15878 2313 aa0.67□□□□□ -2.3
LINC00879-204ENST00000466560 AHNAKQ09666 5890 aaKnown RBP0.67□□□□□ -2.3
LINC00879-204ENST00000466560 DOT1LQ8TEK3 1739 aa0.67□□□□□ -2.3
LINC00879-204ENST00000466560 ABCC1P33527 1531 aa0.66□□□□□ -2.3
LINC00879-204ENST00000466560 K7EQZ3 153 aa0.66□□□□□ -2.3
LINC00879-204ENST00000466560 USMG5Q96IX5 58 aa0.66□□□□□ -2.3
LINC00879-204ENST00000466560 CRIPTQ9P021 101 aa0.66□□□□□ -2.3
LINC00879-204ENST00000466560 ABCA8O94911 1581 aa0.66□□□□□ -2.3
LINC00879-204ENST00000466560 TPRP12270 2363 aaKnown RBP0.65□□□□□ -2.3
LINC00879-204ENST00000466560 C2CD3Q4AC94 2353 aa0.65□□□□□ -2.3
LINC00879-204ENST00000466560 URB2Q14146 1524 aaKnown RBP0.65□□□□□ -2.31
LINC00879-204ENST00000466560 CHD9Q3L8U1 2897 aa0.65□□□□□ -2.31
LINC00879-204ENST00000466560 IQGAP3Q86VI3 1631 aa0.65□□□□□ -2.31
LINC00879-204ENST00000466560 CFDP00746 253 aaPredicted RBP0.65□□□□□ -2.31
LINC00879-204ENST00000466560 WFDC9Q8NEX5 89 aa0.65□□□□□ -2.31
LINC00879-204ENST00000466560 GAFA1Q96PS6 74 aa0.65□□□□□ -2.31
LINC00879-204ENST00000466560 CFAP43Q8NDM7 1665 aa0.65□□□□□ -2.31
LINC00879-204ENST00000466560 ANKARQ7Z5J8 1434 aa0.64□□□□□ -2.31
LINC00879-204ENST00000466560 PTPRQQ9UMZ3 2332 aa0.64□□□□□ -2.31
LINC00879-204ENST00000466560 TRAV21A0A0B4J279 112 aa0.64□□□□□ -2.31
LINC00879-204ENST00000466560 COX6B1P14854 86 aa0.64□□□□□ -2.31
LINC00879-204ENST00000466560 C18orf32Q8TCD1 76 aa0.64□□□□□ -2.31
LINC00879-204ENST00000466560 NKTRP30414 1462 aaKnown RBP0.64□□□□□ -2.31
LINC00879-204ENST00000466560 F8P00451 2351 aa0.64□□□□□ -2.31
LINC00879-204ENST00000466560 ANKRD17O75179 2603 aaKnown RBP0.63□□□□□ -2.31
LINC00879-204ENST00000466560 A0A087WXM4 84 aa0.63□□□□□ -2.31
LINC00879-204ENST00000466560 SPTY2D1-AS1A0A0U1RR47 76 aa0.63□□□□□ -2.31
LINC00879-204ENST00000466560 COX7BP24311 80 aa0.63□□□□□ -2.31
LINC00879-204ENST00000466560 DEFB121Q5J5C9 76 aa0.63□□□□□ -2.31
LINC00879-204ENST00000466560 ZNF292O60281 2723 aa0.63□□□□□ -2.31
LINC00879-204ENST00000466560 PTPRZ1P23471 2315 aaPredicted RBP0.63□□□□□ -2.31
LINC00879-204ENST00000466560 CEP170BQ9Y4F5 1589 aaPredicted RBP0.62□□□□□ -2.31
LINC00879-204ENST00000466560 NCOA2Q15596 1464 aa0.62□□□□□ -2.31
LINC00879-204ENST00000466560 I3L3M4 83 aa0.62□□□□□ -2.31
LINC00879-204ENST00000466560 NDUFB1O75438 58 aa0.62□□□□□ -2.31
LINC00879-204ENST00000466560 SMIM13P0DJ93 91 aa0.62□□□□□ -2.31
LINC00879-204ENST00000466560 COX8AP10176 69 aa0.62□□□□□ -2.31
LINC00879-204ENST00000466560 SPTBN2O15020 2390 aa0.62□□□□□ -2.31
LINC00879-204ENST00000466560 USP32Q8NFA0 1604 aa0.61□□□□□ -2.31
LINC00879-204ENST00000466560 UGGT2Q9NYU1 1516 aa0.61□□□□□ -2.31
LINC00879-204ENST00000466560 CPSF4LA6NMK7 179 aaKnown RBP0.61□□□□□ -2.31
LINC00879-204ENST00000466560 Q5VSD8 79 aa0.61□□□□□ -2.31
LINC00879-204ENST00000466560 ATP5EP2Q5VTU8 51 aa0.61□□□□□ -2.31
LINC00879-204ENST00000466560 FXYD6Q9H0Q3 95 aa0.61□□□□□ -2.31
LINC00879-204ENST00000466560 NAV2Q8IVL1 2488 aa0.61□□□□□ -2.31
LINC00879-204ENST00000466560 MAGI3Q5TCQ9 1506 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 PLCH1Q4KWH8 1693 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 PREX1Q8TCU6 1659 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 SPRR1BP22528 89 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 SMCO4Q9NRQ5 59 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 RICTORQ6R327 1708 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 USP24Q9UPU5 2620 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 CCDC88BA6NC98 1476 aa0.6□□□□□ -2.31
LINC00879-204ENST00000466560 PIEZO2Q9H5I5 2752 aa0.59□□□□□ -2.31
LINC00879-204ENST00000466560 IFI6P09912 130 aa0.59□□□□□ -2.31
LINC00879-204ENST00000466560 SPRR1AP35321 89 aa0.59□□□□□ -2.31
LINC00879-204ENST00000466560 RPL38P63173 70 aaKnown RBP0.59□□□□□ -2.31
LINC00879-204ENST00000466560 DEFA5Q01523 94 aa0.59□□□□□ -2.31
LINC00879-204ENST00000466560 ANK2Q01484 3957 aa0.59□□□□□ -2.32
LINC00879-204ENST00000466560 ZC3H13Q5T200 1668 aaKnown RBP0.59□□□□□ -2.32
LINC00879-204ENST00000466560 ITSN1Q15811 1721 aa0.58□□□□□ -2.32
LINC00879-204ENST00000466560 DDX60LQ5H9U9 1706 aaKnown RBP0.58□□□□□ -2.32
LINC00879-204ENST00000466560 PARP4Q9UKK3 1724 aaKnown RBP0.58□□□□□ -2.32
LINC00879-204ENST00000466560 UMAD1C9J7I0 102 aa0.58□□□□□ -2.32
LINC00879-204ENST00000466560 IFI27P40305 119 aaPredicted RBP0.58□□□□□ -2.32
LINC00879-204ENST00000466560 DEFB109BQ30KR1 87 aa0.58□□□□□ -2.32
LINC00879-204ENST00000466560 MRPL34Q9BQ48 92 aaKnown RBP0.58□□□□□ -2.32
LINC00879-204ENST00000466560 APLNQ9ULZ1 77 aa0.58□□□□□ -2.32
LINC00879-204ENST00000466560 DNMBPQ6XZF7 1577 aa0.57□□□□□ -2.32
LINC00879-204ENST00000466560 NESP48681 1621 aa0.57□□□□□ -2.32
LINC00879-204ENST00000466560 PKDREJQ9NTG1 2253 aa0.57□□□□□ -2.32
LINC00879-204ENST00000466560 TNRC6CQ9HCJ0 1690 aaKnown RBP0.57□□□□□ -2.32
LINC00879-204ENST00000466560 PDCD5O14737 125 aa0.57□□□□□ -2.32
LINC00879-204ENST00000466560 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
LINC00879-204ENST00000466560 DEFB105AQ8NG35 78 aa0.57□□□□□ -2.32
LINC00879-204ENST00000466560 NWD1Q149M9 1564 aa0.57□□□□□ -2.32
LINC00879-204ENST00000466560 WIZO95785 1651 aa0.56□□□□□ -2.32
LINC00879-204ENST00000466560 NREPQ16612 68 aa0.56□□□□□ -2.32
LINC00879-204ENST00000466560 U3KQA8 63 aa0.56□□□□□ -2.32
LINC00879-204ENST00000466560 CLIP1P30622 1438 aa0.55□□□□□ -2.32
LINC00879-204ENST00000466560 OTOGQ6ZRI0 2925 aa0.55□□□□□ -2.32
LINC00879-204ENST00000466560 H3BVH4 76 aa0.55□□□□□ -2.32
LINC00879-204ENST00000466560 KLK9Q2XQG4 91 aa0.55□□□□□ -2.32
LINC00879-204ENST00000466560 C4AP0C0L4 1744 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms