RNA–Protein interactions for RNA: ENST00000466010.1

TPM3-214, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-214ENST00000466010 SMIM26A0A096LP01 95 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 KRTAP4-8A0A0G2JLE6 195 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 PSMB2P49721 201 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 RPL39P62891 51 aaKnown RBP3.98□□□□□ -1.77
TPM3-214ENST00000466010 SEC11AP67812 179 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 CD164Q04900 197 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 RNASE13Q5GAN3 156 aaKnown RBP3.98□□□□□ -1.77
TPM3-214ENST00000466010 CLLU1Q5K131 121 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 C5orf38Q86SI9 138 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 Q8N8P6 123 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 ORAOV1Q8WV07 137 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 TIMM17AQ99595 171 aa3.98□□□□□ -1.77
TPM3-214ENST00000466010 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
TPM3-214ENST00000466010 TRBV30A0A0K0K1B3 111 aa3.97□□□□□ -1.77
TPM3-214ENST00000466010 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.97□□□□□ -1.77
TPM3-214ENST00000466010 TLX1NBP0CAT3 122 aa3.97□□□□□ -1.77
TPM3-214ENST00000466010 COX19Q49B96 90 aa3.97□□□□□ -1.77
TPM3-214ENST00000466010 LINC00526Q96FQ7 95 aa3.97□□□□□ -1.77
TPM3-214ENST00000466010 PSPHP1O15172 72 aa3.96□□□□□ -1.78
TPM3-214ENST00000466010 S100PP25815 95 aa3.96□□□□□ -1.78
TPM3-214ENST00000466010 HERVK_113P63121 156 aa3.96□□□□□ -1.78
TPM3-214ENST00000466010 LCE1AQ5T7P2 110 aa3.96□□□□□ -1.78
TPM3-214ENST00000466010 PACRGQ96M98 296 aaPredicted RBP3.96□□□□□ -1.78
TPM3-214ENST00000466010 LINC01600Q96MT4 127 aa3.96□□□□□ -1.78
TPM3-214ENST00000466010 LOC389332A0A1B0GUA5 103 aa3.95□□□□□ -1.78
TPM3-214ENST00000466010 MT-ND6P03923 174 aa3.95□□□□□ -1.78
TPM3-214ENST00000466010 C9orf116Q5BN46 136 aaPredicted RBP3.95□□□□□ -1.78
TPM3-214ENST00000466010 FAM19A3Q7Z5A8 133 aa3.95□□□□□ -1.78
TPM3-214ENST00000466010 FAM104AQ969W3 186 aa3.95□□□□□ -1.78
TPM3-214ENST00000466010 AMELXQ99217 191 aa3.95□□□□□ -1.78
TPM3-214ENST00000466010 TMEM218A2RU14 115 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 IGIPA6NJ69 53 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 NDUFC2-KCTD14E9PQ53 114 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 MT1HL1P0DM35 61 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 UBE2D1P51668 147 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 CKS1BP61024 79 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 Q8IZM0 81 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 SEC11CQ9BY50 192 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 GNB1LQ9BYB4 327 aa3.94□□□□□ -1.78
TPM3-214ENST00000466010 LRP1Q07954 4544 aaKnown RBP3.94□□□□□ -1.78
TPM3-214ENST00000466010 RHEBQ15382 184 aa3.93□□□□□ -1.78
TPM3-214ENST00000466010 DIRC1Q969H9 104 aa3.93□□□□□ -1.78
TPM3-214ENST00000466010 TOMM6Q96B49 74 aa3.93□□□□□ -1.78
TPM3-214ENST00000466010 C6orf48Q9UBA6 75 aa3.93□□□□□ -1.78
TPM3-214ENST00000466010 IGLV1-50A0A075B6I6 118 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 A0A1W2PNN7 141 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 NDUFS5O43920 106 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 C6orf99Q4VX62 202 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 C1orf137Q5JT78 98 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 UNQ6190/PRO20217Q6UXQ8 127 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 SCGB3A1Q96QR1 104 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 SPANXB1Q9NS25 103 aaPredicted RBP3.92□□□□□ -1.78
TPM3-214ENST00000466010 PSORS1C2Q9UIG4 136 aa3.92□□□□□ -1.78
TPM3-214ENST00000466010 LINC01546A6NGU7 62 aa3.91□□□□□ -1.78
TPM3-214ENST00000466010 F8VRH5 84 aa3.91□□□□□ -1.78
TPM3-214ENST00000466010 PCP2Q8IVA1 136 aa3.91□□□□□ -1.78
TPM3-214ENST00000466010 SMCO4Q9NRQ5 59 aa3.91□□□□□ -1.78
TPM3-214ENST00000466010 TINCRA0A1B0GVN0 87 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 H3BRM9 83 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 IGLV7-43P04211 117 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 ADCYAP1P18509 176 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 UBE2BP63146 152 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 PDZD11Q5EBL8 140 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 SFTA2Q6UW10 78 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 C2orf82Q6UX34 121 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 FA2HQ7L5A8 372 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 PHF5AQ7RTV0 110 aaKnown RBP3.9□□□□□ -1.79
TPM3-214ENST00000466010 FAM19A5Q7Z5A7 132 aaPredicted RBP3.9□□□□□ -1.79
TPM3-214ENST00000466010 TOMM7Q9P0U1 55 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 TP73-AS1Q9UF72 201 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 PRO0628Q9UI54 55 aa3.9□□□□□ -1.79
TPM3-214ENST00000466010 CARHSP1Q9Y2V2 147 aaKnown RBP3.9□□□□□ -1.79
TPM3-214ENST00000466010 HMCN2Q8NDA2 5059 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 NUPR1O60356 82 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 KRTAP10-8P60410 259 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 PMVKQ15126 192 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 NDUFA5Q16718 116 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 C10orf91Q5T1B1 145 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 COMMD7Q86VX2 200 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 FAT3Q8TDW7 4589 aa3.89□□□□□ -1.79
TPM3-214ENST00000466010 PKHD1L1Q86WI1 4243 aa3.88□□□□□ -1.79
TPM3-214ENST00000466010 RAB5BP61020 215 aa3.88□□□□□ -1.79
TPM3-214ENST00000466010 IFITM2Q01629 132 aa3.88□□□□□ -1.79
TPM3-214ENST00000466010 FABP9Q0Z7S8 132 aa3.88□□□□□ -1.79
TPM3-214ENST00000466010 SVBPQ8N300 66 aa3.88□□□□□ -1.79
TPM3-214ENST00000466010 CST9LQ9H4G1 147 aa3.88□□□□□ -1.79
TPM3-214ENST00000466010 RPS10P5Q9NQ39 176 aa3.88□□□□□ -1.79
TPM3-214ENST00000466010 IGHV6-1A0A0B4J1U7 121 aa3.87□□□□□ -1.79
TPM3-214ENST00000466010 CTAG1AP78358 180 aa3.87□□□□□ -1.79
TPM3-214ENST00000466010 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
TPM3-214ENST00000466010 ZNF861PO60384 105 aa3.86□□□□□ -1.79
TPM3-214ENST00000466010 HBDP02042 147 aa3.86□□□□□ -1.79
TPM3-214ENST00000466010 LINC00614P0C842 121 aa3.86□□□□□ -1.79
TPM3-214ENST00000466010 RPL28P46779 137 aaKnown RBP3.86□□□□□ -1.79
TPM3-214ENST00000466010 COX17Q14061 63 aa3.86□□□□□ -1.79
TPM3-214ENST00000466010 KRTAP4-9Q9BYQ8 210 aa3.86□□□□□ -1.79
TPM3-214ENST00000466010 C22orf24Q9Y442 160 aa3.86□□□□□ -1.79
TPM3-214ENST00000466010 TRAPPC1Q9Y5R8 145 aa3.86□□□□□ -1.79
TPM3-214ENST00000466010 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms