RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 IGHV3OR16-9A0A0B4J2B5 98 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 TAX1BP3O14907 124 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 SMIM13P0DJ93 91 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 ZFAND6Q6FIF0 208 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 MUSTN1Q8IVN3 82 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 DAND5Q8N907 189 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 COX7B2Q8TF08 81 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 LINC00526Q96FQ7 95 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 NHP2Q9NX24 153 aaKnown RBP2.41□□□□□ -2.02
SCN3A-206ENST00000465043 LINC00588Q9Y4M8 146 aa2.41□□□□□ -2.02
SCN3A-206ENST00000465043 A0A087WZ39 114 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 COX7A2LO14548 114 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 NDUFA1O15239 70 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 APOMO95445 188 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 CRPP02741 224 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 KRTAP10-8P60410 259 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 TAL2Q16559 108 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 LBHQ53QV2 105 aaPredicted RBP2.4□□□□□ -2.03
SCN3A-206ENST00000465043 C6orf226Q5I0X4 101 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 MEIG1Q5JSS6 88 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 CD164L2Q6UWJ8 174 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 C2orf82Q6UX34 121 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 C6orf223Q8N319 242 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 C15orf53Q8NAA6 179 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 Q9HAA7 133 aa2.4□□□□□ -2.03
SCN3A-206ENST00000465043 IGKV2D-24A0A075B6R9 120 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 A4D1N5 150 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 A6NDN8 102 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 H3BUT2 72 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 H7C2G1 150 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 PFN2P35080 140 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 CCL18P55774 89 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 LINC00158P58513 81 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 VAMP3Q15836 100 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 MIAQ16674 131 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 LINC01556Q5JQF7 62 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 CFAP161Q6P656 301 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 SFTA2Q6UW10 78 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 SOSTDC1Q6X4U4 206 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 UBE2DNLQ8IWF7 75 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 SPANXB1Q9NS25 103 aaPredicted RBP2.39□□□□□ -2.03
SCN3A-206ENST00000465043 APLNQ9ULZ1 77 aa2.39□□□□□ -2.03
SCN3A-206ENST00000465043 TMEM238C9JI98 176 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 TIMM17BO60830 172 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 CKS1BP61024 79 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 SPAG11BQ08648 103 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 CIRBPQ14011 172 aaKnown RBP2.38□□□□□ -2.03
SCN3A-206ENST00000465043 KIAA0087Q14695 138 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 C9orf116Q5BN46 136 aaPredicted RBP2.38□□□□□ -2.03
SCN3A-206ENST00000465043 CASC10Q5T4H9 136 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 KRTAP26-1Q6PEX3 210 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 UNQ6190/PRO20217Q6UXQ8 127 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 MIR7-3HGQ8N6C7 128 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 LINC00308Q8TCZ7 52 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 SPANXDQ9BXN6 97 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 SPANXCQ9NY87 97 aa2.38□□□□□ -2.03
SCN3A-206ENST00000465043 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
SCN3A-206ENST00000465043 TRAV8-4A0A0B4J246 113 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 A0A1B0GWB2 263 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 IBA57-AS1B1ANH7 110 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 LECT2O14960 151 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 TSPAN13O95857 204 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 HERV-K104P63124 156 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 PRR3P79522 188 aaKnown RBP2.37□□□□□ -2.03
SCN3A-206ENST00000465043 Q8IZM0 81 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 LINC01561Q8N1V8 128 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 C15orf56Q8N910 161 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 ERG28Q9UKR5 140 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 KLK5Q9Y337 293 aaPredicted RBP2.37□□□□□ -2.03
SCN3A-206ENST00000465043 DYNC2H1Q8NCM8 4307 aaKnown RBP2.37□□□□□ -2.03
SCN3A-206ENST00000465043 COL7A1Q02388 2944 aa2.37□□□□□ -2.03
SCN3A-206ENST00000465043 LOC107984156A0A0G2JMH3 177 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 A0A1W2PPM0 123 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 NUPR2A6NF83 97 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 M0R2N4 97 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 RTL8CO15255 209 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 IFITM1P13164 125 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 PSMB2P49721 201 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 Q1RN00 199 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 ARL17AQ8IVW1 177 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 UPK3BQ9BT76 320 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 C6orf48Q9UBA6 75 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 PRO1854Q9UHT4 67 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 PRO0461Q9UI25 63 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 SPCS1Q9Y6A9 102 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 STAB2Q8WWQ8 2551 aa2.36□□□□□ -2.03
SCN3A-206ENST00000465043 DNAH7Q8WXX0 4024 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 IGKV2-28A0A075B6P5 120 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.35□□□□□ -2.03
SCN3A-206ENST00000465043 A0A0B4J2C4 111 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 K7EP34 96 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 IGKV2D-28P01615 120 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 SCGB1C2P0DMR2 95 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 FABP2P12104 132 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 RPL13AP40429 203 aaKnown RBP2.35□□□□□ -2.03
SCN3A-206ENST00000465043 CXCL5P42830 114 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 XGP55808 180 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 WFDC2Q14508 124 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 Q6ZRU5 148 aa2.35□□□□□ -2.03
SCN3A-206ENST00000465043 Q8NDZ9 215 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms