RNA–Protein interactions for RNA: ENST00000464940.1

KPNA1-202, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-202ENST00000464940 SND1-IT1Q9HBX3 110 aa3.85□□□□□ -1.79
KPNA1-202ENST00000464940 PKHD1P08F94 4074 aa3.85□□□□□ -1.79
KPNA1-202ENST00000464940 FAT2Q9NYQ8 4349 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 TRBV20-1A0A075B6N2 111 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 ZNF815PA8K554 130 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 TCL1BO95988 128 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 CTSGP08311 255 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 Q6Q795 121 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 ANKRD29Q8N6D5 301 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 AGPAT4-IT1Q9H0P7 198 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 C11orf68Q9H3H3 251 aaKnown RBP3.84□□□□□ -1.79
KPNA1-202ENST00000464940 LENEPQ9Y5L5 61 aa3.84□□□□□ -1.79
KPNA1-202ENST00000464940 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 TRAV26-2A0A0B4J265 109 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 C11orf86A6NJI1 115 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 A8MWV9 139 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 TMEM262E9PQX1 116 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 IGHV3-30P01768 117 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 CRYGDP07320 174 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 P0DMU3 169 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 FAM231AP0DMU4 169 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 FAM231CP0DMU5 169 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 IGHV3-30-5P0DP03 117 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 TSPEAR-AS2P59090 65 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 LCE3CQ5T5A8 94 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 PRR9Q5T870 116 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 ZFP2Q6ZN57 461 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 C10orf126Q8N4M7 172 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 SCGB3A1Q96QR1 104 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 PCLOQ9Y6V0 5065 aa3.83□□□□□ -1.8
KPNA1-202ENST00000464940 A0A0B4J2C4 111 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 H3BVH4 76 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 ASIPP42127 132 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 Q5W150 140 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 RNF182Q8N6D2 247 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 ZFAND2AQ8N6M9 145 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 RPL39LQ96EH5 51 aaKnown RBP3.82□□□□□ -1.8
KPNA1-202ENST00000464940 RHPN1-AS1Q9BWJ2 59 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 DPH3P1Q9H4G8 78 aa3.82□□□□□ -1.8
KPNA1-202ENST00000464940 RYR1P21817 5038 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 DYNC1H1Q14204 4646 aaKnown RBP3.81□□□□□ -1.8
KPNA1-202ENST00000464940 IGHV3OR16-8A0A075B7F1 116 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 TRAV2A0A0B4J234 112 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 LOC107984156A0A0G2JMH3 177 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 A0A0J9YX75 114 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 IGIPA6NJ69 53 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 IGHV3-33P01772 117 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 LINC00315P59091 139 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 FAM222AQ5U5X8 452 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 SPANXN1Q5VSR9 72 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 SCGB1D4Q6XE38 83 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 ARL17AQ8IVW1 177 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 TMEM263Q8WUH6 116 aaKnown RBP3.81□□□□□ -1.8
KPNA1-202ENST00000464940 SS18L2Q9UHA2 77 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 DNAH17Q9UFH2 4485 aa3.81□□□□□ -1.8
KPNA1-202ENST00000464940 IGKV3-7A0A075B6H7 116 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 TRBV6-5A0A0K0K1A5 114 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 SLC25A20O43772 301 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 PPP1R17O96001 155 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 KRTAP1-4P0C5Y4 121 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 MP68P56378 58 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 Q6ZQT7 251 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 KRTAP5-2Q701N4 177 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 TMEM141Q96I45 108 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 PRO1854Q9UHT4 67 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 PKD1P98161 4303 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 DNAH11Q96DT5 4516 aa3.8□□□□□ -1.8
KPNA1-202ENST00000464940 TRAV21A0A0B4J279 112 aa3.79□□□□□ -1.8
KPNA1-202ENST00000464940 C9JAW5 83 aa3.79□□□□□ -1.8
KPNA1-202ENST00000464940 LEPROTO15243 131 aa3.79□□□□□ -1.8
KPNA1-202ENST00000464940 MIFP14174 115 aa3.79□□□□□ -1.8
KPNA1-202ENST00000464940 POLR2KP53803 58 aaKnown RBP3.79□□□□□ -1.8
KPNA1-202ENST00000464940 DEFB131AP59861 70 aa3.79□□□□□ -1.8
KPNA1-202ENST00000464940 Q8NAQ8 132 aa3.79□□□□□ -1.8
KPNA1-202ENST00000464940 ODF3Q96PU9 254 aa3.79□□□□□ -1.8
KPNA1-202ENST00000464940 TRAV4A0A0B4J268 109 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 TRBV10-2A0A0K0K1G8 114 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 SDHAF1A6NFY7 115 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 H3BT86 120 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 CCDC179H3BU77 68 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 J3QQQ9 107 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 M0R2P5 195 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 RNASE3P12724 160 aaKnown RBP3.78□□□□□ -1.8
KPNA1-202ENST00000464940 RHOHQ15669 191 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 SFTA2Q6UW10 78 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 FAM19A3Q7Z5A8 133 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 ZNRF2Q8NHG8 242 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 SPANXA1Q9NS26 97 aa3.78□□□□□ -1.8
KPNA1-202ENST00000464940 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.77□□□□□ -1.81
KPNA1-202ENST00000464940 TRAV10A0A0B4J240 114 aa3.77□□□□□ -1.81
KPNA1-202ENST00000464940 TRBV30A0A0K0K1B3 111 aa3.77□□□□□ -1.81
KPNA1-202ENST00000464940 TRBV27A0A0K0K1C4 114 aa3.77□□□□□ -1.81
KPNA1-202ENST00000464940 TRBV7-7A0A0K0K1E9 115 aa3.77□□□□□ -1.81
KPNA1-202ENST00000464940 DEFB4AO15263 64 aa3.77□□□□□ -1.81
KPNA1-202ENST00000464940 MGPP08493 103 aa3.77□□□□□ -1.81
KPNA1-202ENST00000464940 ZNF22P17026 224 aaPredicted RBP3.77□□□□□ -1.81
KPNA1-202ENST00000464940 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
KPNA1-202ENST00000464940 RNASE4P34096 147 aaKnown RBP3.77□□□□□ -1.81
KPNA1-202ENST00000464940 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
KPNA1-202ENST00000464940 DCANP1Q8TF63 244 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms