RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 ZNF843Q8N446 348 aa8.57□□□□□ -1.04
CLCNKA-204ENST00000464764 NDUFC2O95298 119 aa8.56□□□□□ -1.04
CLCNKA-204ENST00000464764 REG3AQ06141 175 aa8.55□□□□□ -1.04
CLCNKA-204ENST00000464764 ATP5EP2Q5VTU8 51 aa8.55□□□□□ -1.04
CLCNKA-204ENST00000464764 ANK3Q12955 4377 aaKnown RBP8.55□□□□□ -1.04
CLCNKA-204ENST00000464764 LINC01547P58512 204 aaPredicted RBP8.55□□□□□ -1.04
CLCNKA-204ENST00000464764 Q6ZQY7 126 aa8.55□□□□□ -1.04
CLCNKA-204ENST00000464764 PRO0255Q9UI72 69 aa8.55□□□□□ -1.04
CLCNKA-204ENST00000464764 ITPR2Q14571 2701 aa8.54□□□□□ -1.04
CLCNKA-204ENST00000464764 F8P00451 2351 aa8.54□□□□□ -1.04
CLCNKA-204ENST00000464764 CMC4P56277 68 aaPredicted RBP8.54□□□□□ -1.04
CLCNKA-204ENST00000464764 UNC79Q9P2D8 2635 aa8.54□□□□□ -1.04
CLCNKA-204ENST00000464764 Q6ZVQ6 151 aa8.53□□□□□ -1.04
CLCNKA-204ENST00000464764 X6R8D5 127 aa8.53□□□□□ -1.04
CLCNKA-204ENST00000464764 COX17Q14061 63 aa8.53□□□□□ -1.04
CLCNKA-204ENST00000464764 LINC00482Q8N8I6 264 aa8.53□□□□□ -1.04
CLCNKA-204ENST00000464764 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
CLCNKA-204ENST00000464764 RMI2Q96E14 147 aa8.52□□□□□ -1.05
CLCNKA-204ENST00000464764 IGHV4-28A0A0C4DH34 117 aa8.52□□□□□ -1.05
CLCNKA-204ENST00000464764 H7BZZ5 65 aa8.52□□□□□ -1.05
CLCNKA-204ENST00000464764 CYSRT1A8MQ03 144 aa8.51□□□□□ -1.05
CLCNKA-204ENST00000464764 ZNF561-AS1K7EIQ3 104 aa8.51□□□□□ -1.05
CLCNKA-204ENST00000464764 LINC00612Q8N6U2 182 aa8.51□□□□□ -1.05
CLCNKA-204ENST00000464764 TRBV10-3A0A0K0K1G6 114 aa8.5□□□□□ -1.05
CLCNKA-204ENST00000464764 FAM236DA0A1B0GTK5 79 aa8.5□□□□□ -1.05
CLCNKA-204ENST00000464764 FAM236CP0DP71 79 aa8.5□□□□□ -1.05
CLCNKA-204ENST00000464764 SPAG11BQ08648 103 aa8.5□□□□□ -1.05
CLCNKA-204ENST00000464764 HTN3P15516 51 aa8.49□□□□□ -1.05
CLCNKA-204ENST00000464764 TRRAPQ9Y4A5 3859 aa8.49□□□□□ -1.05
CLCNKA-204ENST00000464764 LOC110117498A0A087WWA1 95 aa8.49□□□□□ -1.05
CLCNKA-204ENST00000464764 TRAV7A0A075B6U4 112 aa8.48□□□□□ -1.05
CLCNKA-204ENST00000464764 IGLV6-57P01721 117 aa8.48□□□□□ -1.05
CLCNKA-204ENST00000464764 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
CLCNKA-204ENST00000464764 TENM1Q9UKZ4 2725 aa8.48□□□□□ -1.05
CLCNKA-204ENST00000464764 TM2D3Q9BRN9 247 aa8.48□□□□□ -1.05
CLCNKA-204ENST00000464764 PKD1L1Q8TDX9 2849 aa8.47□□□□□ -1.05
CLCNKA-204ENST00000464764 Q8N9L7 120 aa8.47□□□□□ -1.05
CLCNKA-204ENST00000464764 KLK12Q9UKR0 248 aa8.47□□□□□ -1.05
CLCNKA-204ENST00000464764 MUC7Q8TAX7 377 aa8.47□□□□□ -1.05
CLCNKA-204ENST00000464764 NDUFC2-KCTD14E9PQ53 114 aa8.46□□□□□ -1.05
CLCNKA-204ENST00000464764 F8WEM9 126 aa8.46□□□□□ -1.05
CLCNKA-204ENST00000464764 TENM4Q6N022 2769 aa8.46□□□□□ -1.06
CLCNKA-204ENST00000464764 CELA1Q9UNI1 258 aa8.45□□□□□ -1.06
CLCNKA-204ENST00000464764 KRTAP10-3P60369 221 aa8.45□□□□□ -1.06
CLCNKA-204ENST00000464764 HIVEP1P15822 2718 aa8.45□□□□□ -1.06
CLCNKA-204ENST00000464764 PDZD2O15018 2839 aa8.44□□□□□ -1.06
CLCNKA-204ENST00000464764 C6orf48Q9UBA6 75 aa8.44□□□□□ -1.06
CLCNKA-204ENST00000464764 TEP1Q99973 2627 aaKnown RBP8.44□□□□□ -1.06
CLCNKA-204ENST00000464764 LINC00336Q6ZUF6 198 aa8.43□□□□□ -1.06
CLCNKA-204ENST00000464764 LINC00474Q9P2X8 69 aa8.43□□□□□ -1.06
CLCNKA-204ENST00000464764 A0A0J9YWU9 116 aa8.43□□□□□ -1.06
CLCNKA-204ENST00000464764 IGHV4-30-4P0DP06 118 aa8.43□□□□□ -1.06
CLCNKA-204ENST00000464764 DAD1P61803 113 aa8.43□□□□□ -1.06
CLCNKA-204ENST00000464764 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.43□□□□□ -1.06
CLCNKA-204ENST00000464764 KLKP1Q107X0 134 aa8.42□□□□□ -1.06
CLCNKA-204ENST00000464764 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
CLCNKA-204ENST00000464764 ZNF73O43830 326 aaPredicted RBP8.42□□□□□ -1.06
CLCNKA-204ENST00000464764 HIGD2BQ4VC39 106 aa8.42□□□□□ -1.06
CLCNKA-204ENST00000464764 C16orf95Q9H693 158 aa8.42□□□□□ -1.06
CLCNKA-204ENST00000464764 PKIGQ9Y2B9 76 aa8.42□□□□□ -1.06
CLCNKA-204ENST00000464764 C1orf43Q9BWL3 253 aa8.41□□□□□ -1.06
CLCNKA-204ENST00000464764 WIPF1O43516 503 aa8.41□□□□□ -1.06
CLCNKA-204ENST00000464764 KRTAP1-1Q07627 177 aa8.41□□□□□ -1.06
CLCNKA-204ENST00000464764 C9orf66Q5T8R8 295 aa8.41□□□□□ -1.06
CLCNKA-204ENST00000464764 SERP1Q9Y6X1 66 aa8.41□□□□□ -1.06
CLCNKA-204ENST00000464764 ATRQ13535 2644 aa8.41□□□□□ -1.06
CLCNKA-204ENST00000464764 TRBV7-4A0A0J9YYF1 115 aa8.4□□□□□ -1.06
CLCNKA-204ENST00000464764 CXCL6P80162 114 aa8.4□□□□□ -1.06
CLCNKA-204ENST00000464764 EPM2AB3EWF7 344 aa8.4□□□□□ -1.07
CLCNKA-204ENST00000464764 COX7BP24311 80 aa8.4□□□□□ -1.07
CLCNKA-204ENST00000464764 MPLKIPQ8TAP9 179 aa8.4□□□□□ -1.07
CLCNKA-204ENST00000464764 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
CLCNKA-204ENST00000464764 LYRM9A8MSI8 78 aa8.39□□□□□ -1.07
CLCNKA-204ENST00000464764 A0A0U1RQV1 116 aa8.38□□□□□ -1.07
CLCNKA-204ENST00000464764 SMR3AQ99954 134 aa8.38□□□□□ -1.07
CLCNKA-204ENST00000464764 PDE6GP18545 87 aa8.37□□□□□ -1.07
CLCNKA-204ENST00000464764 FASNP49327 2511 aaKnown RBP8.37□□□□□ -1.07
CLCNKA-204ENST00000464764 BPY2O14599 106 aa8.36□□□□□ -1.07
CLCNKA-204ENST00000464764 BCE1O60756 84 aa8.36□□□□□ -1.07
CLCNKA-204ENST00000464764 DEFB105AQ8NG35 78 aa8.36□□□□□ -1.07
CLCNKA-204ENST00000464764 C3orf84H3BNL1 204 aa8.36□□□□□ -1.07
CLCNKA-204ENST00000464764 ELOF1P60002 83 aaKnown RBP8.36□□□□□ -1.07
CLCNKA-204ENST00000464764 NREPQ16612 68 aa8.36□□□□□ -1.07
CLCNKA-204ENST00000464764 PRR34Q9NV39 138 aa8.36□□□□□ -1.07
CLCNKA-204ENST00000464764 LELP1Q5T871 98 aa8.35□□□□□ -1.07
CLCNKA-204ENST00000464764 MIFP14174 115 aa8.35□□□□□ -1.07
CLCNKA-204ENST00000464764 BAHCC1Q9P281 2608 aa8.35□□□□□ -1.07
CLCNKA-204ENST00000464764 TRBV7-6A0A0J9YX20 115 aa8.34□□□□□ -1.07
CLCNKA-204ENST00000464764 VPREB1P12018 145 aa8.34□□□□□ -1.07
CLCNKA-204ENST00000464764 BRK1Q8WUW1 75 aa8.34□□□□□ -1.07
CLCNKA-204ENST00000464764 HELZ2Q9BYK8 2649 aaKnown RBP8.34□□□□□ -1.07
CLCNKA-204ENST00000464764 LRCOL1A6NCL2 159 aa8.34□□□□□ -1.07
CLCNKA-204ENST00000464764 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
CLCNKA-204ENST00000464764 PRB2P02812 416 aaPredicted RBP8.33□□□□□ -1.08
CLCNKA-204ENST00000464764 Q8NAQ8 132 aa8.33□□□□□ -1.08
CLCNKA-204ENST00000464764 TMEM254Q8TBM7 123 aa8.33□□□□□ -1.08
CLCNKA-204ENST00000464764 Q6ZRU5 148 aa8.33□□□□□ -1.08
CLCNKA-204ENST00000464764 OTOGQ6ZRI0 2925 aa8.32□□□□□ -1.08
CLCNKA-204ENST00000464764 GVQW2A0A096LPI5 108 aaPredicted RBP8.32□□□□□ -1.08
CLCNKA-204ENST00000464764 FAM229BQ4G0N7 80 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms