RNA–Protein interactions for RNA: ENST00000463478.1

HERC4-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HERC4, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-208ENST00000463478 DIP2CQ9Y2E4 1556 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 SIPA1L3O60292 1781 aaPredicted RBP1.08□□□□□ -2.24
HERC4-208ENST00000463478 MAP2P11137 1827 aaKnown RBP1.08□□□□□ -2.24
HERC4-208ENST00000463478 CSMD3Q7Z407 3707 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 CROCC2H7BZ55 1655 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 A0A0D9SG42 100 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 MGPP08493 103 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 KRTAP2-3P0C7H8 128 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 SAA2P0DJI9 122 aaPredicted RBP1.08□□□□□ -2.24
HERC4-208ENST00000463478 TRGV9Q99603 122 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 VAMP8Q9BV40 100 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 KRTAP2-4Q9BYR9 128 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 PRO3102Q9H379 93 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 FAIMQ9NVQ4 179 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 V9GYS6 101 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 SLIT1O75093 1534 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 DNAH1Q9P2D7 4330 aa1.08□□□□□ -2.24
HERC4-208ENST00000463478 ADGRL2O95490 1459 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 SACSQ9NZJ4 4579 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 GNG2P59768 71 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 SERP2Q8N6R1 65 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 PMCHL2Q9BQD1 86 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 LAMC3Q9Y6N6 1575 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 MAP3K4Q9Y6R4 1608 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 PKHD1P08F94 4074 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 CMYA5Q8N3K9 4069 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 SHPRHQ149N8 1683 aa1.07□□□□□ -2.24
HERC4-208ENST00000463478 FRAS1Q86XX4 4008 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 TTC37Q6PGP7 1564 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 TRBV7-7A0A0K0K1E9 115 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 PVALEFA0A1B0GWK0 134 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 GYPAP02724 150 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 Q9H521 79 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 ADCY10Q96PN6 1610 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 LRP1BQ9NZR2 4599 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 DYNC2H1Q8NCM8 4307 aaKnown RBP1.06□□□□□ -2.24
HERC4-208ENST00000463478 ANKRD36BQ8N2N9 1353 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 NUP188Q5SRE5 1749 aa1.06□□□□□ -2.24
HERC4-208ENST00000463478 DCAF1Q9Y4B6 1507 aa1.05□□□□□ -2.24
HERC4-208ENST00000463478 PREX2Q70Z35 1606 aa1.05□□□□□ -2.24
HERC4-208ENST00000463478 ARL2-SNX15V9GYD0 113 aa1.05□□□□□ -2.24
HERC4-208ENST00000463478 KNTC1P50748 2209 aa1.05□□□□□ -2.24
HERC4-208ENST00000463478 MYH8P13535 1937 aa1.05□□□□□ -2.24
HERC4-208ENST00000463478 SSC5DA1L4H1 1573 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 PI4KAP42356 2102 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 USP32Q8NFA0 1604 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 TANC1Q9C0D5 1861 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 G3V318 75 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 S100A3P33764 101 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 PRB3Q04118 309 aaPredicted RBP1.04□□□□□ -2.24
HERC4-208ENST00000463478 LINC00846Q9NV44 126 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 CACFD1Q9UGQ2 172 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 COL4A6Q14031 1691 aa1.04□□□□□ -2.24
HERC4-208ENST00000463478 DOCK1Q14185 1865 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 BCE1O60756 84 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 IGLC1P0CG04 106 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 PMCHL1Q16048 86 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 UBE2DNLQ8IWF7 75 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 TMEM263Q8WUH6 116 aaKnown RBP1.03□□□□□ -2.24
HERC4-208ENST00000463478 SPRR4Q96PI1 79 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 MLH3Q9UHC1 1453 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 EPRSP07814 1512 aaKnown RBP1.03□□□□□ -2.24
HERC4-208ENST00000463478 ZC3H13Q5T200 1668 aaKnown RBP1.03□□□□□ -2.24
HERC4-208ENST00000463478 TOPAZ1Q8N9V7 1692 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 TNRC6CQ9HCJ0 1690 aaKnown RBP1.03□□□□□ -2.24
HERC4-208ENST00000463478 LRRC37A2A6NM11 1700 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 PRDM2Q13029 1718 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 PAPPA2Q9BXP8 1791 aa1.03□□□□□ -2.24
HERC4-208ENST00000463478 TRBV25-1A0A075B6N4 114 aa1.02□□□□□ -2.25
HERC4-208ENST00000463478 NMBP08949 121 aa1.02□□□□□ -2.25
HERC4-208ENST00000463478 SPINK7P58062 85 aa1.02□□□□□ -2.25
HERC4-208ENST00000463478 LINC00472Q9H8W2 130 aa1.02□□□□□ -2.25
HERC4-208ENST00000463478 NPVFQ9HCQ7 196 aa1.02□□□□□ -2.25
HERC4-208ENST00000463478 MARF1Q9Y4F3 1742 aaKnown RBP1.02□□□□□ -2.25
HERC4-208ENST00000463478 CEP170BQ9Y4F5 1589 aaPredicted RBP1.02□□□□□ -2.25
HERC4-208ENST00000463478 ABCA1O95477 2261 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 DOCK2Q92608 1830 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 KIAA0586Q9BVV6 1533 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 A0A1B0GWA3 101 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 H7BZZ5 65 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 PYY3Q5JQD4 70 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 SPATA8Q6RVD6 105 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 FAM223AQ8IWN6 122 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 KNL1Q8NG31 2342 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 ARFGEF1Q9Y6D6 1849 aa1.01□□□□□ -2.25
HERC4-208ENST00000463478 TARBP1Q13395 1621 aaKnown RBP1□□□□□ -2.25
HERC4-208ENST00000463478 TRRAPQ9Y4A5 3859 aa1□□□□□ -2.25
HERC4-208ENST00000463478 A0A0D9SFI3 127 aa1□□□□□ -2.25
HERC4-208ENST00000463478 SYS1-DBNDD2H3BUS1 97 aa1□□□□□ -2.25
HERC4-208ENST00000463478 UQCRHP07919 91 aa1□□□□□ -2.25
HERC4-208ENST00000463478 HMGN3Q15651 99 aa1□□□□□ -2.25
HERC4-208ENST00000463478 FAM103A1Q9BTL3 118 aaKnown RBP1□□□□□ -2.25
HERC4-208ENST00000463478 ALMS1Q8TCU4 4167 aa1□□□□□ -2.25
HERC4-208ENST00000463478 TJP1Q07157 1748 aa1□□□□□ -2.25
HERC4-208ENST00000463478 IFT172Q9UG01 1749 aa1□□□□□ -2.25
HERC4-208ENST00000463478 UQCRHLA0A096LP55 91 aa0.99□□□□□ -2.25
HERC4-208ENST00000463478 KRTAP2-1Q9BYU5 128 aa0.99□□□□□ -2.25
HERC4-208ENST00000463478 PRO1933Q9H354 126 aa0.99□□□□□ -2.25
HERC4-208ENST00000463478 DYNC1H1Q14204 4646 aaKnown RBP0.99□□□□□ -2.25
HERC4-208ENST00000463478 ABCC2Q92887 1545 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms