RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 SMIM2Q9BVW6 85 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 V9GYY9 64 aa2.85□□□□□ -1.95
BRCA1-206ENST00000461574 IGKV2-28A0A075B6P5 120 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 LINC00862A6NCI5 91 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 HMSDA8MTL9 139 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 F8VRH5 84 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 IGKV2D-28P01615 120 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 KRTAP13-3Q3SY46 172 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 MRPL51Q4U2R6 128 aaKnown RBP2.84□□□□□ -1.95
BRCA1-206ENST00000461574 FAM74A3Q4VXF1 159 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 FAM19A1Q7Z5A9 133 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 Q8IZM0 81 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 LINC00518Q8N0U6 118 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 LINC01561Q8N1V8 128 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 C3orf22Q8N5N4 141 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 DAND5Q8N907 189 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 KRTAP4-1Q9BYQ7 146 aa2.84□□□□□ -1.95
BRCA1-206ENST00000461574 IGLV4-3A0A075B6K6 122 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 TMEM238C9JI98 176 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 TMEM250H0YL14 139 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 M0R2T5 61 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 SNAPINO95295 136 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 G0S2P27469 103 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 CXCL5P42830 114 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 FAM104BQ5XKR9 115 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 SLC51BQ86UW2 128 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 KRTAP13-1Q8IUC0 172 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 CBLN2Q8IUK8 224 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 FAM104AQ969W3 186 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 SMIM7Q9BQ49 75 aa2.83□□□□□ -1.96
BRCA1-206ENST00000461574 TRBV24-1A0A075B6N3 115 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 D6R8Y8 96 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 F8W036 122 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 ATP5LO75964 103 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 NPYP01303 97 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 RAB5BP61020 215 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 PAPPA-AS1Q5QFB9 102 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 FAM19A2Q8N3H0 131 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 HIGD2AQ9BW72 106 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 EIF5A2Q9GZV4 153 aaKnown RBP2.82□□□□□ -1.96
BRCA1-206ENST00000461574 NAT8BQ9UHF3 227 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 PYGO1Q9Y3Y4 419 aa2.82□□□□□ -1.96
BRCA1-206ENST00000461574 SPINK1P00995 79 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 S100A8P05109 93 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 HERVK_113P63121 156 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 SEC11AP67812 179 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 MT1HP80294 61 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 ZC2HC1BQ5TFG8 222 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 SMIM29Q86T20 159 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 LINC01551Q86U37 167 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 Q8NBF4 154 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 GNB1LQ9BYB4 327 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 TMEM126AQ9H061 195 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 OSTCQ9NRP0 149 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 CYSLTR1Q9Y271 337 aa2.81□□□□□ -1.96
BRCA1-206ENST00000461574 ZNF706Q9Y5V0 76 aaPredicted RBP2.81□□□□□ -1.96
BRCA1-206ENST00000461574 LOC389332A0A1B0GUA5 103 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 SCO1O75880 301 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 PPBPP02775 128 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 MRPL54Q6P161 138 aaKnown RBP2.8□□□□□ -1.96
BRCA1-206ENST00000461574 ORMDL3Q8N138 153 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 PLEKHB2Q96CS7 222 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 BATF3Q9NR55 127 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 CDKN2A-AS1Q9UH64 79 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 V9GYV3 84 aa2.8□□□□□ -1.96
BRCA1-206ENST00000461574 PFN2P35080 140 aa2.79□□□□□ -1.96
BRCA1-206ENST00000461574 RPL24P83731 157 aaKnown RBP2.79□□□□□ -1.96
BRCA1-206ENST00000461574 ADIRFQ15847 76 aa2.79□□□□□ -1.96
BRCA1-206ENST00000461574 C2orf66Q6UXQ4 117 aa2.79□□□□□ -1.96
BRCA1-206ENST00000461574 COX7B2Q8TF08 81 aa2.79□□□□□ -1.96
BRCA1-206ENST00000461574 PRELID3AQ96N28 172 aa2.79□□□□□ -1.96
BRCA1-206ENST00000461574 SPRR4Q96PI1 79 aa2.79□□□□□ -1.96
BRCA1-206ENST00000461574 MAP1LC3AQ9H492 121 aa2.79□□□□□ -1.96
BRCA1-206ENST00000461574 IGLV8-61A0A075B6I0 122 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 SMIM27A0A1W2PRY6 76 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 M0R378 163 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 SLC25A20O43772 301 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 S100A1P23297 94 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 PDZD11Q5EBL8 140 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 COX6B2Q6YFQ2 88 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 TMEM136Q6ZRR5 245 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 AMELXQ99217 191 aa2.78□□□□□ -1.96
BRCA1-206ENST00000461574 IGLV9-49A0A0B4J1Y8 123 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 SMIM1B2RUZ4 78 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 CFC1P0CG37 223 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 MOBPQ13875 183 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 TAL2Q16559 108 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 ORMDL2Q53FV1 153 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 PCOTHQ58A44 107 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 FAM19A3Q7Z5A8 133 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
BRCA1-206ENST00000461574 SPANXB1Q9NS25 103 aaPredicted RBP2.77□□□□□ -1.97
BRCA1-206ENST00000461574 SPINK8P0C7L1 97 aa2.76□□□□□ -1.97
BRCA1-206ENST00000461574 RPL23P62829 140 aaKnown RBP2.76□□□□□ -1.97
BRCA1-206ENST00000461574 ALKAL2Q6UX46 152 aa2.76□□□□□ -1.97
BRCA1-206ENST00000461574 Q6ZVQ6 151 aa2.76□□□□□ -1.97
BRCA1-206ENST00000461574 Q8N377 158 aa2.76□□□□□ -1.97
BRCA1-206ENST00000461574 Q8N8P6 123 aa2.76□□□□□ -1.97
BRCA1-206ENST00000461574 TIMM17AQ99595 171 aa2.76□□□□□ -1.97
BRCA1-206ENST00000461574 LAMTOR2Q9Y2Q5 125 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms