RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 EP300Q09472 2414 aaPredicted RBP-0.07□□□□□ -2.42
VCL-203ENST00000461383 ANKRD26Q9UPS8 1709 aa-0.07□□□□□ -2.42
VCL-203ENST00000461383 CRYBG1Q9Y4K1 1723 aa-0.07□□□□□ -2.42
VCL-203ENST00000461383 ALKAL2Q6UX46 152 aa-0.08□□□□□ -2.42
VCL-203ENST00000461383 KIAA1551Q9HCM1 1747 aa-0.08□□□□□ -2.42
VCL-203ENST00000461383 NRXN1Q9ULB1 1477 aa-0.09□□□□□ -2.42
VCL-203ENST00000461383 UBR3Q6ZT12 1888 aa-0.09□□□□□ -2.42
VCL-203ENST00000461383 TRBV7-7A0A0K0K1E9 115 aa-0.09□□□□□ -2.42
VCL-203ENST00000461383 F8WEM9 126 aa-0.09□□□□□ -2.42
VCL-203ENST00000461383 TNXBP22105 4242 aa-0.09□□□□□ -2.42
VCL-203ENST00000461383 PKD1L3Q7Z443 1732 aa-0.1□□□□□ -2.42
VCL-203ENST00000461383 VPS8Q8N3P4 1428 aa-0.1□□□□□ -2.43
VCL-203ENST00000461383 SPTY2D1-AS1A0A0U1RR47 76 aa-0.1□□□□□ -2.43
VCL-203ENST00000461383 PKIAP61925 76 aa-0.1□□□□□ -2.43
VCL-203ENST00000461383 PSENENQ9NZ42 101 aa-0.1□□□□□ -2.43
VCL-203ENST00000461383 HECTD4Q9Y4D8 3996 aa-0.1□□□□□ -2.43
VCL-203ENST00000461383 RGPD4Q7Z3J3 1758 aa-0.11□□□□□ -2.43
VCL-203ENST00000461383 SMIM11AP58511 58 aa-0.11□□□□□ -2.43
VCL-203ENST00000461383 NKTRP30414 1462 aaKnown RBP-0.11□□□□□ -2.43
VCL-203ENST00000461383 ABCC10Q5T3U5 1492 aa-0.11□□□□□ -2.43
VCL-203ENST00000461383 RGPD2P0DJD1 1756 aa-0.11□□□□□ -2.43
VCL-203ENST00000461383 CUX1P39880 1505 aa-0.12□□□□□ -2.43
VCL-203ENST00000461383 M0R2T5 61 aa-0.12□□□□□ -2.43
VCL-203ENST00000461383 GYPAP02724 150 aa-0.12□□□□□ -2.43
VCL-203ENST00000461383 BCORQ6W2J9 1755 aa-0.12□□□□□ -2.43
VCL-203ENST00000461383 ACANP16112 2415 aa-0.13□□□□□ -2.43
VCL-203ENST00000461383 SAMD9Q5K651 1589 aa-0.13□□□□□ -2.43
VCL-203ENST00000461383 IQSEC2Q5JU85 1478 aa-0.13□□□□□ -2.43
VCL-203ENST00000461383 H1FX-AS1Q4G0G2 97 aa-0.13□□□□□ -2.43
VCL-203ENST00000461383 SNHG12Q9BXW3 62 aa-0.13□□□□□ -2.43
VCL-203ENST00000461383 ZANQ9Y493 2812 aa-0.13□□□□□ -2.43
VCL-203ENST00000461383 SLIT1O75093 1534 aa-0.13□□□□□ -2.43
VCL-203ENST00000461383 EPRSP07814 1512 aaKnown RBP-0.13□□□□□ -2.43
VCL-203ENST00000461383 CNOT1A5YKK6 2376 aaKnown RBP-0.13□□□□□ -2.43
VCL-203ENST00000461383 RGPD3A6NKT7 1758 aaPredicted RBP-0.14□□□□□ -2.43
VCL-203ENST00000461383 CCL22O00626 93 aa-0.14□□□□□ -2.43
VCL-203ENST00000461383 IGLC2P0DOY2 106 aa-0.14□□□□□ -2.43
VCL-203ENST00000461383 IGLC3P0DOY3 106 aa-0.14□□□□□ -2.43
VCL-203ENST00000461383 PEA15Q15121 130 aa-0.14□□□□□ -2.43
VCL-203ENST00000461383 DEFB112Q30KQ8 113 aa-0.14□□□□□ -2.43
VCL-203ENST00000461383 HEPN1Q6WQI6 88 aa-0.14□□□□□ -2.43
VCL-203ENST00000461383 MRPL34Q9BQ48 92 aaKnown RBP-0.14□□□□□ -2.43
VCL-203ENST00000461383 FLNBO75369 2602 aaKnown RBP-0.14□□□□□ -2.43
VCL-203ENST00000461383 LRP2P98164 4655 aa-0.14□□□□□ -2.43
VCL-203ENST00000461383 FANCAO15360 1455 aa-0.15□□□□□ -2.43
VCL-203ENST00000461383 ATP10BO94823 1461 aa-0.15□□□□□ -2.43
VCL-203ENST00000461383 Q9H521 79 aa-0.15□□□□□ -2.43
VCL-203ENST00000461383 PRKDCP78527 4128 aaKnown RBP-0.16□□□□□ -2.43
VCL-203ENST00000461383 HIGD1BQ9P298 99 aa-0.16□□□□□ -2.44
VCL-203ENST00000461383 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.16□□□□□ -2.44
VCL-203ENST00000461383 STAB1Q9NY15 2570 aa-0.16□□□□□ -2.44
VCL-203ENST00000461383 CLIP1P30622 1438 aa-0.17□□□□□ -2.44
VCL-203ENST00000461383 UBE2D4Q9Y2X8 147 aa-0.17□□□□□ -2.44
VCL-203ENST00000461383 SETXQ7Z333 2677 aaKnown RBP-0.17□□□□□ -2.44
VCL-203ENST00000461383 KNL1Q8NG31 2342 aa-0.18□□□□□ -2.44
VCL-203ENST00000461383 QSER1Q2KHR3 1735 aa-0.18□□□□□ -2.44
VCL-203ENST00000461383 MACF1Q9UPN3 7388 aaKnown RBP-0.18□□□□□ -2.44
VCL-203ENST00000461383 HMGN2P05204 90 aaKnown RBP-0.18□□□□□ -2.44
VCL-203ENST00000461383 SPRR2BP35325 72 aa-0.18□□□□□ -2.44
VCL-203ENST00000461383 PLGLAQ15195 96 aa-0.19□□□□□ -2.44
VCL-203ENST00000461383 C20orf78Q9BR46 151 aa-0.19□□□□□ -2.44
VCL-203ENST00000461383 CDKN2A-AS1Q9UH64 79 aa-0.19□□□□□ -2.44
VCL-203ENST00000461383 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.19□□□□□ -2.44
VCL-203ENST00000461383 CCNB3Q8WWL7 1395 aa-0.19□□□□□ -2.44
VCL-203ENST00000461383 MYO3AQ8NEV4 1616 aa-0.2□□□□□ -2.44
VCL-203ENST00000461383 UBR1Q8IWV7 1749 aa-0.2□□□□□ -2.44
VCL-203ENST00000461383 A0A1B0GUT8 65 aa-0.2□□□□□ -2.44
VCL-203ENST00000461383 DEFB135Q30KP9 77 aa-0.2□□□□□ -2.44
VCL-203ENST00000461383 NMSQ5H8A3 153 aa-0.2□□□□□ -2.44
VCL-203ENST00000461383 LRP1BQ9NZR2 4599 aa-0.21□□□□□ -2.44
VCL-203ENST00000461383 CYB5AP00167 134 aa-0.21□□□□□ -2.44
VCL-203ENST00000461383 RPL38P63173 70 aaKnown RBP-0.21□□□□□ -2.44
VCL-203ENST00000461383 ALKQ9UM73 1620 aa-0.21□□□□□ -2.44
VCL-203ENST00000461383 COX7BP24311 80 aa-0.22□□□□□ -2.44
VCL-203ENST00000461383 C9orf62Q8N4C0 152 aa-0.22□□□□□ -2.44
VCL-203ENST00000461383 V9GYS6 101 aa-0.22□□□□□ -2.44
VCL-203ENST00000461383 PCNX1Q96RV3 2341 aa-0.22□□□□□ -2.45
VCL-203ENST00000461383 COL6A3P12111 3177 aa-0.22□□□□□ -2.45
VCL-203ENST00000461383 TENM2Q9NT68 2774 aa-0.23□□□□□ -2.45
VCL-203ENST00000461383 IQCF6A8MYZ5 107 aa-0.23□□□□□ -2.45
VCL-203ENST00000461383 KRTAP6-1Q3LI64 71 aa-0.23□□□□□ -2.45
VCL-203ENST00000461383 PYY3Q5JQD4 70 aa-0.23□□□□□ -2.45
VCL-203ENST00000461383 GAFA1Q96PS6 74 aa-0.23□□□□□ -2.45
VCL-203ENST00000461383 TROQ12816 1431 aaPredicted RBP-0.23□□□□□ -2.45
VCL-203ENST00000461383 SUPT6HQ7KZ85 1726 aaKnown RBP-0.24□□□□□ -2.45
VCL-203ENST00000461383 WFDC13Q8IUB5 93 aa-0.24□□□□□ -2.45
VCL-203ENST00000461383 CEP162Q5TB80 1403 aa-0.24□□□□□ -2.45
VCL-203ENST00000461383 MAGI2Q86UL8 1455 aa-0.24□□□□□ -2.45
VCL-203ENST00000461383 LRRC7Q96NW7 1537 aa-0.24□□□□□ -2.45
VCL-203ENST00000461383 PDE4DIPQ5VU43 2346 aa-0.25□□□□□ -2.45
VCL-203ENST00000461383 LELP1Q5T871 98 aa-0.25□□□□□ -2.45
VCL-203ENST00000461383 NBASA2RRP1 2371 aa-0.26□□□□□ -2.45
VCL-203ENST00000461383 RGPD8O14715 1765 aaPredicted RBP-0.26□□□□□ -2.45
VCL-203ENST00000461383 LTN1O94822 1766 aa-0.26□□□□□ -2.45
VCL-203ENST00000461383 RGPD5Q99666 1765 aa-0.26□□□□□ -2.45
VCL-203ENST00000461383 RGPD1P0DJD0 1748 aa-0.26□□□□□ -2.45
VCL-203ENST00000461383 PREX1Q8TCU6 1659 aa-0.26□□□□□ -2.45
VCL-203ENST00000461383 NEXMIFQ5QGS0 1516 aa-0.26□□□□□ -2.45
VCL-203ENST00000461383 LRRC9Q6ZRR7 1453 aa-0.26□□□□□ -2.45
VCL-203ENST00000461383 S100A16Q96FQ6 103 aaKnown RBP-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms