RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 MAP3K1Q13233 1512 aa0.8□□□□□ -2.28
SPTLC1-203ENST00000461132 TMEM131LA2VDJ0 1609 aa0.8□□□□□ -2.28
SPTLC1-203ENST00000461132 PTPN23Q9H3S7 1636 aa0.8□□□□□ -2.28
SPTLC1-203ENST00000461132 SPINK4O60575 86 aa0.8□□□□□ -2.28
SPTLC1-203ENST00000461132 DEFA5Q01523 94 aa0.8□□□□□ -2.28
SPTLC1-203ENST00000461132 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
SPTLC1-203ENST00000461132 NCOA2Q15596 1464 aa0.8□□□□□ -2.28
SPTLC1-203ENST00000461132 SPTBN2O15020 2390 aa0.79□□□□□ -2.28
SPTLC1-203ENST00000461132 SLIT1O75093 1534 aa0.79□□□□□ -2.28
SPTLC1-203ENST00000461132 COL14A1Q05707 1796 aaKnown RBP0.78□□□□□ -2.28
SPTLC1-203ENST00000461132 DEFB109BQ30KR1 87 aa0.78□□□□□ -2.28
SPTLC1-203ENST00000461132 FXYD6Q9H0Q3 95 aa0.78□□□□□ -2.28
SPTLC1-203ENST00000461132 RGPD8O14715 1765 aaPredicted RBP0.78□□□□□ -2.29
SPTLC1-203ENST00000461132 RGPD5Q99666 1765 aa0.78□□□□□ -2.29
SPTLC1-203ENST00000461132 USF3Q68DE3 2245 aa0.77□□□□□ -2.29
SPTLC1-203ENST00000461132 C2CD3Q4AC94 2353 aa0.77□□□□□ -2.29
SPTLC1-203ENST00000461132 SPRR1BP22528 89 aa0.77□□□□□ -2.29
SPTLC1-203ENST00000461132 SPRR1AP35321 89 aa0.77□□□□□ -2.29
SPTLC1-203ENST00000461132 MRPL34Q9BQ48 92 aaKnown RBP0.77□□□□□ -2.29
SPTLC1-203ENST00000461132 IFI6P09912 130 aa0.76□□□□□ -2.29
SPTLC1-203ENST00000461132 RGPD2P0DJD1 1756 aa0.75□□□□□ -2.29
SPTLC1-203ENST00000461132 PIK3C2BO00750 1634 aa0.75□□□□□ -2.29
SPTLC1-203ENST00000461132 F8P00451 2351 aa0.75□□□□□ -2.29
SPTLC1-203ENST00000461132 HEPN1Q6WQI6 88 aa0.75□□□□□ -2.29
SPTLC1-203ENST00000461132 DEFB105AQ8NG35 78 aa0.75□□□□□ -2.29
SPTLC1-203ENST00000461132 APLNQ9ULZ1 77 aa0.75□□□□□ -2.29
SPTLC1-203ENST00000461132 ABCA12Q86UK0 2595 aa0.74□□□□□ -2.29
SPTLC1-203ENST00000461132 CACNA1EQ15878 2313 aa0.74□□□□□ -2.29
SPTLC1-203ENST00000461132 PTPRQQ9UMZ3 2332 aa0.74□□□□□ -2.29
SPTLC1-203ENST00000461132 H3BVH4 76 aa0.74□□□□□ -2.29
SPTLC1-203ENST00000461132 PRH1P02810 166 aa0.74□□□□□ -2.29
SPTLC1-203ENST00000461132 NREPQ16612 68 aa0.74□□□□□ -2.29
SPTLC1-203ENST00000461132 CDKN2A-AS1Q9UH64 79 aa0.74□□□□□ -2.29
SPTLC1-203ENST00000461132 CCDC88BA6NC98 1476 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 TNCP24821 2201 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 LTN1O94822 1766 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 RGPD1P0DJD0 1748 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 QSER1Q2KHR3 1735 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 FMN2Q9NZ56 1722 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 COX6B2Q6YFQ2 88 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 SMR3AQ99954 134 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 ABCA8O94911 1581 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 MAGI3Q5TCQ9 1506 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 DUOX2Q9NRD8 1548 aa0.73□□□□□ -2.29
SPTLC1-203ENST00000461132 ANKRD17O75179 2603 aaKnown RBP0.72□□□□□ -2.29
SPTLC1-203ENST00000461132 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
SPTLC1-203ENST00000461132 UGGT2Q9NYU1 1516 aa0.72□□□□□ -2.29
SPTLC1-203ENST00000461132 PTPRZ1P23471 2315 aaPredicted RBP0.72□□□□□ -2.29
SPTLC1-203ENST00000461132 NOTCH1P46531 2555 aa0.72□□□□□ -2.29
SPTLC1-203ENST00000461132 ANKRD50Q9ULJ7 1429 aa0.72□□□□□ -2.29
SPTLC1-203ENST00000461132 TPRP12270 2363 aaKnown RBP0.71□□□□□ -2.3
SPTLC1-203ENST00000461132 TSC2P49815 1807 aa0.71□□□□□ -2.3
SPTLC1-203ENST00000461132 U3KQA8 63 aa0.71□□□□□ -2.3
SPTLC1-203ENST00000461132 PPRC1Q5VV67 1664 aaKnown RBP0.71□□□□□ -2.3
SPTLC1-203ENST00000461132 SCN11AQ9UI33 1791 aa0.7□□□□□ -2.3
SPTLC1-203ENST00000461132 NDUFA4O00483 81 aa0.7□□□□□ -2.3
SPTLC1-203ENST00000461132 USP32Q8NFA0 1604 aa0.7□□□□□ -2.3
SPTLC1-203ENST00000461132 FBN2P35556 2912 aa0.7□□□□□ -2.3
SPTLC1-203ENST00000461132 BCORQ6W2J9 1755 aa0.7□□□□□ -2.3
SPTLC1-203ENST00000461132 TENM3Q9P273 2699 aa0.7□□□□□ -2.3
SPTLC1-203ENST00000461132 PKDREJQ9NTG1 2253 aa0.69□□□□□ -2.3
SPTLC1-203ENST00000461132 MEGF8Q7Z7M0 2845 aa0.69□□□□□ -2.3
SPTLC1-203ENST00000461132 GNG13Q9P2W3 67 aa0.69□□□□□ -2.3
SPTLC1-203ENST00000461132 BDP1A6H8Y1 2624 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 LCE6AA0A183 80 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 POLR1AO95602 1720 aaPredicted RBP0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 ATXN8Q156A1 80 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 H1FX-AS1Q4G0G2 97 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 CEP170BQ9Y4F5 1589 aaPredicted RBP0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 POLQO75417 2590 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 ARFGEF2Q9Y6D5 1785 aa0.68□□□□□ -2.3
SPTLC1-203ENST00000461132 SMIM31A0A1B0GVY4 71 aa0.67□□□□□ -2.3
SPTLC1-203ENST00000461132 KLK9Q2XQG4 91 aa0.67□□□□□ -2.3
SPTLC1-203ENST00000461132 SPTBN1Q01082 2364 aaKnown RBP0.67□□□□□ -2.3
SPTLC1-203ENST00000461132 TIAM2Q8IVF5 1701 aa0.67□□□□□ -2.3
SPTLC1-203ENST00000461132 LRRIQ1Q96JM4 1722 aa0.67□□□□□ -2.3
SPTLC1-203ENST00000461132 MYO5CQ9NQX4 1742 aa0.67□□□□□ -2.3
SPTLC1-203ENST00000461132 PREX1Q8TCU6 1659 aa0.66□□□□□ -2.3
SPTLC1-203ENST00000461132 MRPL33O75394 65 aaKnown RBP0.66□□□□□ -2.3
SPTLC1-203ENST00000461132 AKAP6Q13023 2319 aa0.65□□□□□ -2.3
SPTLC1-203ENST00000461132 C3orf79P0CE67 100 aa0.65□□□□□ -2.31
SPTLC1-203ENST00000461132 RALGAPBQ86X10 1494 aa0.65□□□□□ -2.31
SPTLC1-203ENST00000461132 NWD1Q149M9 1564 aa0.65□□□□□ -2.31
SPTLC1-203ENST00000461132 UBL5Q9BZL1 73 aa0.64□□□□□ -2.31
SPTLC1-203ENST00000461132 CFAP43Q8NDM7 1665 aa0.64□□□□□ -2.31
SPTLC1-203ENST00000461132 ZNF469Q96JG9 3925 aaPredicted RBP0.64□□□□□ -2.31
SPTLC1-203ENST00000461132 DOT1LQ8TEK3 1739 aa0.64□□□□□ -2.31
SPTLC1-203ENST00000461132 LMTK2Q8IWU2 1503 aa0.64□□□□□ -2.31
SPTLC1-203ENST00000461132 CD163L1Q9NR16 1453 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 LOC730098B7Z3J9 87 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 NDUFA3O95167 84 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 WFDC13Q8IUB5 93 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 PRO3102Q9H379 93 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 HILPDAQ9Y5L2 63 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 IQGAP3Q86VI3 1631 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 CELSR2Q9HCU4 2923 aa0.63□□□□□ -2.31
SPTLC1-203ENST00000461132 HFM1A2PYH4 1435 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms