RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 COL6A3P12111 3177 aa8.25□□□□□ -1.09
CPNE6-202ENST00000460657 FREM2Q5SZK8 3169 aa8.25□□□□□ -1.09
CPNE6-202ENST00000460657 C6orf48Q9UBA6 75 aa8.25□□□□□ -1.09
CPNE6-202ENST00000460657 LOC107984640A0A0U1RRK4 108 aa8.24□□□□□ -1.09
CPNE6-202ENST00000460657 NHLRC4P0CG21 123 aaPredicted RBP8.24□□□□□ -1.09
CPNE6-202ENST00000460657 KRTAP1-3Q8IUG1 177 aa8.24□□□□□ -1.09
CPNE6-202ENST00000460657 Q8NAQ8 132 aa8.24□□□□□ -1.09
CPNE6-202ENST00000460657 LINC01547P58512 204 aaPredicted RBP8.24□□□□□ -1.09
CPNE6-202ENST00000460657 NDUFB1O75438 58 aa8.23□□□□□ -1.09
CPNE6-202ENST00000460657 ADGRG4Q8IZF6 3080 aa8.23□□□□□ -1.09
CPNE6-202ENST00000460657 CRYGAP11844 174 aa8.23□□□□□ -1.09
CPNE6-202ENST00000460657 MYO15AQ9UKN7 3530 aa8.23□□□□□ -1.09
CPNE6-202ENST00000460657 FLNAP21333 2647 aaKnown RBP8.23□□□□□ -1.09
CPNE6-202ENST00000460657 LINC00612Q8N6U2 182 aa8.22□□□□□ -1.09
CPNE6-202ENST00000460657 TNRC18O15417 2968 aaPredicted RBP8.22□□□□□ -1.09
CPNE6-202ENST00000460657 USP34Q70CQ2 3546 aa8.22□□□□□ -1.09
CPNE6-202ENST00000460657 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
CPNE6-202ENST00000460657 B9D2Q9BPU9 175 aa8.21□□□□□ -1.1
CPNE6-202ENST00000460657 H3BNG1 76 aa8.2□□□□□ -1.1
CPNE6-202ENST00000460657 SVIPQ8NHG7 77 aa8.2□□□□□ -1.1
CPNE6-202ENST00000460657 CXCL6P80162 114 aa8.2□□□□□ -1.1
CPNE6-202ENST00000460657 HECTD1Q9ULT8 2610 aa8.2□□□□□ -1.1
CPNE6-202ENST00000460657 KIAA0087Q14695 138 aa8.2□□□□□ -1.1
CPNE6-202ENST00000460657 C5orf47Q569G3 176 aa8.19□□□□□ -1.1
CPNE6-202ENST00000460657 SPATA3Q8NHX4 192 aa8.19□□□□□ -1.1
CPNE6-202ENST00000460657 C1orf137Q5JT78 98 aa8.19□□□□□ -1.1
CPNE6-202ENST00000460657 Q6ZQT0 140 aa8.19□□□□□ -1.1
CPNE6-202ENST00000460657 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.19□□□□□ -1.1
CPNE6-202ENST00000460657 GVQW2A0A096LPI5 108 aaPredicted RBP8.19□□□□□ -1.1
CPNE6-202ENST00000460657 LOC110117498A0A087WWA1 95 aa8.18□□□□□ -1.1
CPNE6-202ENST00000460657 TRBV7-6A0A0J9YX20 115 aa8.18□□□□□ -1.1
CPNE6-202ENST00000460657 ESRGQ1W209 222 aa8.18□□□□□ -1.1
CPNE6-202ENST00000460657 LINC01556Q5JQF7 62 aa8.18□□□□□ -1.1
CPNE6-202ENST00000460657 PRB2P02812 416 aaPredicted RBP8.17□□□□□ -1.1
CPNE6-202ENST00000460657 ELOF1P60002 83 aaKnown RBP8.17□□□□□ -1.1
CPNE6-202ENST00000460657 MAP1AP78559 2803 aaPredicted RBP8.17□□□□□ -1.1
CPNE6-202ENST00000460657 NDUFS5O43920 106 aa8.17□□□□□ -1.1
CPNE6-202ENST00000460657 PRYO14603 147 aa8.17□□□□□ -1.1
CPNE6-202ENST00000460657 IGLV6-57P01721 117 aa8.16□□□□□ -1.1
CPNE6-202ENST00000460657 H0Y9J4 135 aa8.16□□□□□ -1.1
CPNE6-202ENST00000460657 ITPR3Q14573 2671 aa8.16□□□□□ -1.1
CPNE6-202ENST00000460657 A0A096LNI7 61 aa8.15□□□□□ -1.1
CPNE6-202ENST00000460657 BCE1O60756 84 aa8.15□□□□□ -1.1
CPNE6-202ENST00000460657 SERP1Q9Y6X1 66 aa8.15□□□□□ -1.1
CPNE6-202ENST00000460657 KRTAP10-3P60369 221 aa8.14□□□□□ -1.11
CPNE6-202ENST00000460657 REG3GQ6UW15 175 aa8.14□□□□□ -1.11
CPNE6-202ENST00000460657 C7orf33Q8WU49 177 aa8.14□□□□□ -1.11
CPNE6-202ENST00000460657 KRTAP1-1Q07627 177 aa8.14□□□□□ -1.11
CPNE6-202ENST00000460657 MRPL55Q7Z7F7 128 aaKnown RBP8.13□□□□□ -1.11
CPNE6-202ENST00000460657 PRR34Q9NV39 138 aa8.13□□□□□ -1.11
CPNE6-202ENST00000460657 FAM30AQ9NZY2 134 aa8.12□□□□□ -1.11
CPNE6-202ENST00000460657 F8P00451 2351 aa8.12□□□□□ -1.11
CPNE6-202ENST00000460657 KALRNO60229 2985 aa8.12□□□□□ -1.11
CPNE6-202ENST00000460657 SMIM26A0A096LP01 95 aa8.11□□□□□ -1.11
CPNE6-202ENST00000460657 VPREB1P12018 145 aa8.11□□□□□ -1.11
CPNE6-202ENST00000460657 C9orf129Q5T035 196 aaKnown RBP8.11□□□□□ -1.11
CPNE6-202ENST00000460657 WFDC13Q8IUB5 93 aa8.11□□□□□ -1.11
CPNE6-202ENST00000460657 MPLKIPQ8TAP9 179 aa8.11□□□□□ -1.11
CPNE6-202ENST00000460657 DMXL2Q8TDJ6 3036 aa8.11□□□□□ -1.11
CPNE6-202ENST00000460657 CR1P17927 2039 aa8.1□□□□□ -1.11
CPNE6-202ENST00000460657 TMEM254Q8TBM7 123 aa8.1□□□□□ -1.11
CPNE6-202ENST00000460657 RPS28P62857 69 aaKnown RBP8.1□□□□□ -1.11
CPNE6-202ENST00000460657 C22orf24Q9Y442 160 aa8.1□□□□□ -1.11
CPNE6-202ENST00000460657 LOC400499M0QZD8 3231 aa8.09□□□□□ -1.11
CPNE6-202ENST00000460657 Q8N9L7 120 aa8.09□□□□□ -1.11
CPNE6-202ENST00000460657 BRK1Q8WUW1 75 aa8.09□□□□□ -1.11
CPNE6-202ENST00000460657 LINC00167Q96N53 147 aa8.09□□□□□ -1.11
CPNE6-202ENST00000460657 LRBAP50851 2863 aa8.09□□□□□ -1.11
CPNE6-202ENST00000460657 ATMQ13315 3056 aa8.09□□□□□ -1.12
CPNE6-202ENST00000460657 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
CPNE6-202ENST00000460657 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
CPNE6-202ENST00000460657 OBSCN-AS1Q96MR7 158 aa8.06□□□□□ -1.12
CPNE6-202ENST00000460657 Q6ZRP5 223 aa8.06□□□□□ -1.12
CPNE6-202ENST00000460657 LINC00474Q9P2X8 69 aa8.06□□□□□ -1.12
CPNE6-202ENST00000460657 A0A1B0GW54 56 aa8.05□□□□□ -1.12
CPNE6-202ENST00000460657 IGSF10Q6WRI0 2623 aa8.05□□□□□ -1.12
CPNE6-202ENST00000460657 TACC2O95359 2948 aa8.05□□□□□ -1.12
CPNE6-202ENST00000460657 Q6ZRX8 168 aa8.04□□□□□ -1.12
CPNE6-202ENST00000460657 LINC00528Q8N1L1 170 aa8.03□□□□□ -1.12
CPNE6-202ENST00000460657 A0A087WSZ3 146 aa8.03□□□□□ -1.12
CPNE6-202ENST00000460657 USP24Q9UPU5 2620 aa8.03□□□□□ -1.12
CPNE6-202ENST00000460657 Q9BRP9 147 aa8.03□□□□□ -1.12
CPNE6-202ENST00000460657 DMXL1Q9Y485 3027 aa8.03□□□□□ -1.12
CPNE6-202ENST00000460657 DNAH10OSP0CZ25 163 aa8.02□□□□□ -1.13
CPNE6-202ENST00000460657 PRLHP81277 87 aa8.02□□□□□ -1.13
CPNE6-202ENST00000460657 PRR4Q16378 134 aa8.02□□□□□ -1.13
CPNE6-202ENST00000460657 C15orf56Q8N910 161 aa8.01□□□□□ -1.13
CPNE6-202ENST00000460657 KRTAP24-1Q3LI83 254 aa8.01□□□□□ -1.13
CPNE6-202ENST00000460657 Q8NBF4 154 aa8.01□□□□□ -1.13
CPNE6-202ENST00000460657 CHD6Q8TD26 2715 aa8□□□□□ -1.13
CPNE6-202ENST00000460657 LINC00588Q9Y4M8 146 aa8□□□□□ -1.13
CPNE6-202ENST00000460657 ATRQ13535 2644 aa8□□□□□ -1.13
CPNE6-202ENST00000460657 ZNF706Q9Y5V0 76 aaPredicted RBP8□□□□□ -1.13
CPNE6-202ENST00000460657 TM2D3Q9BRN9 247 aa8□□□□□ -1.13
CPNE6-202ENST00000460657 KCNQ1DNQ9H478 68 aa8□□□□□ -1.13
CPNE6-202ENST00000460657 TRBV7-4A0A0J9YYF1 115 aa7.99□□□□□ -1.13
CPNE6-202ENST00000460657 FLNCQ14315 2725 aa7.99□□□□□ -1.13
CPNE6-202ENST00000460657 HCG22E2RYF7 251 aa7.99□□□□□ -1.13
CPNE6-202ENST00000460657 M0R2N4 97 aa7.99□□□□□ -1.13
CPNE6-202ENST00000460657 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms