RNA–Protein interactions for RNA: ENST00000460601.5

NELFCD-201, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,137 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-201ENST00000460601 SYCNQ0VAF6 134 aa10.99□□□□□ -0.65
NELFCD-201ENST00000460601 ALMS1Q8TCU4 4167 aa10.98□□□□□ -0.65
NELFCD-201ENST00000460601 LRCOL1A6NCL2 159 aa10.98□□□□□ -0.65
NELFCD-201ENST00000460601 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.97□□□□□ -0.65
NELFCD-201ENST00000460601 TRBV30A0A0K0K1B3 111 aa10.97□□□□□ -0.65
NELFCD-201ENST00000460601 COX17Q14061 63 aa10.97□□□□□ -0.65
NELFCD-201ENST00000460601 IFITM1P13164 125 aa10.96□□□□□ -0.65
NELFCD-201ENST00000460601 CARD19Q96LW7 228 aa10.96□□□□□ -0.65
NELFCD-201ENST00000460601 SND1-IT1Q9HBX3 110 aa10.96□□□□□ -0.65
NELFCD-201ENST00000460601 LYRM7Q5U5X0 104 aa10.96□□□□□ -0.66
NELFCD-201ENST00000460601 XAGE1AQ9HD64 81 aa10.96□□□□□ -0.66
NELFCD-201ENST00000460601 Q8NDZ9 215 aa10.95□□□□□ -0.66
NELFCD-201ENST00000460601 PGPEP1Q9NXJ5 209 aa10.95□□□□□ -0.66
NELFCD-201ENST00000460601 CDIP1Q9H305 208 aa10.94□□□□□ -0.66
NELFCD-201ENST00000460601 Q6ZRP5 223 aa10.94□□□□□ -0.66
NELFCD-201ENST00000460601 SMCPP49901 116 aaPredicted RBP10.93□□□□□ -0.66
NELFCD-201ENST00000460601 GAGE2EQ4V326 116 aa10.93□□□□□ -0.66
NELFCD-201ENST00000460601 GAGE2DQ9UEU5 116 aa10.93□□□□□ -0.66
NELFCD-201ENST00000460601 FUSP35637 526 aaKnown RBP eCLIP10.93□□□□□ -0.662e-6■■■■□ 20.8
NELFCD-201ENST00000460601 PRR3P79522 188 aaKnown RBP10.93□□□□□ -0.66
NELFCD-201ENST00000460601 C1orf134Q5TEV5 83 aa10.93□□□□□ -0.66
NELFCD-201ENST00000460601 SACSQ9NZJ4 4579 aa10.92□□□□□ -0.66
NELFCD-201ENST00000460601 NDUFC2-KCTD14E9PQ53 114 aa10.91□□□□□ -0.66
NELFCD-201ENST00000460601 IGKV2-28A0A075B6P5 120 aa10.91□□□□□ -0.66
NELFCD-201ENST00000460601 IGKV2D-28P01615 120 aa10.91□□□□□ -0.66
NELFCD-201ENST00000460601 LINC01620Q4KN68 170 aa10.91□□□□□ -0.66
NELFCD-201ENST00000460601 PPDPFLQ8WWR9 84 aa10.91□□□□□ -0.66
NELFCD-201ENST00000460601 DNAH6Q9C0G6 4158 aa10.9□□□□□ -0.66
NELFCD-201ENST00000460601 H7C2G1 150 aa10.9□□□□□ -0.66
NELFCD-201ENST00000460601 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
NELFCD-201ENST00000460601 FRAS1Q86XX4 4008 aa10.9□□□□□ -0.66
NELFCD-201ENST00000460601 TRBV20-1A0A075B6N2 111 aa10.9□□□□□ -0.67
NELFCD-201ENST00000460601 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.9□□□□□ -0.67
NELFCD-201ENST00000460601 TSPAN13O95857 204 aa10.9□□□□□ -0.67
NELFCD-201ENST00000460601 TEN1Q86WV5 123 aa10.9□□□□□ -0.67
NELFCD-201ENST00000460601 F8WDY8 70 aa10.89□□□□□ -0.67
NELFCD-201ENST00000460601 KMT2CQ8NEZ4 4911 aaKnown RBP10.89□□□□□ -0.67
NELFCD-201ENST00000460601 A0A087WTM6 91 aa10.88□□□□□ -0.67
NELFCD-201ENST00000460601 A0A0B4J2C4 111 aa10.88□□□□□ -0.67
NELFCD-201ENST00000460601 COPS9Q8WXC6 57 aa10.88□□□□□ -0.67
NELFCD-201ENST00000460601 PRO1854Q9UHT4 67 aa10.88□□□□□ -0.67
NELFCD-201ENST00000460601 PSMB2P49721 201 aa10.88□□□□□ -0.67
NELFCD-201ENST00000460601 LINC00337Q8N6G1 96 aa10.88□□□□□ -0.67
NELFCD-201ENST00000460601 Q8N814 137 aa10.88□□□□□ -0.67
NELFCD-201ENST00000460601 LOC107984156A0A0G2JMH3 177 aa10.87□□□□□ -0.67
NELFCD-201ENST00000460601 CNBPP62633 177 aaKnown RBP10.87□□□□□ -0.67
NELFCD-201ENST00000460601 ARL17AQ8IVW1 177 aa10.87□□□□□ -0.67
NELFCD-201ENST00000460601 C9orf129Q5T035 196 aaKnown RBP10.87□□□□□ -0.67
NELFCD-201ENST00000460601 DNAH17Q9UFH2 4485 aa10.87□□□□□ -0.67
NELFCD-201ENST00000460601 C14orf177Q52M58 125 aa10.86□□□□□ -0.67
NELFCD-201ENST00000460601 M0QXV9 152 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 NCR3O14931 201 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 MT-ATP8P03928 68 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 TNP2Q05952 138 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 RTL8CO15255 209 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 RPL13AP40429 203 aaKnown RBP10.85□□□□□ -0.67
NELFCD-201ENST00000460601 XGP55808 180 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 PPDPFQ9H3Y8 114 aa10.85□□□□□ -0.67
NELFCD-201ENST00000460601 HECTD4Q9Y4D8 3996 aa10.84□□□□□ -0.67
NELFCD-201ENST00000460601 TLX1NBP0CAT3 122 aa10.84□□□□□ -0.67
NELFCD-201ENST00000460601 FAM168BA1KXE4 195 aa10.82□□□□□ -0.68
NELFCD-201ENST00000460601 TCL1BO95988 128 aa10.82□□□□□ -0.68
NELFCD-201ENST00000460601 Q1RN00 199 aa10.82□□□□□ -0.68
NELFCD-201ENST00000460601 FAT2Q9NYQ8 4349 aa10.82□□□□□ -0.68
NELFCD-201ENST00000460601 A0A096LNI7 61 aa10.81□□□□□ -0.68
NELFCD-201ENST00000460601 IGKV2-24A0A0C4DH68 120 aa10.81□□□□□ -0.68
NELFCD-201ENST00000460601 LCE6AA0A183 80 aa10.81□□□□□ -0.68
NELFCD-201ENST00000460601 SERTAD4-AS1Q5TG53 156 aa10.81□□□□□ -0.68
NELFCD-201ENST00000460601 LOC107984640A0A0U1RRK4 108 aa10.8□□□□□ -0.68
NELFCD-201ENST00000460601 NDUFC2O95298 119 aa10.8□□□□□ -0.68
NELFCD-201ENST00000460601 OR13C6PQ8NH95 151 aa10.8□□□□□ -0.68
NELFCD-201ENST00000460601 CHTF8P0CG12 524 aa10.79□□□□□ -0.68
NELFCD-201ENST00000460601 C9orf163Q8N9P6 203 aa10.79□□□□□ -0.68
NELFCD-201ENST00000460601 VPREB1P12018 145 aa10.79□□□□□ -0.68
NELFCD-201ENST00000460601 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
NELFCD-201ENST00000460601 ANKRD29Q8N6D5 301 aa10.78□□□□□ -0.68
NELFCD-201ENST00000460601 TRAV13-2A0A0B4J235 113 aa10.78□□□□□ -0.68
NELFCD-201ENST00000460601 TRIAP1O43715 76 aa10.77□□□□□ -0.69
NELFCD-201ENST00000460601 LINC01600Q96MT4 127 aa10.77□□□□□ -0.69
NELFCD-201ENST00000460601 ANAPC13Q9BS18 74 aa10.76□□□□□ -0.69
NELFCD-201ENST00000460601 PANO1I0J062 215 aa10.76□□□□□ -0.69
NELFCD-201ENST00000460601 SCGB1C2P0DMR2 95 aa10.76□□□□□ -0.69
NELFCD-201ENST00000460601 C16orf90A8MZG2 172 aa10.75□□□□□ -0.69
NELFCD-201ENST00000460601 SLC25A20O43772 301 aa10.75□□□□□ -0.69
NELFCD-201ENST00000460601 SDIM1Q6ZPB5 146 aa10.75□□□□□ -0.69
NELFCD-201ENST00000460601 FAM19A5Q7Z5A7 132 aaPredicted RBP10.75□□□□□ -0.69
NELFCD-201ENST00000460601 SMIM11BQ8TCY0 68 aa10.75□□□□□ -0.69
NELFCD-201ENST00000460601 DNAH11Q96DT5 4516 aa10.75□□□□□ -0.69
NELFCD-201ENST00000460601 RYR2Q92736 4967 aa10.75□□□□□ -0.69
NELFCD-201ENST00000460601 KRTAP10-2P60368 255 aa10.74□□□□□ -0.69
NELFCD-201ENST00000460601 TRBV10-3A0A0K0K1G6 114 aa10.73□□□□□ -0.69
NELFCD-201ENST00000460601 S100A7L2Q5SY68 101 aa10.73□□□□□ -0.69
NELFCD-201ENST00000460601 IGLV5-52A0A0A0MRZ9 124 aa10.72□□□□□ -0.69
NELFCD-201ENST00000460601 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
NELFCD-201ENST00000460601 Q6Q795 121 aa10.72□□□□□ -0.69
NELFCD-201ENST00000460601 PKD1P98161 4303 aa10.72□□□□□ -0.69
NELFCD-201ENST00000460601 DNAH5Q8TE73 4624 aa10.71□□□□□ -0.69
NELFCD-201ENST00000460601 C9JAW5 83 aa10.71□□□□□ -0.69
NELFCD-201ENST00000460601 TMEM126AQ9H061 195 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms