RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 A0A0G2JND7 137 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 H3BNG1 76 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 M0R129 80 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 AIPO00170 330 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 GEMIN2O14893 280 aaKnown RBP0.92□□□□□ -2.26
RFC4-211ENST00000460408 SNAPC5O75971 98 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 DPM2O94777 84 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 SPINK8P0C7L1 97 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 DEFB131AP59861 70 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 KHDC3LQ587J8 217 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 Q6AWC8 147 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 LCN15Q6UWW0 184 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 COX6B2Q6YFQ2 88 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 LINC00299Q6ZSB3 139 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 ATOH7Q8N100 152 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 HIST3H2BBQ8N257 126 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 TTC9CQ8N5M4 171 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 OR5D14Q8NGL3 314 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 SLC25A21Q9BQT8 299 aaPredicted RBP0.92□□□□□ -2.26
RFC4-211ENST00000460408 LINC00467Q9BRT7 94 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 Q9H521 79 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 NPVFQ9HCQ7 196 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 CMC2Q9NRP2 79 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 RPRMQ9NS64 109 aa0.92□□□□□ -2.26
RFC4-211ENST00000460408 TRBV7-6A0A0J9YX20 115 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 A0A0J9YY99 117 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 BBIP1A8MTZ0 92 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 M0R378 163 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 NDUFA4O00483 81 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 PDCD5O14737 125 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 TAX1BP3O14907 124 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 YPEL1O60688 119 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 NCR2O95944 276 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 APOC3P02656 99 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 MT-ATP8P03928 68 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 TRGC2P03986 189 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 NMBP08949 121 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 TMBIM6P55061 237 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 SMIM11AP58511 58 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 YPEL3P61236 119 aaPredicted RBP0.91□□□□□ -2.26
RFC4-211ENST00000460408 ZNF846Q147U1 533 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 HMGN3Q15651 99 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 MSMO1Q15800 293 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 RTL8BQ17RB0 113 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 MPV17LQ2QL34 196 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 KLK9Q2XQG4 91 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 VMA21Q3ZAQ7 101 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 ASB16-AS1Q495Z4 193 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 ALKAL2Q6UX46 152 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 IZUMO2Q6UXV1 221 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 Q6ZUT4 128 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 GTF2H5Q6ZYL4 71 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 ARPINQ7Z6K5 226 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 LSM10Q969L4 123 aaKnown RBP0.91□□□□□ -2.26
RFC4-211ENST00000460408 YPEL2Q96QA6 119 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 RHPN1-AS1Q9BWJ2 59 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 TMEM191AQ9H0A3 160 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 TAS2R8Q9NYW2 309 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 KLK9Q9UKQ9 250 aa0.91□□□□□ -2.26
RFC4-211ENST00000460408 TRBV7-1A0A0A6YYK4 115 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 TRAV2A0A0B4J234 112 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 IGHV1-58A0A0C4DH39 117 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 PNMA8CA0A1B0GUJ8 204 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 MCRIP1C9JLW8 97 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 E7EUB6 86 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 H3BQ15 152 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 CFDP00746 253 aaPredicted RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 TCRAP04437 139 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 SLC25A5P05141 298 aaKnown RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 SAA1P0DJI8 122 aaPredicted RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 RNASE3P12724 160 aaKnown RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 HIST1H1DP16402 221 aaKnown RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 ZNF93P35789 620 aaPredicted RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 DEFB1P60022 68 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 QRFPP83859 136 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 Q0VG73 95 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 WFDC2Q14508 124 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 PEA15Q15121 130 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 KRTAP19-6Q3LI70 58 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 PSMG4Q5JS54 123 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 LYRM7Q5U5X0 104 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 Q6ZQT0 140 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 LCA10Q71F78 164 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 PHF5AQ7RTV0 110 aaKnown RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 DEFB107AQ8IZN7 70 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 KCNRGQ8N5I3 272 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 ATP6V0E2Q8NHE4 81 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 Q8TAT8 98 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 BRK1Q8WUW1 75 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 LINC00526Q96FQ7 95 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 CIB3Q96Q77 187 aaPredicted RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 HIST1H2BLQ99880 126 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 AGPAT4-IT1Q9H0P7 198 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 ATG5Q9H1Y0 275 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 TAS2R4Q9NYW5 299 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 RABAC1Q9UI14 185 aa0.9□□□□□ -2.27
RFC4-211ENST00000460408 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
RFC4-211ENST00000460408 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TRBV20-1A0A075B6N2 111 aa0.89□□□□□ -2.27
RFC4-211ENST00000460408 TRAV12-2A0A075B6T6 113 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms