RNA–Protein interactions for RNA: ENST00000459670.2

NEDD9-205, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-205ENST00000459670 DYNC1H1Q14204 4646 aaKnown RBP6.71□□□□□ -1.34
NEDD9-205ENST00000459670 LRP1BQ9NZR2 4599 aa6.7□□□□□ -1.34
NEDD9-205ENST00000459670 A0A0B4J2C4 111 aa6.7□□□□□ -1.34
NEDD9-205ENST00000459670 CFC1BP0CG36 223 aa6.7□□□□□ -1.34
NEDD9-205ENST00000459670 CFC1P0CG37 223 aa6.7□□□□□ -1.34
NEDD9-205ENST00000459670 LINC00158P58513 81 aa6.7□□□□□ -1.34
NEDD9-205ENST00000459670 SRSF9Q13242 221 aaKnown RBP eCLIP6.7□□□□□ -1.34
NEDD9-205ENST00000459670 C9orf129Q5T035 196 aaKnown RBP6.7□□□□□ -1.34
NEDD9-205ENST00000459670 KRTAP7-1Q8IUC3 87 aa6.7□□□□□ -1.34
NEDD9-205ENST00000459670 LCE2BO14633 110 aa6.69□□□□□ -1.34
NEDD9-205ENST00000459670 TAX1BP3O14907 124 aa6.69□□□□□ -1.34
NEDD9-205ENST00000459670 NDUFC2O95298 119 aa6.69□□□□□ -1.34
NEDD9-205ENST00000459670 NPC2P61916 151 aa6.69□□□□□ -1.34
NEDD9-205ENST00000459670 EPM2AB3EWF7 344 aa6.68□□□□□ -1.34
NEDD9-205ENST00000459670 K7ERJ3 54 aa6.68□□□□□ -1.34
NEDD9-205ENST00000459670 VPREB1P12018 145 aa6.68□□□□□ -1.34
NEDD9-205ENST00000459670 RPL24P83731 157 aaKnown RBP6.68□□□□□ -1.34
NEDD9-205ENST00000459670 LBHQ53QV2 105 aaPredicted RBP6.68□□□□□ -1.34
NEDD9-205ENST00000459670 LINC00337Q8N6G1 96 aa6.68□□□□□ -1.34
NEDD9-205ENST00000459670 PLA2G2DQ9UNK4 145 aa6.68□□□□□ -1.34
NEDD9-205ENST00000459670 IGLV5-37A0A075B6J1 123 aa6.67□□□□□ -1.34
NEDD9-205ENST00000459670 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.67□□□□□ -1.34
NEDD9-205ENST00000459670 SDIM1Q6ZPB5 146 aa6.67□□□□□ -1.34
NEDD9-205ENST00000459670 NHP2Q9NX24 153 aaKnown RBP6.67□□□□□ -1.34
NEDD9-205ENST00000459670 A0A096LNI7 61 aa6.66□□□□□ -1.34
NEDD9-205ENST00000459670 LOC107984640A0A0U1RRK4 108 aa6.66□□□□□ -1.34
NEDD9-205ENST00000459670 TMEM238LA0A1B0GVL6 79 aa6.66□□□□□ -1.34
NEDD9-205ENST00000459670 A0A1B0GVY2 172 aa6.66□□□□□ -1.34
NEDD9-205ENST00000459670 A6NJY4 79 aa6.66□□□□□ -1.34
NEDD9-205ENST00000459670 COPS9Q8WXC6 57 aa6.66□□□□□ -1.34
NEDD9-205ENST00000459670 XAGE1AQ9HD64 81 aa6.66□□□□□ -1.34
NEDD9-205ENST00000459670 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.65□□□□□ -1.34
NEDD9-205ENST00000459670 C16orf90A8MZG2 172 aa6.65□□□□□ -1.34
NEDD9-205ENST00000459670 PANO1I0J062 215 aa6.65□□□□□ -1.34
NEDD9-205ENST00000459670 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
NEDD9-205ENST00000459670 BATFQ16520 125 aa6.65□□□□□ -1.34
NEDD9-205ENST00000459670 COL5A1-AS1Q5SY13 56 aa6.65□□□□□ -1.34
NEDD9-205ENST00000459670 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
NEDD9-205ENST00000459670 A6NDN8 102 aa6.64□□□□□ -1.35
NEDD9-205ENST00000459670 SERTAD4-AS1Q5TG53 156 aa6.64□□□□□ -1.35
NEDD9-205ENST00000459670 KRTAP17-1Q9BYP8 105 aa6.64□□□□□ -1.35
NEDD9-205ENST00000459670 APOBP04114 4563 aaKnown RBP6.64□□□□□ -1.35
NEDD9-205ENST00000459670 TSPAN13O95857 204 aa6.63□□□□□ -1.35
NEDD9-205ENST00000459670 RPL18AQ02543 176 aaKnown RBP6.63□□□□□ -1.35
NEDD9-205ENST00000459670 IGLV6-57P01721 117 aa6.62□□□□□ -1.35
NEDD9-205ENST00000459670 FUSP35637 526 aaKnown RBP eCLIP6.62□□□□□ -1.35
NEDD9-205ENST00000459670 PRR3P79522 188 aaKnown RBP6.62□□□□□ -1.35
NEDD9-205ENST00000459670 LINC01620Q4KN68 170 aa6.62□□□□□ -1.35
NEDD9-205ENST00000459670 GAGE2EQ4V326 116 aa6.62□□□□□ -1.35
NEDD9-205ENST00000459670 SPACA4Q8TDM5 124 aa6.62□□□□□ -1.35
NEDD9-205ENST00000459670 GAGE2DQ9UEU5 116 aa6.62□□□□□ -1.35
NEDD9-205ENST00000459670 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
NEDD9-205ENST00000459670 FAM168BA1KXE4 195 aa6.61□□□□□ -1.35
NEDD9-205ENST00000459670 CHTF8P0CG12 524 aa6.61□□□□□ -1.35
NEDD9-205ENST00000459670 Q6ZSA8 131 aa6.61□□□□□ -1.35
NEDD9-205ENST00000459670 A0A1W2PNN7 141 aa6.6□□□□□ -1.35
NEDD9-205ENST00000459670 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
NEDD9-205ENST00000459670 RPL13AP40429 203 aaKnown RBP6.6□□□□□ -1.35
NEDD9-205ENST00000459670 LINC00336Q6ZUF6 198 aa6.6□□□□□ -1.35
NEDD9-205ENST00000459670 PGPEP1Q9NXJ5 209 aa6.6□□□□□ -1.35
NEDD9-205ENST00000459670 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.6□□□□□ -1.35
NEDD9-205ENST00000459670 EPPK1P58107 5090 aaKnown RBP6.59□□□□□ -1.35
NEDD9-205ENST00000459670 TRAV13-2A0A0B4J235 113 aa6.59□□□□□ -1.35
NEDD9-205ENST00000459670 GAGE2BQ13066 116 aa6.59□□□□□ -1.35
NEDD9-205ENST00000459670 PKIGQ9Y2B9 76 aa6.59□□□□□ -1.35
NEDD9-205ENST00000459670 NCR3O14931 201 aa6.58□□□□□ -1.36
NEDD9-205ENST00000459670 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
NEDD9-205ENST00000459670 C7orf33Q8WU49 177 aa6.58□□□□□ -1.36
NEDD9-205ENST00000459670 RAB37Q96AX2 223 aa6.58□□□□□ -1.36
NEDD9-205ENST00000459670 IGLV5-52A0A0A0MRZ9 124 aa6.57□□□□□ -1.36
NEDD9-205ENST00000459670 TRBV10-3A0A0K0K1G6 114 aa6.57□□□□□ -1.36
NEDD9-205ENST00000459670 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
NEDD9-205ENST00000459670 M0R378 163 aa6.57□□□□□ -1.36
NEDD9-205ENST00000459670 TRIAP1O43715 76 aa6.57□□□□□ -1.36
NEDD9-205ENST00000459670 NAA38Q9BRA0 125 aaKnown RBP6.57□□□□□ -1.36
NEDD9-205ENST00000459670 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
NEDD9-205ENST00000459670 A0A1W2PPM0 123 aa6.56□□□□□ -1.36
NEDD9-205ENST00000459670 SPRR1AP35321 89 aa6.56□□□□□ -1.36
NEDD9-205ENST00000459670 SMIM11BQ8TCY0 68 aa6.56□□□□□ -1.36
NEDD9-205ENST00000459670 PLAC8Q9NZF1 115 aa6.56□□□□□ -1.36
NEDD9-205ENST00000459670 H3BUT2 72 aa6.55□□□□□ -1.36
NEDD9-205ENST00000459670 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
NEDD9-205ENST00000459670 KRTAP11-1Q8IUC1 163 aa6.55□□□□□ -1.36
NEDD9-205ENST00000459670 TMEM126AQ9H061 195 aa6.55□□□□□ -1.36
NEDD9-205ENST00000459670 LINC00474Q9P2X8 69 aa6.55□□□□□ -1.36
NEDD9-205ENST00000459670 C22orf24Q9Y442 160 aa6.55□□□□□ -1.36
NEDD9-205ENST00000459670 IGLV1-50A0A075B6I6 118 aa6.54□□□□□ -1.36
NEDD9-205ENST00000459670 A0A1B0GV90 55 aa6.54□□□□□ -1.36
NEDD9-205ENST00000459670 FAM19A5Q7Z5A7 132 aaPredicted RBP6.54□□□□□ -1.36
NEDD9-205ENST00000459670 LINC00167Q96N53 147 aa6.54□□□□□ -1.36
NEDD9-205ENST00000459670 KCNQ1DNQ9H478 68 aa6.54□□□□□ -1.36
NEDD9-205ENST00000459670 FAM30AQ9NZY2 134 aa6.54□□□□□ -1.36
NEDD9-205ENST00000459670 M0QXV9 152 aa6.53□□□□□ -1.36
NEDD9-205ENST00000459670 MRPL55Q7Z7F7 128 aaKnown RBP6.53□□□□□ -1.36
NEDD9-205ENST00000459670 BIRC6Q9NR09 4857 aa6.52□□□□□ -1.37
NEDD9-205ENST00000459670 A0A087WYN8 130 aa6.52□□□□□ -1.37
NEDD9-205ENST00000459670 VPS13BQ7Z7G8 4022 aa6.52□□□□□ -1.37
NEDD9-205ENST00000459670 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
NEDD9-205ENST00000459670 H7C2G1 150 aa6.51□□□□□ -1.37
NEDD9-205ENST00000459670 PRYO14603 147 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms