RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 CSNK1G2-AS1Q8NCQ2 148 aa5.91□□□□□ -1.46
VPS50-208ENST00000458707 TRGV4A0A0C4DH28 118 aa5.9□□□□□ -1.46
VPS50-208ENST00000458707 CCL24O00175 119 aa5.9□□□□□ -1.46
VPS50-208ENST00000458707 SPATA3Q8NHX4 192 aa5.9□□□□□ -1.46
VPS50-208ENST00000458707 ORMDL1Q9P0S3 153 aa5.9□□□□□ -1.46
VPS50-208ENST00000458707 LINC00959A0A1B0GUT2 108 aa5.9□□□□□ -1.47
VPS50-208ENST00000458707 BCE1O60756 84 aa5.9□□□□□ -1.47
VPS50-208ENST00000458707 HIVEP1P15822 2718 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 IGKV3OR2-268A0A0C4DH90 116 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 TRBV7-6A0A0J9YX20 115 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 NCR3O14931 201 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 CCKP06307 115 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 Q8IZM0 81 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 C11orf44Q8N8P7 122 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 C19orf73Q9NVV2 129 aa5.89□□□□□ -1.47
VPS50-208ENST00000458707 IGKV3D-7A0A0C4DH55 119 aa5.88□□□□□ -1.47
VPS50-208ENST00000458707 PDZD2O15018 2839 aa5.88□□□□□ -1.47
VPS50-208ENST00000458707 A0A1B0GUV1 79 aa5.88□□□□□ -1.47
VPS50-208ENST00000458707 JMJD7-PLA2G4BH0Y9G9 81 aa5.88□□□□□ -1.47
VPS50-208ENST00000458707 ATP5EP56381 51 aaPredicted RBP5.88□□□□□ -1.47
VPS50-208ENST00000458707 NANOS2P60321 138 aaKnown RBP5.88□□□□□ -1.47
VPS50-208ENST00000458707 TLN2Q9Y4G6 2542 aa5.87□□□□□ -1.47
VPS50-208ENST00000458707 SLPIP03973 132 aa5.87□□□□□ -1.47
VPS50-208ENST00000458707 DEFB113Q30KQ7 82 aa5.87□□□□□ -1.47
VPS50-208ENST00000458707 S100A7L2Q5SY68 101 aa5.87□□□□□ -1.47
VPS50-208ENST00000458707 ATP5EP2Q5VTU8 51 aa5.87□□□□□ -1.47
VPS50-208ENST00000458707 CENPEQ02224 2701 aa5.87□□□□□ -1.47
VPS50-208ENST00000458707 DNAJC9-AS1A6NH13 148 aa5.86□□□□□ -1.47
VPS50-208ENST00000458707 USP17L23D6RBM5 183 aa5.86□□□□□ -1.47
VPS50-208ENST00000458707 IGLV1-51P01701 117 aa5.86□□□□□ -1.47
VPS50-208ENST00000458707 LYPD5Q6UWN5 251 aa5.86□□□□□ -1.47
VPS50-208ENST00000458707 LINC00612Q8N6U2 182 aa5.86□□□□□ -1.47
VPS50-208ENST00000458707 Q8N814 137 aa5.86□□□□□ -1.47
VPS50-208ENST00000458707 WFDC10AQ9H1F0 79 aa5.86□□□□□ -1.47
VPS50-208ENST00000458707 A0A087WVE0 104 aa5.85□□□□□ -1.47
VPS50-208ENST00000458707 H7BZZ5 65 aa5.85□□□□□ -1.47
VPS50-208ENST00000458707 TMEM256-PLSCR3K7ERE1 68 aa5.85□□□□□ -1.47
VPS50-208ENST00000458707 COX17Q14061 63 aa5.85□□□□□ -1.47
VPS50-208ENST00000458707 KRTAP4-2Q9BYR5 136 aa5.85□□□□□ -1.47
VPS50-208ENST00000458707 NBEAL1Q6ZS30 2694 aa5.85□□□□□ -1.47
VPS50-208ENST00000458707 KRTAP10-9P60411 292 aa5.85□□□□□ -1.47
VPS50-208ENST00000458707 JMJD1CQ15652 2540 aa5.84□□□□□ -1.47
VPS50-208ENST00000458707 FN1P02751 2386 aaKnown RBP5.84□□□□□ -1.47
VPS50-208ENST00000458707 IGHV4-28A0A0C4DH34 117 aa5.83□□□□□ -1.48
VPS50-208ENST00000458707 TRBV10-3A0A0K0K1G6 114 aa5.83□□□□□ -1.48
VPS50-208ENST00000458707 XCL1P47992 114 aa5.83□□□□□ -1.48
VPS50-208ENST00000458707 KIAA0087Q14695 138 aa5.83□□□□□ -1.48
VPS50-208ENST00000458707 C11orf68Q9H3H3 251 aaKnown RBP5.83□□□□□ -1.48
VPS50-208ENST00000458707 KRTAP5-3Q6L8H2 238 aa5.83□□□□□ -1.48
VPS50-208ENST00000458707 MRPL55Q7Z7F7 128 aaKnown RBP5.83□□□□□ -1.48
VPS50-208ENST00000458707 ESM1Q9NQ30 184 aa5.83□□□□□ -1.48
VPS50-208ENST00000458707 GYPEP15421 78 aa5.82□□□□□ -1.48
VPS50-208ENST00000458707 KLKP1Q107X0 134 aa5.82□□□□□ -1.48
VPS50-208ENST00000458707 ZNF469Q96JG9 3925 aaPredicted RBP5.82□□□□□ -1.48
VPS50-208ENST00000458707 NIPBLQ6KC79 2804 aaeCLIP5.82□□□□□ -1.48
VPS50-208ENST00000458707 PRR3P79522 188 aaKnown RBP5.81□□□□□ -1.48
VPS50-208ENST00000458707 CD164L2Q6UWJ8 174 aa5.81□□□□□ -1.48
VPS50-208ENST00000458707 NDUFC1O43677 76 aa5.81□□□□□ -1.48
VPS50-208ENST00000458707 LINC01006Q8NI28 216 aa5.81□□□□□ -1.48
VPS50-208ENST00000458707 DEFB130BP0DP73 79 aa5.8□□□□□ -1.48
VPS50-208ENST00000458707 DEFB130AP0DP74 79 aa5.8□□□□□ -1.48
VPS50-208ENST00000458707 LINC00575Q6W349 94 aa5.8□□□□□ -1.48
VPS50-208ENST00000458707 MUC7Q8TAX7 377 aa5.8□□□□□ -1.48
VPS50-208ENST00000458707 LOC110117498A0A087WWA1 95 aa5.79□□□□□ -1.48
VPS50-208ENST00000458707 UBL5Q9BZL1 73 aa5.79□□□□□ -1.48
VPS50-208ENST00000458707 PRO0255Q9UI72 69 aa5.79□□□□□ -1.48
VPS50-208ENST00000458707 FBN1P35555 2871 aaKnown RBP5.79□□□□□ -1.48
VPS50-208ENST00000458707 C6orf99Q4VX62 202 aa5.79□□□□□ -1.48
VPS50-208ENST00000458707 CLPSL2Q6UWE3 100 aa5.79□□□□□ -1.48
VPS50-208ENST00000458707 Q6ZQT0 140 aa5.79□□□□□ -1.48
VPS50-208ENST00000458707 TM2D3Q9BRN9 247 aa5.79□□□□□ -1.48
VPS50-208ENST00000458707 RNASE1P07998 156 aaKnown RBP5.78□□□□□ -1.48
VPS50-208ENST00000458707 C6orf223Q8N319 242 aa5.78□□□□□ -1.48
VPS50-208ENST00000458707 Q8NDZ9 215 aa5.78□□□□□ -1.48
VPS50-208ENST00000458707 CHCHD10Q8WYQ3 142 aaPredicted RBP5.78□□□□□ -1.48
VPS50-208ENST00000458707 LINC00474Q9P2X8 69 aa5.78□□□□□ -1.48
VPS50-208ENST00000458707 X6R8D5 127 aa5.78□□□□□ -1.48
VPS50-208ENST00000458707 SONP18583 2426 aaKnown RBP5.78□□□□□ -1.48
VPS50-208ENST00000458707 APCP25054 2843 aa5.78□□□□□ -1.48
VPS50-208ENST00000458707 TRAV7A0A075B6U4 112 aa5.77□□□□□ -1.49
VPS50-208ENST00000458707 ENHOQ6UWT2 76 aa5.77□□□□□ -1.49
VPS50-208ENST00000458707 LINC00269Q8N2A0 174 aa5.77□□□□□ -1.49
VPS50-208ENST00000458707 TRAV23DV6A0A075B6W5 121 aa5.77□□□□□ -1.49
VPS50-208ENST00000458707 RBM3P98179 157 aaKnown RBP5.77□□□□□ -1.49
VPS50-208ENST00000458707 REG3AQ06141 175 aa5.77□□□□□ -1.49
VPS50-208ENST00000458707 C9orf116Q5BN46 136 aaPredicted RBP5.77□□□□□ -1.49
VPS50-208ENST00000458707 WFDC9Q8NEX5 89 aa5.77□□□□□ -1.49
VPS50-208ENST00000458707 H3BQ85 93 aa5.76□□□□□ -1.49
VPS50-208ENST00000458707 IGLV6-57P01721 117 aa5.76□□□□□ -1.49
VPS50-208ENST00000458707 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
VPS50-208ENST00000458707 CUBNO60494 3623 aa5.76□□□□□ -1.49
VPS50-208ENST00000458707 A0A0J9YWU9 116 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 LYRM9A8MSI8 78 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 IGHV4-30-4P0DP06 118 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 C9orf66Q5T8R8 295 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 LCE4AQ5TA78 99 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 RBM12B-AS1Q9P1G2 102 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 ATRQ13535 2644 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 A0A096LPF7 62 aa5.75□□□□□ -1.49
VPS50-208ENST00000458707 PDE6GP18545 87 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms