RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 C10orf142B7Z368 130 aa13.39□□□□□ -0.27
SNX27-204ENST00000458013 ATP11AUNQ6ZP68 121 aa13.37□□□□□ -0.27
SNX27-204ENST00000458013 NHLRC4P0CG21 123 aaPredicted RBP13.35□□□□□ -0.27
SNX27-204ENST00000458013 Q6ZRX8 168 aa13.35□□□□□ -0.27
SNX27-204ENST00000458013 LINC00588Q9Y4M8 146 aa13.35□□□□□ -0.27
SNX27-204ENST00000458013 BDP1A6H8Y1 2624 aa13.34□□□□□ -0.27
SNX27-204ENST00000458013 Q6ZRP5 223 aa13.33□□□□□ -0.28
SNX27-204ENST00000458013 PRO0628Q9UI54 55 aa13.33□□□□□ -0.28
SNX27-204ENST00000458013 PRO0461Q9UI25 63 aa13.32□□□□□ -0.28
SNX27-204ENST00000458013 C16orf90A8MZG2 172 aa13.31□□□□□ -0.28
SNX27-204ENST00000458013 KRTAP24-1Q3LI83 254 aa13.31□□□□□ -0.28
SNX27-204ENST00000458013 MUC4Q99102 2169 aa13.31□□□□□ -0.28
SNX27-204ENST00000458013 TP53AIP1Q9HCN2 124 aa13.31□□□□□ -0.28
SNX27-204ENST00000458013 A0A0G2JQZ4 141 aa13.31□□□□□ -0.28
SNX27-204ENST00000458013 A0A1W2PNN7 141 aa13.31□□□□□ -0.28
SNX27-204ENST00000458013 Q8NBF4 154 aa13.3□□□□□ -0.28
SNX27-204ENST00000458013 K7EQZ3 153 aa13.28□□□□□ -0.28
SNX27-204ENST00000458013 COL4A2P08572 1712 aa13.28□□□□□ -0.28
SNX27-204ENST00000458013 SSBP3-AS1Q7Z2R9 100 aa13.27□□□□□ -0.29
SNX27-204ENST00000458013 FAM229AH3BQW9 127 aa13.27□□□□□ -0.29
SNX27-204ENST00000458013 NBDYA0A0U1RRE5 68 aa13.26□□□□□ -0.29
SNX27-204ENST00000458013 C9orf92A6NGG3 77 aa13.26□□□□□ -0.29
SNX27-204ENST00000458013 IGLV5-45A0A087WSX0 123 aa13.26□□□□□ -0.29
SNX27-204ENST00000458013 DSCR10P59022 87 aa13.24□□□□□ -0.29
SNX27-204ENST00000458013 TRAV22A0A0B4J277 110 aa13.24□□□□□ -0.29
SNX27-204ENST00000458013 SONP18583 2426 aaKnown RBP13.23□□□□□ -0.29
SNX27-204ENST00000458013 LOC110117498A0A087WWA1 95 aa13.23□□□□□ -0.29
SNX27-204ENST00000458013 Q8NAQ8 132 aa13.23□□□□□ -0.29
SNX27-204ENST00000458013 DNAH10OSP0CZ25 163 aa13.22□□□□□ -0.29
SNX27-204ENST00000458013 TRBV7-4A0A0J9YYF1 115 aa13.22□□□□□ -0.29
SNX27-204ENST00000458013 APLNQ9ULZ1 77 aa13.22□□□□□ -0.29
SNX27-204ENST00000458013 BCE1O60756 84 aa13.19□□□□□ -0.3
SNX27-204ENST00000458013 EP400Q96L91 3159 aa13.19□□□□□ -0.3
SNX27-204ENST00000458013 PIEZO2Q9H5I5 2752 aa13.18□□□□□ -0.3
SNX27-204ENST00000458013 COA5Q86WW8 74 aa13.17□□□□□ -0.3
SNX27-204ENST00000458013 A8MUN3 132 aa13.16□□□□□ -0.3
SNX27-204ENST00000458013 C8orf87E5RJ46 101 aa13.16□□□□□ -0.3
SNX27-204ENST00000458013 LITAFQ99732 161 aa13.16□□□□□ -0.3
SNX27-204ENST00000458013 ANAPC11Q9NYG5 84 aa13.16□□□□□ -0.3
SNX27-204ENST00000458013 GVQW2A0A096LPI5 108 aaPredicted RBP13.13□□□□□ -0.31
SNX27-204ENST00000458013 NOTCH2Q04721 2471 aa13.13□□□□□ -0.31
SNX27-204ENST00000458013 LINC01600Q96MT4 127 aa13.12□□□□□ -0.31
SNX27-204ENST00000458013 VPREB1P12018 145 aa13.12□□□□□ -0.31
SNX27-204ENST00000458013 A8MWP4 228 aa13.11□□□□□ -0.31
SNX27-204ENST00000458013 J3QL48 77 aa13.11□□□□□ -0.31
SNX27-204ENST00000458013 EIF4EBP3O60516 100 aaPredicted RBP13.11□□□□□ -0.31
SNX27-204ENST00000458013 IGLV6-57P01721 117 aa13.11□□□□□ -0.31
SNX27-204ENST00000458013 GOLGB1Q14789 3259 aaKnown RBP13.1□□□□□ -0.31
SNX27-204ENST00000458013 OBSCN-AS1Q96MR7 158 aa13.1□□□□□ -0.31
SNX27-204ENST00000458013 KRTAP10-11P60412 298 aa13.1□□□□□ -0.31
SNX27-204ENST00000458013 SMR3BP02814 79 aaPredicted RBP13.09□□□□□ -0.31
SNX27-204ENST00000458013 H3BNG1 76 aa13.09□□□□□ -0.31
SNX27-204ENST00000458013 MRPL34Q9BQ48 92 aaKnown RBP13.08□□□□□ -0.32
SNX27-204ENST00000458013 IGFL1Q6UW32 110 aa13.07□□□□□ -0.32
SNX27-204ENST00000458013 IGLV1-50A0A075B6I6 118 aa13.06□□□□□ -0.32
SNX27-204ENST00000458013 ACACBO00763 2458 aa13.06□□□□□ -0.32
SNX27-204ENST00000458013 COX6B2Q6YFQ2 88 aa13.06□□□□□ -0.32
SNX27-204ENST00000458013 ABCA2Q9BZC7 2435 aa13.05□□□□□ -0.32
SNX27-204ENST00000458013 C15orf56Q8N910 161 aa13.04□□□□□ -0.32
SNX27-204ENST00000458013 PCSK5Q92824 1860 aa13.03□□□□□ -0.32
SNX27-204ENST00000458013 H3BPC8 53 aa13.02□□□□□ -0.33
SNX27-204ENST00000458013 LOC101927531A0A1B0GV80 90 aa13□□□□□ -0.33
SNX27-204ENST00000458013 C2CD3Q4AC94 2353 aa12.99□□□□□ -0.33
SNX27-204ENST00000458013 C9orf129Q5T035 196 aaKnown RBP12.99□□□□□ -0.33
SNX27-204ENST00000458013 RPS28P62857 69 aaKnown RBP12.98□□□□□ -0.33
SNX27-204ENST00000458013 NAV2Q8IVL1 2488 aa12.98□□□□□ -0.33
SNX27-204ENST00000458013 ATRXP46100 2492 aa12.98□□□□□ -0.33
SNX27-204ENST00000458013 A0A0D9SG42 100 aa12.98□□□□□ -0.33
SNX27-204ENST00000458013 LINC01554Q52M75 96 aa12.97□□□□□ -0.33
SNX27-204ENST00000458013 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
SNX27-204ENST00000458013 C8orf17Q9NRJ1 99 aa12.95□□□□□ -0.34
SNX27-204ENST00000458013 TTC28Q96AY4 2481 aa12.94□□□□□ -0.34
SNX27-204ENST00000458013 CCDC168Q8NDH2 2452 aa12.93□□□□□ -0.34
SNX27-204ENST00000458013 MIR22HGQ0VDD5 57 aa12.93□□□□□ -0.34
SNX27-204ENST00000458013 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
SNX27-204ENST00000458013 A0A1B0GW54 56 aa12.93□□□□□ -0.34
SNX27-204ENST00000458013 WDR87Q6ZQQ6 2873 aa12.93□□□□□ -0.34
SNX27-204ENST00000458013 Q8N377 158 aa12.91□□□□□ -0.34
SNX27-204ENST00000458013 IGF2RP11717 2491 aa12.91□□□□□ -0.34
SNX27-204ENST00000458013 LINC00304Q8N9R0 145 aa12.9□□□□□ -0.34
SNX27-204ENST00000458013 WWC2-AS2Q96NR7 200 aa12.9□□□□□ -0.34
SNX27-204ENST00000458013 CASC10Q5T4H9 136 aa12.9□□□□□ -0.34
SNX27-204ENST00000458013 K7EIL1 84 aa12.9□□□□□ -0.34
SNX27-204ENST00000458013 PRR15Q8IV56 129 aa12.9□□□□□ -0.34
SNX27-204ENST00000458013 KCNQ1DNQ9H478 68 aa12.9□□□□□ -0.34
SNX27-204ENST00000458013 LINC00528Q8N1L1 170 aa12.88□□□□□ -0.35
SNX27-204ENST00000458013 Q8N1X5 172 aa12.88□□□□□ -0.35
SNX27-204ENST00000458013 UQCR11O14957 56 aa12.87□□□□□ -0.35
SNX27-204ENST00000458013 CRIPTQ9P021 101 aa12.86□□□□□ -0.35
SNX27-204ENST00000458013 A0A1B0GVX0 72 aa12.85□□□□□ -0.35
SNX27-204ENST00000458013 ERC2-IT1O76042 136 aa12.82□□□□□ -0.36
SNX27-204ENST00000458013 IGLV5-37A0A075B6J1 123 aa12.8□□□□□ -0.36
SNX27-204ENST00000458013 ZNF861PO60384 105 aa12.79□□□□□ -0.36
SNX27-204ENST00000458013 CENPFP49454 3210 aa12.77□□□□□ -0.36
SNX27-204ENST00000458013 LINC00336Q6ZUF6 198 aa12.77□□□□□ -0.37
SNX27-204ENST00000458013 A0A087WTM6 91 aa12.77□□□□□ -0.37
SNX27-204ENST00000458013 GIG44P09565 113 aaPredicted RBP12.76□□□□□ -0.37
SNX27-204ENST00000458013 IGLV5-48A0A075B6I7 105 aa12.76□□□□□ -0.37
SNX27-204ENST00000458013 NCOR2Q9Y618 2525 aa12.75□□□□□ -0.37
SNX27-204ENST00000458013 CACNA1AO00555 2505 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms