RNA–Protein interactions for RNA: ENST00000453285.1

SDC4P-201, Transcript of syndecan 4 pseudogene, humanhuman

BASIC

Gene SDC4P, Length 601 nt, Biotype processed pseudogene, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P-201ENST00000453285 A0A087WTM6 91 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.88□□□□□ -1.79
SDC4P-201ENST00000453285 NDUFC2-KCTD14E9PQ53 114 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 IGKV2D-28P01615 120 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 CNBPP62633 177 aaKnown RBP3.88□□□□□ -1.79
SDC4P-201ENST00000453285 C14orf177Q52M58 125 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 C1orf134Q5TEV5 83 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 Q6ZRP5 223 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 COPS9Q8WXC6 57 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 RAB37Q96AX2 223 aa3.88□□□□□ -1.79
SDC4P-201ENST00000453285 A0A1B0GV90 55 aa3.87□□□□□ -1.79
SDC4P-201ENST00000453285 C9orf118A6NHY6 69 aa3.87□□□□□ -1.79
SDC4P-201ENST00000453285 NDUFC2O95298 119 aa3.87□□□□□ -1.79
SDC4P-201ENST00000453285 C9orf129Q5T035 196 aaKnown RBP3.87□□□□□ -1.79
SDC4P-201ENST00000453285 Q8N814 137 aa3.87□□□□□ -1.79
SDC4P-201ENST00000453285 PRO1854Q9UHT4 67 aa3.87□□□□□ -1.79
SDC4P-201ENST00000453285 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.86□□□□□ -1.79
SDC4P-201ENST00000453285 LCE6AA0A183 80 aa3.86□□□□□ -1.79
SDC4P-201ENST00000453285 RTL8CO15255 209 aa3.86□□□□□ -1.79
SDC4P-201ENST00000453285 TSPAN13O95857 204 aa3.86□□□□□ -1.79
SDC4P-201ENST00000453285 PRR3P79522 188 aaKnown RBP3.86□□□□□ -1.79
SDC4P-201ENST00000453285 LINC00337Q8N6G1 96 aa3.86□□□□□ -1.79
SDC4P-201ENST00000453285 C9orf163Q8N9P6 203 aa3.86□□□□□ -1.79
SDC4P-201ENST00000453285 NAA38Q9BRA0 125 aaKnown RBP3.86□□□□□ -1.79
SDC4P-201ENST00000453285 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
SDC4P-201ENST00000453285 HECTD4Q9Y4D8 3996 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 LOC107984640A0A0U1RRK4 108 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 H3BUT2 72 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 VPREB1P12018 145 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 TNP2Q05952 138 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 GAGE2EQ4V326 116 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 KRTAP7-1Q8IUC3 87 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 PGPEP1Q9NXJ5 209 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 GAGE2DQ9UEU5 116 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 PLA2G2DQ9UNK4 145 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
SDC4P-201ENST00000453285 DNAH11Q96DT5 4516 aa3.84□□□□□ -1.79
SDC4P-201ENST00000453285 TRAV13-2A0A0B4J235 113 aa3.84□□□□□ -1.79
SDC4P-201ENST00000453285 A0A1W2PPM0 123 aa3.84□□□□□ -1.79
SDC4P-201ENST00000453285 RPL13AP40429 203 aaKnown RBP3.84□□□□□ -1.79
SDC4P-201ENST00000453285 RPL18AQ02543 176 aaKnown RBP3.84□□□□□ -1.79
SDC4P-201ENST00000453285 SDIM1Q6ZPB5 146 aa3.84□□□□□ -1.79
SDC4P-201ENST00000453285 RYR1P21817 5038 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 IGLV5-37A0A075B6J1 123 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 A0A096LNI7 61 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 TRBV10-2A0A0K0K1G8 114 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 C16orf90A8MZG2 172 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 H7C2G1 150 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 NCR3O14931 201 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 FUSP35637 526 aaKnown RBP eCLIP3.83□□□□□ -1.8
SDC4P-201ENST00000453285 GAGE2BQ13066 116 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 LINC01620Q4KN68 170 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 SERTAD4-AS1Q5TG53 156 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 FAT2Q9NYQ8 4349 aa3.83□□□□□ -1.8
SDC4P-201ENST00000453285 PKD1P98161 4303 aa3.82□□□□□ -1.8
SDC4P-201ENST00000453285 FAM168BA1KXE4 195 aa3.82□□□□□ -1.8
SDC4P-201ENST00000453285 TRIAP1O43715 76 aa3.82□□□□□ -1.8
SDC4P-201ENST00000453285 IGLV6-57P01721 117 aa3.82□□□□□ -1.8
SDC4P-201ENST00000453285 RPL28P46779 137 aaKnown RBP3.82□□□□□ -1.8
SDC4P-201ENST00000453285 SMIM11BQ8TCY0 68 aa3.82□□□□□ -1.8
SDC4P-201ENST00000453285 TRBV10-3A0A0K0K1G6 114 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 A0A1W2PNN7 141 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 PANO1I0J062 215 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 M0R378 163 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 CHTF8P0CG12 524 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 FABP2P12104 132 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 VAMP3Q15836 100 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 Q1RN00 199 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 OR13C6PQ8NH95 151 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 C7orf33Q8WU49 177 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 TMEM126AQ9H061 195 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 DNAH5Q8TE73 4624 aa3.81□□□□□ -1.8
SDC4P-201ENST00000453285 IGKV2-24A0A0C4DH68 120 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 EPM2AB3EWF7 344 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 K7EP34 96 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 TCL1BO95988 128 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 PSMB2P49721 201 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 KRTAP10-2P60368 255 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 C22orf24Q9Y442 160 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 SPCS1Q9Y6A9 102 aa3.8□□□□□ -1.8
SDC4P-201ENST00000453285 RYR2Q92736 4967 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 DNAH8Q96JB1 4490 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 IGLV5-52A0A0A0MRZ9 124 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 GAGE10A6NGK3 116 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 J3QL48 77 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 SCGB1C2P0DMR2 95 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 UBE2V1Q13404 147 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 S100A7L2Q5SY68 101 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 FAM19A5Q7Z5A7 132 aaPredicted RBP3.79□□□□□ -1.8
SDC4P-201ENST00000453285 SPACA4Q8TDM5 124 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 LINC00167Q96N53 147 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 PKIGQ9Y2B9 76 aa3.79□□□□□ -1.8
SDC4P-201ENST00000453285 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.79□□□□□ -1.8
SDC4P-201ENST00000453285 IGLV1-50A0A075B6I6 118 aa3.78□□□□□ -1.8
SDC4P-201ENST00000453285 TRBV20-1A0A075B6N2 111 aa3.78□□□□□ -1.8
SDC4P-201ENST00000453285 COX6CP09669 75 aa3.78□□□□□ -1.8
SDC4P-201ENST00000453285 LYRM7Q5U5X0 104 aa3.78□□□□□ -1.8
SDC4P-201ENST00000453285 MRPL55Q7Z7F7 128 aaKnown RBP3.78□□□□□ -1.8
SDC4P-201ENST00000453285 NKAPP1Q8N9T2 125 aa3.78□□□□□ -1.8
SDC4P-201ENST00000453285 CLEC2BQ92478 149 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms