RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 SPINK8P0C7L1 97 aa7.5□□□□□ -1.21
CPSF4-208ENST00000452047 PMCHL1Q16048 86 aa7.5□□□□□ -1.21
CPSF4-208ENST00000452047 CHCHD1Q96BP2 118 aaKnown RBP7.5□□□□□ -1.21
CPSF4-208ENST00000452047 URB1-AS1Q96HZ7 61 aa7.5□□□□□ -1.21
CPSF4-208ENST00000452047 RNF213Q63HN8 5207 aa7.5□□□□□ -1.21
CPSF4-208ENST00000452047 HSBP1O75506 76 aa7.49□□□□□ -1.21
CPSF4-208ENST00000452047 IGLV1-50A0A075B6I6 118 aa7.48□□□□□ -1.21
CPSF4-208ENST00000452047 ZNF861PO60384 105 aa7.48□□□□□ -1.21
CPSF4-208ENST00000452047 IGLC3P0DOY3 106 aa7.48□□□□□ -1.21
CPSF4-208ENST00000452047 KRTDAPP60985 99 aa7.48□□□□□ -1.21
CPSF4-208ENST00000452047 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
CPSF4-208ENST00000452047 LPAP08519 4548 aa7.48□□□□□ -1.21
CPSF4-208ENST00000452047 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
CPSF4-208ENST00000452047 LINC00614P0C842 121 aa7.47□□□□□ -1.21
CPSF4-208ENST00000452047 A0A1B0GV90 55 aa7.46□□□□□ -1.22
CPSF4-208ENST00000452047 H3BRM9 83 aa7.46□□□□□ -1.22
CPSF4-208ENST00000452047 HBDP02042 147 aa7.46□□□□□ -1.22
CPSF4-208ENST00000452047 C3orf79P0CE67 100 aa7.46□□□□□ -1.22
CPSF4-208ENST00000452047 ZNF22P17026 224 aaPredicted RBP7.46□□□□□ -1.22
CPSF4-208ENST00000452047 SNHG12Q9BXW3 62 aa7.46□□□□□ -1.22
CPSF4-208ENST00000452047 UQCR10Q9UDW1 63 aa7.46□□□□□ -1.22
CPSF4-208ENST00000452047 IGLV5-37A0A075B6J1 123 aa7.45□□□□□ -1.22
CPSF4-208ENST00000452047 LINC00167Q96N53 147 aa7.45□□□□□ -1.22
CPSF4-208ENST00000452047 BCE1O60756 84 aa7.44□□□□□ -1.22
CPSF4-208ENST00000452047 ATP5LO75964 103 aa7.44□□□□□ -1.22
CPSF4-208ENST00000452047 SPATA45Q537H7 98 aa7.44□□□□□ -1.22
CPSF4-208ENST00000452047 PAM16Q9Y3D7 125 aa7.44□□□□□ -1.22
CPSF4-208ENST00000452047 RPL37AP8A6NKH3 93 aa7.43□□□□□ -1.22
CPSF4-208ENST00000452047 RPL13AP40429 203 aaKnown RBP7.43□□□□□ -1.22
CPSF4-208ENST00000452047 RPL28P46779 137 aaKnown RBP7.42□□□□□ -1.22
CPSF4-208ENST00000452047 PET117Q6UWS5 81 aa7.42□□□□□ -1.22
CPSF4-208ENST00000452047 FAM19A2Q8N3H0 131 aa7.42□□□□□ -1.22
CPSF4-208ENST00000452047 HSPB8Q9UJY1 196 aa7.42□□□□□ -1.22
CPSF4-208ENST00000452047 GAGE10A6NGK3 116 aa7.41□□□□□ -1.22
CPSF4-208ENST00000452047 C11orf86A6NJI1 115 aa7.41□□□□□ -1.22
CPSF4-208ENST00000452047 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
CPSF4-208ENST00000452047 LEPROTL1O95214 131 aa7.4□□□□□ -1.22
CPSF4-208ENST00000452047 PFN2P35080 140 aa7.4□□□□□ -1.22
CPSF4-208ENST00000452047 COL5A1-AS1Q5SY13 56 aa7.4□□□□□ -1.22
CPSF4-208ENST00000452047 NKAPP1Q8N9T2 125 aa7.4□□□□□ -1.22
CPSF4-208ENST00000452047 ERG28Q9UKR5 140 aa7.4□□□□□ -1.22
CPSF4-208ENST00000452047 A0A087X002 238 aa7.39□□□□□ -1.23
CPSF4-208ENST00000452047 SYS1-DBNDD2H3BUS1 97 aa7.39□□□□□ -1.23
CPSF4-208ENST00000452047 VPREB1P12018 145 aa7.39□□□□□ -1.23
CPSF4-208ENST00000452047 COX17Q14061 63 aa7.39□□□□□ -1.23
CPSF4-208ENST00000452047 ZNF625Q96I27 306 aaPredicted RBP7.39□□□□□ -1.23
CPSF4-208ENST00000452047 MAP1LC3CQ9BXW4 147 aa7.39□□□□□ -1.23
CPSF4-208ENST00000452047 SND1-IT1Q9HBX3 110 aa7.39□□□□□ -1.23
CPSF4-208ENST00000452047 TMEM170BQ5T4T1 132 aa7.38□□□□□ -1.23
CPSF4-208ENST00000452047 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
CPSF4-208ENST00000452047 HSBP1L1C9JCN9 74 aa7.37□□□□□ -1.23
CPSF4-208ENST00000452047 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
CPSF4-208ENST00000452047 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
CPSF4-208ENST00000452047 Q8NDZ9 215 aa7.37□□□□□ -1.23
CPSF4-208ENST00000452047 PMCHL2Q9BQD1 86 aa7.36□□□□□ -1.23
CPSF4-208ENST00000452047 CHTOPQ9Y3Y2 248 aaKnown RBP7.36□□□□□ -1.23
CPSF4-208ENST00000452047 TRAV12-1A0A0B4J245 112 aa7.35□□□□□ -1.23
CPSF4-208ENST00000452047 TMEM223A0PJW6 202 aa7.35□□□□□ -1.23
CPSF4-208ENST00000452047 UBE2AP49459 152 aa7.35□□□□□ -1.23
CPSF4-208ENST00000452047 LINC01545Q5VT33 79 aa7.35□□□□□ -1.23
CPSF4-208ENST00000452047 IFI27L1Q96BM0 104 aa7.35□□□□□ -1.23
CPSF4-208ENST00000452047 DLEU1O43261 78 aa7.34□□□□□ -1.23
CPSF4-208ENST00000452047 CRYGAP11844 174 aa7.34□□□□□ -1.23
CPSF4-208ENST00000452047 RPL24P83731 157 aaKnown RBP7.34□□□□□ -1.23
CPSF4-208ENST00000452047 TMEM126AQ9H061 195 aa7.34□□□□□ -1.23
CPSF4-208ENST00000452047 ANAPC11Q9NYG5 84 aa7.34□□□□□ -1.23
CPSF4-208ENST00000452047 TMEM238C9JI98 176 aa7.33□□□□□ -1.24
CPSF4-208ENST00000452047 PRLHP81277 87 aa7.33□□□□□ -1.24
CPSF4-208ENST00000452047 KRTAP13-2Q52LG2 175 aa7.33□□□□□ -1.24
CPSF4-208ENST00000452047 M0R378 163 aa7.32□□□□□ -1.24
CPSF4-208ENST00000452047 PRR4Q16378 134 aa7.32□□□□□ -1.24
CPSF4-208ENST00000452047 SLC25A34Q6PIV7 304 aa7.32□□□□□ -1.24
CPSF4-208ENST00000452047 ATOH7Q8N100 152 aa7.32□□□□□ -1.24
CPSF4-208ENST00000452047 TYMSOSQ8TAI1 123 aa7.32□□□□□ -1.24
CPSF4-208ENST00000452047 FAM229BQ4G0N7 80 aa7.31□□□□□ -1.24
CPSF4-208ENST00000452047 TSPAN13O95857 204 aa7.3□□□□□ -1.24
CPSF4-208ENST00000452047 LINC00158P58513 81 aa7.3□□□□□ -1.24
CPSF4-208ENST00000452047 BATFQ16520 125 aa7.3□□□□□ -1.24
CPSF4-208ENST00000452047 FAM19A1Q7Z5A9 133 aa7.3□□□□□ -1.24
CPSF4-208ENST00000452047 A0A0U1RRA0 63 aa7.29□□□□□ -1.24
CPSF4-208ENST00000452047 SMIM13P0DJ93 91 aa7.28□□□□□ -1.24
CPSF4-208ENST00000452047 COX8AP10176 69 aa7.28□□□□□ -1.24
CPSF4-208ENST00000452047 MUC2Q02817 5179 aa7.28□□□□□ -1.24
CPSF4-208ENST00000452047 PLEKHB2Q96CS7 222 aa7.27□□□□□ -1.25
CPSF4-208ENST00000452047 HINT1P49773 126 aaPredicted RBP7.26□□□□□ -1.25
CPSF4-208ENST00000452047 HERV-K104P63124 156 aa7.26□□□□□ -1.25
CPSF4-208ENST00000452047 MIR7-3HGQ8N6C7 128 aa7.26□□□□□ -1.25
CPSF4-208ENST00000452047 NDUFA12Q9UI09 145 aa7.26□□□□□ -1.25
CPSF4-208ENST00000452047 H0Y8G0 127 aa7.25□□□□□ -1.25
CPSF4-208ENST00000452047 TSPEAR-AS2P59090 65 aa7.25□□□□□ -1.25
CPSF4-208ENST00000452047 MEIG1Q5JSS6 88 aa7.25□□□□□ -1.25
CPSF4-208ENST00000452047 BVES-AS1Q5T3Y7 98 aa7.25□□□□□ -1.25
CPSF4-208ENST00000452047 BOD1L2Q8IYS8 172 aa7.25□□□□□ -1.25
CPSF4-208ENST00000452047 LINC00304Q8N9R0 145 aa7.25□□□□□ -1.25
CPSF4-208ENST00000452047 IGKV2D-26A0A0A0MRZ7 120 aa7.24□□□□□ -1.25
CPSF4-208ENST00000452047 HIGD2AQ9BW72 106 aa7.24□□□□□ -1.25
CPSF4-208ENST00000452047 MYMXA0A1B0GTQ4 84 aa7.23□□□□□ -1.25
CPSF4-208ENST00000452047 PRYO14603 147 aa7.23□□□□□ -1.25
CPSF4-208ENST00000452047 NCR3O14931 201 aa7.23□□□□□ -1.25
CPSF4-208ENST00000452047 PLNP26678 52 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms