RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 C16orf90A8MZG2 172 aa6.98□□□□□ -1.29
SCN10A-201ENST00000449082 Q6ZRP5 223 aa6.98□□□□□ -1.29
SCN10A-201ENST00000449082 PHF5AQ7RTV0 110 aaKnown RBP6.98□□□□□ -1.29
SCN10A-201ENST00000449082 WDR87Q6ZQQ6 2873 aa6.97□□□□□ -1.29
SCN10A-201ENST00000449082 hDV103S1A0JD37 113 aa6.97□□□□□ -1.29
SCN10A-201ENST00000449082 KLK9Q2XQG4 91 aa6.97□□□□□ -1.29
SCN10A-201ENST00000449082 SPATA3Q8NHX4 192 aa6.97□□□□□ -1.29
SCN10A-201ENST00000449082 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
SCN10A-201ENST00000449082 IGKV2-30P06310 120 aa6.96□□□□□ -1.3
SCN10A-201ENST00000449082 CRYGAP11844 174 aa6.96□□□□□ -1.3
SCN10A-201ENST00000449082 ELOF1P60002 83 aaKnown RBP6.96□□□□□ -1.3
SCN10A-201ENST00000449082 TMEM254Q8TBM7 123 aa6.95□□□□□ -1.3
SCN10A-201ENST00000449082 ZNF462Q96JM2 2506 aa6.95□□□□□ -1.3
SCN10A-201ENST00000449082 C1orf64Q8NEQ6 169 aa6.95□□□□□ -1.3
SCN10A-201ENST00000449082 PCSK5Q92824 1860 aa6.95□□□□□ -1.3
SCN10A-201ENST00000449082 CEP295Q9C0D2 2601 aa6.95□□□□□ -1.3
SCN10A-201ENST00000449082 GVQW2A0A096LPI5 108 aaPredicted RBP6.95□□□□□ -1.3
SCN10A-201ENST00000449082 A0A1B0GW54 56 aa6.95□□□□□ -1.3
SCN10A-201ENST00000449082 Q9UF83 564 aa6.95□□□□□ -1.3
SCN10A-201ENST00000449082 Q8NBF4 154 aa6.94□□□□□ -1.3
SCN10A-201ENST00000449082 SOSTDC1Q6X4U4 206 aa6.94□□□□□ -1.3
SCN10A-201ENST00000449082 Q6ZRX8 168 aa6.94□□□□□ -1.3
SCN10A-201ENST00000449082 TYMSOSQ8TAI1 123 aa6.94□□□□□ -1.3
SCN10A-201ENST00000449082 TP53AIP1Q9HCN2 124 aa6.94□□□□□ -1.3
SCN10A-201ENST00000449082 DNAH10OSP0CZ25 163 aa6.93□□□□□ -1.3
SCN10A-201ENST00000449082 EPM2AB3EWF7 344 aa6.93□□□□□ -1.3
SCN10A-201ENST00000449082 SRCAPQ6ZRS2 3230 aa6.93□□□□□ -1.3
SCN10A-201ENST00000449082 C7orf65Q6ZTY9 151 aa6.92□□□□□ -1.3
SCN10A-201ENST00000449082 CHTF8P0CG12 524 aa6.92□□□□□ -1.3
SCN10A-201ENST00000449082 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
SCN10A-201ENST00000449082 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
SCN10A-201ENST00000449082 USP9YO00507 2555 aaPredicted RBP6.91□□□□□ -1.3
SCN10A-201ENST00000449082 BCE1O60756 84 aa6.91□□□□□ -1.3
SCN10A-201ENST00000449082 LINC00476Q8WZB0 136 aa6.91□□□□□ -1.3
SCN10A-201ENST00000449082 CHD8Q9HCK8 2581 aa6.9□□□□□ -1.31
SCN10A-201ENST00000449082 SPTBN4Q9H254 2564 aa6.89□□□□□ -1.31
SCN10A-201ENST00000449082 LINC00313P59037 77 aa6.89□□□□□ -1.31
SCN10A-201ENST00000449082 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
SCN10A-201ENST00000449082 MUC4Q99102 2169 aa6.88□□□□□ -1.31
SCN10A-201ENST00000449082 K7EIL1 84 aa6.88□□□□□ -1.31
SCN10A-201ENST00000449082 KRTAP10-11P60412 298 aa6.87□□□□□ -1.31
SCN10A-201ENST00000449082 RPL37AP61513 92 aaKnown RBP6.87□□□□□ -1.31
SCN10A-201ENST00000449082 CSNK1G2-AS1Q8NCQ2 148 aa6.87□□□□□ -1.31
SCN10A-201ENST00000449082 ST20-AS1Q8NBB2 130 aa6.86□□□□□ -1.31
SCN10A-201ENST00000449082 SETD2Q9BYW2 2564 aaPredicted RBP6.86□□□□□ -1.31
SCN10A-201ENST00000449082 PSPHP1O15172 72 aa6.86□□□□□ -1.31
SCN10A-201ENST00000449082 LOC110117498A0A087WWA1 95 aa6.86□□□□□ -1.31
SCN10A-201ENST00000449082 Q6ZQT0 140 aa6.86□□□□□ -1.31
SCN10A-201ENST00000449082 ACYP2P14621 99 aa6.86□□□□□ -1.31
SCN10A-201ENST00000449082 ANKRD17O75179 2603 aaKnown RBP6.86□□□□□ -1.31
SCN10A-201ENST00000449082 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
SCN10A-201ENST00000449082 C1orf195Q5TG92 126 aa6.85□□□□□ -1.31
SCN10A-201ENST00000449082 A0A096LNT2 108 aa6.85□□□□□ -1.31
SCN10A-201ENST00000449082 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
SCN10A-201ENST00000449082 J3QL48 77 aa6.85□□□□□ -1.31
SCN10A-201ENST00000449082 VPREB1P12018 145 aa6.84□□□□□ -1.31
SCN10A-201ENST00000449082 CDIP1Q9H305 208 aa6.83□□□□□ -1.32
SCN10A-201ENST00000449082 PKD1L2Q7Z442 2459 aa6.83□□□□□ -1.32
SCN10A-201ENST00000449082 H3BPC8 53 aa6.83□□□□□ -1.32
SCN10A-201ENST00000449082 IGLV6-57P01721 117 aa6.82□□□□□ -1.32
SCN10A-201ENST00000449082 FAM168BA1KXE4 195 aa6.82□□□□□ -1.32
SCN10A-201ENST00000449082 ATP11AUNQ6ZP68 121 aa6.82□□□□□ -1.32
SCN10A-201ENST00000449082 A0A1B0GU69 56 aa6.81□□□□□ -1.32
SCN10A-201ENST00000449082 Q96NJ1 140 aa6.81□□□□□ -1.32
SCN10A-201ENST00000449082 FASNP49327 2511 aaKnown RBP6.81□□□□□ -1.32
SCN10A-201ENST00000449082 SMCPP49901 116 aaPredicted RBP6.81□□□□□ -1.32
SCN10A-201ENST00000449082 MTORP42345 2549 aa6.81□□□□□ -1.32
SCN10A-201ENST00000449082 TRBV7-4A0A0J9YYF1 115 aa6.81□□□□□ -1.32
SCN10A-201ENST00000449082 C8orf87E5RJ46 101 aa6.8□□□□□ -1.32
SCN10A-201ENST00000449082 KRTAP10-3P60369 221 aa6.8□□□□□ -1.32
SCN10A-201ENST00000449082 IGLV1-50A0A075B6I6 118 aa6.8□□□□□ -1.32
SCN10A-201ENST00000449082 SERTAD4-AS1Q5TG53 156 aa6.79□□□□□ -1.32
SCN10A-201ENST00000449082 TRAV22A0A0B4J277 110 aa6.79□□□□□ -1.32
SCN10A-201ENST00000449082 LITAFQ99732 161 aa6.78□□□□□ -1.32
SCN10A-201ENST00000449082 KCNQ1DNQ9H478 68 aa6.78□□□□□ -1.32
SCN10A-201ENST00000449082 PRR34Q9NV39 138 aa6.77□□□□□ -1.32
SCN10A-201ENST00000449082 CENPFP49454 3210 aa6.77□□□□□ -1.32
SCN10A-201ENST00000449082 PRO0461Q9UI25 63 aa6.77□□□□□ -1.33
SCN10A-201ENST00000449082 TM2D3Q9BRN9 247 aa6.76□□□□□ -1.33
SCN10A-201ENST00000449082 A8MWP4 228 aa6.76□□□□□ -1.33
SCN10A-201ENST00000449082 ACANP16112 2415 aa6.76□□□□□ -1.33
SCN10A-201ENST00000449082 POLQO75417 2590 aa6.75□□□□□ -1.33
SCN10A-201ENST00000449082 A0A087WTM6 91 aa6.75□□□□□ -1.33
SCN10A-201ENST00000449082 GIG44P09565 113 aaPredicted RBP6.75□□□□□ -1.33
SCN10A-201ENST00000449082 C15orf56Q8N910 161 aa6.75□□□□□ -1.33
SCN10A-201ENST00000449082 LINC00612Q8N6U2 182 aa6.75□□□□□ -1.33
SCN10A-201ENST00000449082 LOC101927531A0A1B0GV80 90 aa6.74□□□□□ -1.33
SCN10A-201ENST00000449082 ZNF861PO60384 105 aa6.74□□□□□ -1.33
SCN10A-201ENST00000449082 SPAG11AQ6PDA7 123 aa6.74□□□□□ -1.33
SCN10A-201ENST00000449082 MRPL34Q9BQ48 92 aaKnown RBP6.74□□□□□ -1.33
SCN10A-201ENST00000449082 LINC00304Q8N9R0 145 aa6.73□□□□□ -1.33
SCN10A-201ENST00000449082 F8P00451 2351 aa6.73□□□□□ -1.33
SCN10A-201ENST00000449082 SSBP3-AS1Q7Z2R9 100 aa6.73□□□□□ -1.33
SCN10A-201ENST00000449082 LINC00336Q6ZUF6 198 aa6.73□□□□□ -1.33
SCN10A-201ENST00000449082 LINC00528Q8N1L1 170 aa6.73□□□□□ -1.33
SCN10A-201ENST00000449082 KRTAP1-3Q8IUG1 177 aa6.72□□□□□ -1.33
SCN10A-201ENST00000449082 C9orf163Q8N9P6 203 aa6.71□□□□□ -1.33
SCN10A-201ENST00000449082 TLX1NBP0CAT3 122 aa6.71□□□□□ -1.34
SCN10A-201ENST00000449082 PLA2G2DQ9UNK4 145 aa6.71□□□□□ -1.34
SCN10A-201ENST00000449082 C9orf129Q5T035 196 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms