RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 LYPD5Q6UWN5 251 aa10.03□□□□□ -0.8
SF1-211ENST00000448404 NCR3O14931 201 aa10.03□□□□□ -0.8
SF1-211ENST00000448404 A0A0J9YWU9 116 aa10.02□□□□□ -0.81
SF1-211ENST00000448404 BAALC-AS2P0C853 105 aa10.02□□□□□ -0.81
SF1-211ENST00000448404 Q8IZM0 81 aa10.02□□□□□ -0.81
SF1-211ENST00000448404 KPRPQ5T749 579 aaPredicted RBP10.02□□□□□ -0.81
SF1-211ENST00000448404 GAGE2AQ6NT46 116 aa10.02□□□□□ -0.81
SF1-211ENST00000448404 STAB2Q8WWQ8 2551 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 hADV29S1A0JD25 119 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 HIGD2BQ4VC39 106 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 CSMD3Q7Z407 3707 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 TRAV13-2A0A0B4J235 113 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 J3KT08 172 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 MRAPQ8TCY5 172 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 CYSTM1Q9H1C7 97 aa10.01□□□□□ -0.81
SF1-211ENST00000448404 LECT2O14960 151 aa10□□□□□ -0.81
SF1-211ENST00000448404 COX7CP15954 63 aa10□□□□□ -0.81
SF1-211ENST00000448404 LELP1Q5T871 98 aa10□□□□□ -0.81
SF1-211ENST00000448404 RPL28P46779 137 aaKnown RBP9.99□□□□□ -0.81
SF1-211ENST00000448404 SPAG11BQ08648 103 aa9.99□□□□□ -0.81
SF1-211ENST00000448404 COPS9Q8WXC6 57 aa9.99□□□□□ -0.81
SF1-211ENST00000448404 XAGE1AQ9HD64 81 aa9.99□□□□□ -0.81
SF1-211ENST00000448404 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
SF1-211ENST00000448404 SDIM1Q6ZPB5 146 aa9.98□□□□□ -0.81
SF1-211ENST00000448404 C2orf48Q96LS8 159 aa9.98□□□□□ -0.81
SF1-211ENST00000448404 WIPF1O43516 503 aa9.97□□□□□ -0.81
SF1-211ENST00000448404 ESRGQ1W209 222 aa9.97□□□□□ -0.81
SF1-211ENST00000448404 COL7A1Q02388 2944 aa9.96□□□□□ -0.81
SF1-211ENST00000448404 DNAH3Q8TD57 4116 aa9.96□□□□□ -0.82
SF1-211ENST00000448404 HUWE1Q7Z6Z7 4374 aaKnown RBP9.95□□□□□ -0.82
SF1-211ENST00000448404 IGKV3D-7A0A0C4DH55 119 aa9.95□□□□□ -0.82
SF1-211ENST00000448404 CRYGAP11844 174 aa9.94□□□□□ -0.82
SF1-211ENST00000448404 CXCL5P42830 114 aa9.94□□□□□ -0.82
SF1-211ENST00000448404 A0A1B0GX51 115 aa9.93□□□□□ -0.82
SF1-211ENST00000448404 C14orf132Q9NPU4 83 aa9.93□□□□□ -0.82
SF1-211ENST00000448404 TRACP01848 142 aa9.93□□□□□ -0.82
SF1-211ENST00000448404 PRR34Q9NV39 138 aa9.93□□□□□ -0.82
SF1-211ENST00000448404 A0A087WVE0 104 aa9.92□□□□□ -0.82
SF1-211ENST00000448404 DNAL4O96015 105 aa9.92□□□□□ -0.82
SF1-211ENST00000448404 RPL18AQ02543 176 aaKnown RBP9.92□□□□□ -0.82
SF1-211ENST00000448404 ATOX1O00244 68 aa9.92□□□□□ -0.82
SF1-211ENST00000448404 C6orf48Q9UBA6 75 aa9.92□□□□□ -0.82
SF1-211ENST00000448404 DEFB131BA0A096LNP1 70 aa9.91□□□□□ -0.82
SF1-211ENST00000448404 C6orf99Q4VX62 202 aa9.91□□□□□ -0.82
SF1-211ENST00000448404 DSCR8Q96T75 97 aa9.91□□□□□ -0.82
SF1-211ENST00000448404 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
SF1-211ENST00000448404 DNAH10Q8IVF4 4471 aa9.89□□□□□ -0.83
SF1-211ENST00000448404 HIST1H4AP62805 103 aaKnown RBP9.89□□□□□ -0.83
SF1-211ENST00000448404 EGFEM1PQ0D2K5 195 aa9.89□□□□□ -0.83
SF1-211ENST00000448404 C11orf45Q8TAV5 145 aa9.89□□□□□ -0.83
SF1-211ENST00000448404 DPH3Q96FX2 82 aa9.88□□□□□ -0.83
SF1-211ENST00000448404 RPS28P62857 69 aaKnown RBP9.88□□□□□ -0.83
SF1-211ENST00000448404 S100A7L2Q5SY68 101 aa9.87□□□□□ -0.83
SF1-211ENST00000448404 IGKV2D-24A0A075B6R9 120 aa9.87□□□□□ -0.83
SF1-211ENST00000448404 OXTP01178 125 aa9.87□□□□□ -0.83
SF1-211ENST00000448404 C4orf26Q17RF5 130 aa9.86□□□□□ -0.83
SF1-211ENST00000448404 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
SF1-211ENST00000448404 CASC10Q5T4H9 136 aa9.86□□□□□ -0.83
SF1-211ENST00000448404 Q6ZRU5 148 aa9.86□□□□□ -0.83
SF1-211ENST00000448404 KRTAP26-1Q6PEX3 210 aa9.85□□□□□ -0.83
SF1-211ENST00000448404 CAMK2N2Q96S95 79 aa9.85□□□□□ -0.83
SF1-211ENST00000448404 ZNF561-AS1K7EIQ3 104 aa9.84□□□□□ -0.83
SF1-211ENST00000448404 SERP2Q8N6R1 65 aa9.84□□□□□ -0.83
SF1-211ENST00000448404 C15orf56Q8N910 161 aa9.84□□□□□ -0.83
SF1-211ENST00000448404 H0YGX0 51 aa9.83□□□□□ -0.84
SF1-211ENST00000448404 LINC01561Q8N1V8 128 aa9.83□□□□□ -0.84
SF1-211ENST00000448404 TRBV10-3A0A0K0K1G6 114 aa9.83□□□□□ -0.84
SF1-211ENST00000448404 HRCT1Q6UXD1 115 aa9.83□□□□□ -0.84
SF1-211ENST00000448404 TMEM258P61165 79 aa9.82□□□□□ -0.84
SF1-211ENST00000448404 COX17Q14061 63 aa9.82□□□□□ -0.84
SF1-211ENST00000448404 USP17L23D6RBM5 183 aa9.82□□□□□ -0.84
SF1-211ENST00000448404 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
SF1-211ENST00000448404 Q8N814 137 aa9.81□□□□□ -0.84
SF1-211ENST00000448404 K7EIL1 84 aa9.8□□□□□ -0.84
SF1-211ENST00000448404 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
SF1-211ENST00000448404 ORMDL1Q9P0S3 153 aa9.79□□□□□ -0.84
SF1-211ENST00000448404 NDUFC2O95298 119 aa9.79□□□□□ -0.84
SF1-211ENST00000448404 Q6JHZ5 121 aa9.78□□□□□ -0.84
SF1-211ENST00000448404 DNAH7Q8WXX0 4024 aa9.77□□□□□ -0.84
SF1-211ENST00000448404 Q6ZRP5 223 aa9.77□□□□□ -0.84
SF1-211ENST00000448404 LINC00588Q9Y4M8 146 aa9.77□□□□□ -0.84
SF1-211ENST00000448404 DNAH9Q9NYC9 4486 aa9.77□□□□□ -0.85
SF1-211ENST00000448404 Q5XG85 94 aa9.76□□□□□ -0.85
SF1-211ENST00000448404 DNAH1Q9P2D7 4330 aa9.76□□□□□ -0.85
SF1-211ENST00000448404 M0R2N4 97 aa9.75□□□□□ -0.85
SF1-211ENST00000448404 TRAV23DV6A0A075B6W5 121 aa9.75□□□□□ -0.85
SF1-211ENST00000448404 IGLV6-57P01721 117 aa9.74□□□□□ -0.85
SF1-211ENST00000448404 LINC00575Q6W349 94 aa9.74□□□□□ -0.85
SF1-211ENST00000448404 Q6ZQY7 126 aa9.74□□□□□ -0.85
SF1-211ENST00000448404 H3BNG1 76 aa9.74□□□□□ -0.85
SF1-211ENST00000448404 FAM168BA1KXE4 195 aa9.73□□□□□ -0.85
SF1-211ENST00000448404 LINC01556Q5JQF7 62 aa9.73□□□□□ -0.85
SF1-211ENST00000448404 GHRHP01286 108 aa9.72□□□□□ -0.85
SF1-211ENST00000448404 VPREB1P12018 145 aa9.72□□□□□ -0.85
SF1-211ENST00000448404 OBSCN-AS1Q96MR7 158 aa9.72□□□□□ -0.85
SF1-211ENST00000448404 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.85
SF1-211ENST00000448404 FAM19A1Q7Z5A9 133 aa9.71□□□□□ -0.85
SF1-211ENST00000448404 MDFIQ99750 246 aa9.71□□□□□ -0.86
SF1-211ENST00000448404 GVQW2A0A096LPI5 108 aaPredicted RBP9.7□□□□□ -0.86
SF1-211ENST00000448404 C20orf197Q8N268 126 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms