RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 SCGB1C2P0DMR2 95 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 DSCR10P59022 87 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 NPC2P61916 151 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 QRFPP83859 136 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 LINC00173Q6ZV60 143 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 PRR15Q8IV56 129 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 SPACA4Q8TDM5 124 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 CHCHD1Q96BP2 118 aaKnown RBP2.86□□□□□ -1.95
SDCBP-205ENST00000447267 FAM3DQ96BQ1 224 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 RNF185Q96GF1 192 aa2.86□□□□□ -1.95
SDCBP-205ENST00000447267 IGKV1D-8A0A087WSZ0 117 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 TRAV8-3A0A0A6YYJ7 113 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 PGPA6NDG6 321 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 H3BT86 120 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 ATOX1O00244 68 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 TCRAP04437 139 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 MGST1P10620 155 aaKnown RBP2.85□□□□□ -1.95
SDCBP-205ENST00000447267 GCHFRP30047 84 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 PSMB2P49721 201 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 ERVK-16P61578 105 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 SS18Q15532 418 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 Q8TAT8 98 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 ARHGAP5-AS1Q96IT6 56 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 RBM12B-AS1Q9P1G2 102 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 LAMTOR3Q9UHA4 124 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 ANAPC10Q9UM13 185 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 EPDR1Q9UM22 224 aa2.85□□□□□ -1.95
SDCBP-205ENST00000447267 TMSB15BA0A087X1C1 80 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 TRGV1A0A0A0MS02 117 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 LOC100131303A0A0U1RQF7 123 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 SSSCA1O60232 199 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 PPYP01298 95 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 IL4P05112 153 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 HERVK_113P61574 105 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 ZNF56Q15929 161 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 RNF182Q8N6D2 247 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 TMEM252Q8N6L7 170 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 C11orf72Q8NBR9 251 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 OR5C1Q8NGR4 320 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 CYSTM1Q9H1C7 97 aa2.84□□□□□ -1.95
SDCBP-205ENST00000447267 NXT2Q9NPJ8 142 aaKnown RBP2.84□□□□□ -1.95
SDCBP-205ENST00000447267 MDN1Q9NU22 5596 aa2.84□□□□□ -1.96
SDCBP-205ENST00000447267 TRBV19A0A075B6N1 114 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 CTXND1A0A1B0GTU2 59 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 CRYM-AS1A6NIL9 109 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 INS-IGF2F8WCM5 200 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 SYNGR2O43760 224 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 SPINK4O60575 86 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 UBE2L3P68036 154 aaKnown RBP2.83□□□□□ -1.96
SDCBP-205ENST00000447267 HBG1P69891 147 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 SERF2P84101 59 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 RPL18AQ02543 176 aaKnown RBP2.83□□□□□ -1.96
SDCBP-205ENST00000447267 Q6ZRP5 223 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 FP248Q71RG6 208 aaPredicted RBP2.83□□□□□ -1.96
SDCBP-205ENST00000447267 Q75L30 129 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 LINC00305Q7Z4B0 112 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 TMEM75Q8N9X5 138 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 MGST2Q99735 147 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 KRTAP4-3Q9BYR4 195 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 WDR83OSQ9Y284 106 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 V9GYV3 84 aa2.83□□□□□ -1.96
SDCBP-205ENST00000447267 IGLV1-50A0A075B6I6 118 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 TRBV7-6A0A0J9YX20 115 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 C8orf87E5RJ46 101 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 SMKR1H3BMG3 65 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 H3BVH4 76 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 NPYP01303 97 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 CXCL5P42830 114 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 UBE2D3P61077 147 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 HIST1H4AP62805 103 aaKnown RBP2.82□□□□□ -1.96
SDCBP-205ENST00000447267 UBE2D2P62837 147 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 HBG2P69892 147 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 ERCC8Q13216 396 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 ORMDL2Q53FV1 153 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 TMEM170BQ5T4T1 132 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 COPS9Q8WXC6 57 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 TXNDC17Q9BRA2 123 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 CCL28Q9NRJ3 127 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 TIMM9Q9Y5J7 89 aa2.82□□□□□ -1.96
SDCBP-205ENST00000447267 TRBV20OR9-2A0A075B6H5 130 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 MYMXA0A1B0GTQ4 84 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 SMIM27A0A1W2PRY6 76 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 C19orf71A6NCJ1 209 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 SLC25A20O43772 301 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 CST7O76096 145 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 C1orf100Q5SVJ3 147 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 LYZL2Q7Z4W2 148 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 C5orf38Q86SI9 138 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 SERP2Q8N6R1 65 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 OSTCQ9NRP0 149 aa2.81□□□□□ -1.96
SDCBP-205ENST00000447267 TRBV7-3A0A075B6L6 115 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 TRBV25-1A0A075B6N4 114 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 TRGV4A0A0C4DH28 118 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 IGKV2-24A0A0C4DH68 120 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 LOC107984156A0A0G2JMH3 177 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 MRPS12O15235 138 aaKnown RBP2.8□□□□□ -1.96
SDCBP-205ENST00000447267 ACYP1P07311 99 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 RNASE2P10153 161 aaKnown RBP2.8□□□□□ -1.96
SDCBP-205ENST00000447267 UBE2D1P51668 147 aa2.8□□□□□ -1.96
SDCBP-205ENST00000447267 SUB1P53999 127 aaKnown RBP eCLIP2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms