RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 TRAV12-1A0A0B4J245 112 aa6.2□□□□□ -1.42
PTPRN-208ENST00000446182 LOC389332A0A1B0GUA5 103 aa6.2□□□□□ -1.42
PTPRN-208ENST00000446182 DLEU1O43261 78 aa6.2□□□□□ -1.42
PTPRN-208ENST00000446182 TSPAN13O95857 204 aa6.2□□□□□ -1.42
PTPRN-208ENST00000446182 NPSP0C0P6 89 aa6.2□□□□□ -1.42
PTPRN-208ENST00000446182 PLNP26678 52 aa6.2□□□□□ -1.42
PTPRN-208ENST00000446182 TMEM141Q96I45 108 aa6.2□□□□□ -1.42
PTPRN-208ENST00000446182 SLC25A34Q6PIV7 304 aa6.19□□□□□ -1.42
PTPRN-208ENST00000446182 Q6ZN92 141 aa6.19□□□□□ -1.42
PTPRN-208ENST00000446182 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
PTPRN-208ENST00000446182 A0A087X002 238 aa6.18□□□□□ -1.42
PTPRN-208ENST00000446182 COL5A1-AS1Q5SY13 56 aa6.18□□□□□ -1.42
PTPRN-208ENST00000446182 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
PTPRN-208ENST00000446182 ZC2HC1BQ5TFG8 222 aa6.18□□□□□ -1.42
PTPRN-208ENST00000446182 BOD1L2Q8IYS8 172 aa6.18□□□□□ -1.42
PTPRN-208ENST00000446182 LINC00469Q8N7U9 141 aa6.18□□□□□ -1.42
PTPRN-208ENST00000446182 TOMM6Q96B49 74 aa6.18□□□□□ -1.42
PTPRN-208ENST00000446182 PRSS2P07478 247 aa6.17□□□□□ -1.42
PTPRN-208ENST00000446182 ERASQ7Z444 233 aa6.17□□□□□ -1.42
PTPRN-208ENST00000446182 XAGE1AQ9HD64 81 aa6.17□□□□□ -1.42
PTPRN-208ENST00000446182 TOMM7Q9P0U1 55 aa6.17□□□□□ -1.42
PTPRN-208ENST00000446182 CYSLTR1Q9Y271 337 aa6.17□□□□□ -1.42
PTPRN-208ENST00000446182 MUC17Q685J3 4493 aa6.17□□□□□ -1.42
PTPRN-208ENST00000446182 DPM2O94777 84 aa6.16□□□□□ -1.42
PTPRN-208ENST00000446182 COX8AP10176 69 aa6.16□□□□□ -1.42
PTPRN-208ENST00000446182 CKS1BP61024 79 aa6.16□□□□□ -1.42
PTPRN-208ENST00000446182 Q8IZM0 81 aa6.16□□□□□ -1.42
PTPRN-208ENST00000446182 AMELXQ99217 191 aa6.16□□□□□ -1.42
PTPRN-208ENST00000446182 TIMM17AQ99595 171 aa6.16□□□□□ -1.42
PTPRN-208ENST00000446182 TP73-AS1Q9UF72 201 aa6.16□□□□□ -1.42
PTPRN-208ENST00000446182 BCE1O60756 84 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 IGKCP01834 107 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 CRYGAP11844 174 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 RPL28P46779 137 aaKnown RBP6.15□□□□□ -1.42
PTPRN-208ENST00000446182 C6orf226Q5I0X4 101 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 MRPL55Q7Z7F7 128 aaKnown RBP6.15□□□□□ -1.42
PTPRN-208ENST00000446182 ATOH7Q8N100 152 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 TYMSOSQ8TAI1 123 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 SCGB3A1Q96QR1 104 aa6.15□□□□□ -1.42
PTPRN-208ENST00000446182 F8VRH5 84 aa6.14□□□□□ -1.43
PTPRN-208ENST00000446182 FAM19A3Q7Z5A8 133 aa6.14□□□□□ -1.43
PTPRN-208ENST00000446182 SNHG12Q9BXW3 62 aa6.14□□□□□ -1.43
PTPRN-208ENST00000446182 VCX2Q9H322 139 aa6.14□□□□□ -1.43
PTPRN-208ENST00000446182 ANAPC11Q9NYG5 84 aa6.13□□□□□ -1.43
PTPRN-208ENST00000446182 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 H0Y8G0 127 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 HERVK_113P61574 105 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 SEC11AP67812 179 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 KRTAP13-2Q52LG2 175 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 LINC00167Q96N53 147 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 HIGD1BQ9P298 99 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 CDKN2A-AS1Q9UH64 79 aa6.12□□□□□ -1.43
PTPRN-208ENST00000446182 RPL37AP8A6NKH3 93 aa6.11□□□□□ -1.43
PTPRN-208ENST00000446182 HERVK_113P63121 156 aa6.11□□□□□ -1.43
PTPRN-208ENST00000446182 TAL2Q16559 108 aa6.11□□□□□ -1.43
PTPRN-208ENST00000446182 KRTAP13-1Q8IUC0 172 aa6.11□□□□□ -1.43
PTPRN-208ENST00000446182 RETNLBQ9BQ08 111 aa6.11□□□□□ -1.43
PTPRN-208ENST00000446182 A6NDN8 102 aa6.1□□□□□ -1.43
PTPRN-208ENST00000446182 CXCL5P42830 114 aa6.1□□□□□ -1.43
PTPRN-208ENST00000446182 HSD52Q0P140 79 aa6.1□□□□□ -1.43
PTPRN-208ENST00000446182 PMVKQ15126 192 aa6.1□□□□□ -1.43
PTPRN-208ENST00000446182 CHTOPQ9Y3Y2 248 aaKnown RBP6.1□□□□□ -1.43
PTPRN-208ENST00000446182 GAGE10A6NGK3 116 aa6.09□□□□□ -1.43
PTPRN-208ENST00000446182 KRTAP9-7A8MTY7 169 aa6.09□□□□□ -1.43
PTPRN-208ENST00000446182 GEMIN7Q9H840 131 aaKnown RBP6.09□□□□□ -1.43
PTPRN-208ENST00000446182 IGLV5-37A0A075B6J1 123 aa6.08□□□□□ -1.44
PTPRN-208ENST00000446182 SMIM1B2RUZ4 78 aa6.08□□□□□ -1.44
PTPRN-208ENST00000446182 UBE2AP49459 152 aa6.08□□□□□ -1.44
PTPRN-208ENST00000446182 TPRXLQ17RH7 258 aa6.08□□□□□ -1.44
PTPRN-208ENST00000446182 FAM229BQ4G0N7 80 aa6.08□□□□□ -1.44
PTPRN-208ENST00000446182 LINC00304Q8N9R0 145 aa6.08□□□□□ -1.44
PTPRN-208ENST00000446182 E9PLD3 99 aa6.07□□□□□ -1.44
PTPRN-208ENST00000446182 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
PTPRN-208ENST00000446182 C11orf86A6NJI1 115 aa6.06□□□□□ -1.44
PTPRN-208ENST00000446182 NMUP48645 174 aa6.06□□□□□ -1.44
PTPRN-208ENST00000446182 BVES-AS1Q5T3Y7 98 aa6.06□□□□□ -1.44
PTPRN-208ENST00000446182 COX7B2Q8TF08 81 aa6.06□□□□□ -1.44
PTPRN-208ENST00000446182 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
PTPRN-208ENST00000446182 CST9LQ9H4G1 147 aa6.06□□□□□ -1.44
PTPRN-208ENST00000446182 IGLV7-46A0A075B6I9 117 aa6.05□□□□□ -1.44
PTPRN-208ENST00000446182 IGLV5-45A0A087WSX0 123 aa6.05□□□□□ -1.44
PTPRN-208ENST00000446182 BATFQ16520 125 aa6.05□□□□□ -1.44
PTPRN-208ENST00000446182 NKAPP1Q8N9T2 125 aa6.05□□□□□ -1.44
PTPRN-208ENST00000446182 IGKV2D-26A0A0A0MRZ7 120 aa6.04□□□□□ -1.44
PTPRN-208ENST00000446182 MYMXA0A1B0GTQ4 84 aa6.04□□□□□ -1.44
PTPRN-208ENST00000446182 A0A1B0GV90 55 aa6.04□□□□□ -1.44
PTPRN-208ENST00000446182 TMEM238LA0A1B0GVL6 79 aa6.04□□□□□ -1.44
PTPRN-208ENST00000446182 TINCRA0A1B0GVN0 87 aa6.04□□□□□ -1.44
PTPRN-208ENST00000446182 A6NJY4 79 aa6.04□□□□□ -1.44
PTPRN-208ENST00000446182 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
PTPRN-208ENST00000446182 LCE2DQ5TA82 110 aaPredicted RBP6.04□□□□□ -1.44
PTPRN-208ENST00000446182 IGKV2-28A0A075B6P5 120 aa6.03□□□□□ -1.44
PTPRN-208ENST00000446182 IGKV2D-28P01615 120 aa6.03□□□□□ -1.44
PTPRN-208ENST00000446182 PRLHP81277 87 aa6.03□□□□□ -1.44
PTPRN-208ENST00000446182 C2orf91Q6ZV80 131 aa6.03□□□□□ -1.44
PTPRN-208ENST00000446182 PLEKHB2Q96CS7 222 aa6.03□□□□□ -1.44
PTPRN-208ENST00000446182 H3BRM9 83 aa6.02□□□□□ -1.45
PTPRN-208ENST00000446182 SPINK8P0C7L1 97 aa6.02□□□□□ -1.45
PTPRN-208ENST00000446182 VPREB1P12018 145 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms