RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 ERHP84090 104 aaKnown RBP1.43□□□□□ -2.18
PGBD4P3-201ENST00000440731 DEFB113Q30KQ7 82 aa1.43□□□□□ -2.18
PGBD4P3-201ENST00000440731 KRTAP25-1Q3LHN0 102 aa1.43□□□□□ -2.18
PGBD4P3-201ENST00000440731 KRTAP26-1Q6PEX3 210 aa1.43□□□□□ -2.18
PGBD4P3-201ENST00000440731 GAFA1Q96PS6 74 aa1.43□□□□□ -2.18
PGBD4P3-201ENST00000440731 ESPL1Q14674 2120 aa1.43□□□□□ -2.18
PGBD4P3-201ENST00000440731 MDC1Q14676 2089 aaKnown RBP1.43□□□□□ -2.18
PGBD4P3-201ENST00000440731 KIAA0100Q14667 2235 aaKnown RBP1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 DIDO1Q9BTC0 2240 aaKnown RBP1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 ETDCA0A1B0GVM5 59 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 NUPR2A6NF83 97 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 UQCR11O14957 56 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 CCL18P55774 89 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 SPINK7P58062 85 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 LINC00308Q8TCZ7 52 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 CRCT1Q9UGL9 99 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 ARFGEF3Q5TH69 2177 aa1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 TNRC6BQ9UPQ9 1833 aaKnown RBP1.42□□□□□ -2.18
PGBD4P3-201ENST00000440731 PKD1L2Q7Z442 2459 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 IGHV3-64A0A075B6Q5 118 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 TRGV2A0A075B6R0 118 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 TRGV4A0A0C4DH28 118 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 IGKV2-29A2NJV5 120 aaPredicted RBP1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 NDUFA1O15239 70 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 CCL3L1P16619 93 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 CRIP1P50238 77 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 DEFB112Q30KQ8 113 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 SPATA8Q6RVD6 105 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 COA5Q86WW8 74 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 ZGRF1Q86YA3 2104 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 KCNQ1DNQ9H478 68 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 DNAJC13O75165 2243 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 ARHGAP32A7KAX9 2087 aa1.41□□□□□ -2.18
PGBD4P3-201ENST00000440731 FREM3P0C091 2139 aa1.4□□□□□ -2.18
PGBD4P3-201ENST00000440731 PRRC2BQ5JSZ5 2229 aaKnown RBP1.4□□□□□ -2.18
PGBD4P3-201ENST00000440731 FREM1Q5H8C1 2179 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 IGKV3-7A0A075B6H7 116 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 PIGYQ3MUY2 71 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 Q6ZTI0 123 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 SPRR4Q96PI1 79 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 MINOS1-NBL1R4GNA1 71 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 CEP192Q8TEP8 1941 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 MED12Q93074 2177 aa1.4□□□□□ -2.19
PGBD4P3-201ENST00000440731 RNASE3P12724 160 aaKnown RBP1.39□□□□□ -2.19
PGBD4P3-201ENST00000440731 PRCDQ00LT1 54 aa1.39□□□□□ -2.19
PGBD4P3-201ENST00000440731 SPINK9Q5DT21 86 aa1.39□□□□□ -2.19
PGBD4P3-201ENST00000440731 C9orf163Q8N9P6 203 aa1.39□□□□□ -2.19
PGBD4P3-201ENST00000440731 SMIM11BQ8TCY0 68 aa1.39□□□□□ -2.19
PGBD4P3-201ENST00000440731 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.38□□□□□ -2.19
PGBD4P3-201ENST00000440731 IGKV3OR2-268A0A0C4DH90 116 aa1.38□□□□□ -2.19
PGBD4P3-201ENST00000440731 LINC00959A0A1B0GUT2 108 aa1.38□□□□□ -2.19
PGBD4P3-201ENST00000440731 POLR2KP53803 58 aaKnown RBP1.38□□□□□ -2.19
PGBD4P3-201ENST00000440731 CACNA1AO00555 2505 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 CR1P17927 2039 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 DOCK10Q96BY6 2186 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 TRBV6-4A0A1B0GX49 114 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 J3QKU1 62 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 MRPL33O75394 65 aaKnown RBP1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 COX7BP24311 80 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 COX17Q14061 63 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 COL4A2P08572 1712 aa1.37□□□□□ -2.19
PGBD4P3-201ENST00000440731 TNCP24821 2201 aa1.36□□□□□ -2.19
PGBD4P3-201ENST00000440731 CUL9Q8IWT3 2517 aa1.36□□□□□ -2.19
PGBD4P3-201ENST00000440731 A0A1B0GU33 70 aa1.36□□□□□ -2.19
PGBD4P3-201ENST00000440731 LINC00158P58513 81 aa1.36□□□□□ -2.19
PGBD4P3-201ENST00000440731 MALRD1Q5VYJ5 2156 aa1.36□□□□□ -2.19
PGBD4P3-201ENST00000440731 C4orf3Q8WVX3 66 aa1.36□□□□□ -2.19
PGBD4P3-201ENST00000440731 RPL39LQ96EH5 51 aaKnown RBP1.36□□□□□ -2.19
PGBD4P3-201ENST00000440731 RP1L1Q8IWN7 2480 aaPredicted RBP1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 SPAG17Q6Q759 2223 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 A0A087WTM6 91 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 DEFB131BA0A096LNP1 70 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 TRGV1A0A0A0MS02 117 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 A0A1B0GU69 56 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 H3BRN7 92 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 PRB1P04280 392 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 RPL39P62891 51 aaKnown RBP1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 KRTAP13-4Q3LI77 160 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 PATE1Q8WXA2 126 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 LINC00472Q9H8W2 130 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 CACNA1CQ13936 2221 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 SORL1Q92673 2214 aa1.35□□□□□ -2.19
PGBD4P3-201ENST00000440731 PDE4DIPQ5VU43 2346 aa1.34□□□□□ -2.19
PGBD4P3-201ENST00000440731 IGKV2-40A0A087WW87 121 aaPredicted RBP1.34□□□□□ -2.19
PGBD4P3-201ENST00000440731 M0R2N4 97 aa1.34□□□□□ -2.19
PGBD4P3-201ENST00000440731 IGKV2D-40P01614 121 aaPredicted RBP1.34□□□□□ -2.19
PGBD4P3-201ENST00000440731 LINC00575Q6W349 94 aa1.34□□□□□ -2.19
PGBD4P3-201ENST00000440731 Q6ZQY7 126 aa1.34□□□□□ -2.19
PGBD4P3-201ENST00000440731 DEFB132Q7Z7B7 95 aa1.34□□□□□ -2.19
PGBD4P3-201ENST00000440731 BAHCC1Q9P281 2608 aa1.34□□□□□ -2.2
PGBD4P3-201ENST00000440731 MUC6Q6W4X9 2439 aa1.34□□□□□ -2.2
PGBD4P3-201ENST00000440731 SDK1Q7Z5N4 2213 aa1.34□□□□□ -2.2
PGBD4P3-201ENST00000440731 ALPK2Q86TB3 2170 aa1.33□□□□□ -2.2
PGBD4P3-201ENST00000440731 PRB3Q04118 309 aaPredicted RBP1.33□□□□□ -2.2
PGBD4P3-201ENST00000440731 Q8IZM0 81 aa1.33□□□□□ -2.2
PGBD4P3-201ENST00000440731 ABCA4P78363 2273 aa1.33□□□□□ -2.2
PGBD4P3-201ENST00000440731 OTOGLQ3ZCN5 2332 aa1.33□□□□□ -2.2
PGBD4P3-201ENST00000440731 COL4A5P29400 1685 aa1.32□□□□□ -2.2
PGBD4P3-201ENST00000440731 KNTC1P50748 2209 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms