RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 KMT2BQ9UMN6 2715 aaPredicted RBP6.91□□□□□ -1.3
CDC42SE1-202ENST00000439374 SS18Q15532 418 aa6.91□□□□□ -1.3
CDC42SE1-202ENST00000439374 DEFB121Q5J5C9 76 aa6.91□□□□□ -1.3
CDC42SE1-202ENST00000439374 BRK1Q8WUW1 75 aa6.91□□□□□ -1.3
CDC42SE1-202ENST00000439374 AKAP9Q99996 3911 aa6.91□□□□□ -1.3
CDC42SE1-202ENST00000439374 PRR4Q16378 134 aa6.91□□□□□ -1.3
CDC42SE1-202ENST00000439374 NSD1Q96L73 2696 aaPredicted RBP6.9□□□□□ -1.3
CDC42SE1-202ENST00000439374 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.31
CDC42SE1-202ENST00000439374 TRAV10A0A0B4J240 114 aa6.89□□□□□ -1.31
CDC42SE1-202ENST00000439374 H0YGX0 51 aa6.89□□□□□ -1.31
CDC42SE1-202ENST00000439374 KRTAP10-3P60369 221 aa6.89□□□□□ -1.31
CDC42SE1-202ENST00000439374 Q6ZQY7 126 aa6.89□□□□□ -1.31
CDC42SE1-202ENST00000439374 TRBV6-4A0A1B0GX49 114 aa6.89□□□□□ -1.31
CDC42SE1-202ENST00000439374 CRYGAP11844 174 aa6.89□□□□□ -1.31
CDC42SE1-202ENST00000439374 KLK12Q9UKR0 248 aa6.89□□□□□ -1.31
CDC42SE1-202ENST00000439374 F8WEM9 126 aa6.88□□□□□ -1.31
CDC42SE1-202ENST00000439374 LINC00474Q9P2X8 69 aa6.88□□□□□ -1.31
CDC42SE1-202ENST00000439374 FAM236DA0A1B0GTK5 79 aa6.88□□□□□ -1.31
CDC42SE1-202ENST00000439374 FAM236CP0DP71 79 aa6.88□□□□□ -1.31
CDC42SE1-202ENST00000439374 LINC00959A0A1B0GUT2 108 aa6.88□□□□□ -1.31
CDC42SE1-202ENST00000439374 KRTAP1-1Q07627 177 aa6.88□□□□□ -1.31
CDC42SE1-202ENST00000439374 PKD1L1Q8TDX9 2849 aa6.87□□□□□ -1.31
CDC42SE1-202ENST00000439374 IGLV5-45A0A087WSX0 123 aa6.87□□□□□ -1.31
CDC42SE1-202ENST00000439374 PLAC8L1A1L4L8 177 aa6.87□□□□□ -1.31
CDC42SE1-202ENST00000439374 PRO0255Q9UI72 69 aa6.87□□□□□ -1.31
CDC42SE1-202ENST00000439374 TMEM258P61165 79 aa6.87□□□□□ -1.31
CDC42SE1-202ENST00000439374 Q6JHZ5 121 aa6.87□□□□□ -1.31
CDC42SE1-202ENST00000439374 FBN1P35555 2871 aaKnown RBP6.87□□□□□ -1.31
CDC42SE1-202ENST00000439374 C3orf84H3BNL1 204 aa6.86□□□□□ -1.31
CDC42SE1-202ENST00000439374 OXLD1Q5BKU9 147 aa6.86□□□□□ -1.31
CDC42SE1-202ENST00000439374 HIGD2BQ4VC39 106 aa6.86□□□□□ -1.31
CDC42SE1-202ENST00000439374 UNQ6190/PRO20217Q6UXQ8 127 aa6.86□□□□□ -1.31
CDC42SE1-202ENST00000439374 RETNQ9HD89 108 aa6.86□□□□□ -1.31
CDC42SE1-202ENST00000439374 C19orf73Q9NVV2 129 aa6.86□□□□□ -1.31
CDC42SE1-202ENST00000439374 CCKP06307 115 aa6.85□□□□□ -1.31
CDC42SE1-202ENST00000439374 CELA1Q9UNI1 258 aa6.85□□□□□ -1.31
CDC42SE1-202ENST00000439374 IGHV3OR16-9A0A0B4J2B5 98 aa6.85□□□□□ -1.31
CDC42SE1-202ENST00000439374 Q8N814 137 aa6.85□□□□□ -1.31
CDC42SE1-202ENST00000439374 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
CDC42SE1-202ENST00000439374 LINC00336Q6ZUF6 198 aa6.84□□□□□ -1.31
CDC42SE1-202ENST00000439374 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
CDC42SE1-202ENST00000439374 CSNK1G2-AS1Q8NCQ2 148 aa6.84□□□□□ -1.31
CDC42SE1-202ENST00000439374 OVOL2Q9BRP0 275 aa6.84□□□□□ -1.31
CDC42SE1-202ENST00000439374 TRRAPQ9Y4A5 3859 aa6.84□□□□□ -1.31
CDC42SE1-202ENST00000439374 IBA57-AS1B1ANH7 110 aa6.84□□□□□ -1.32
CDC42SE1-202ENST00000439374 NANOS2P60321 138 aaKnown RBP6.84□□□□□ -1.32
CDC42SE1-202ENST00000439374 REG3AQ06141 175 aa6.84□□□□□ -1.32
CDC42SE1-202ENST00000439374 TM2D3Q9BRN9 247 aa6.83□□□□□ -1.32
CDC42SE1-202ENST00000439374 C9orf66Q5T8R8 295 aa6.82□□□□□ -1.32
CDC42SE1-202ENST00000439374 Q8NDZ9 215 aa6.82□□□□□ -1.32
CDC42SE1-202ENST00000439374 TMEM256-PLSCR3K7ERE1 68 aa6.81□□□□□ -1.32
CDC42SE1-202ENST00000439374 X6R8D5 127 aa6.81□□□□□ -1.32
CDC42SE1-202ENST00000439374 APOC4P55056 127 aa6.81□□□□□ -1.32
CDC42SE1-202ENST00000439374 A0A087WZ39 114 aa6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 SPAG11BQ08648 103 aa6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 IL17DQ8TAD2 202 aa6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 C16orf95Q9H693 158 aa6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 LINC01547P58512 204 aaPredicted RBP6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 BPY2O14599 106 aa6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 SPART-AS1P0CW21 52 aa6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 Q6ZVQ6 151 aa6.8□□□□□ -1.32
CDC42SE1-202ENST00000439374 JMJD7-PLA2G4BH0Y9G9 81 aa6.79□□□□□ -1.32
CDC42SE1-202ENST00000439374 IGHV4-30-4P0DP06 118 aa6.79□□□□□ -1.32
CDC42SE1-202ENST00000439374 Q5XG85 94 aa6.79□□□□□ -1.32
CDC42SE1-202ENST00000439374 TRBV10-3A0A0K0K1G6 114 aa6.78□□□□□ -1.32
CDC42SE1-202ENST00000439374 CYSRT1A8MQ03 144 aa6.77□□□□□ -1.33
CDC42SE1-202ENST00000439374 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
CDC42SE1-202ENST00000439374 DEFB116Q30KQ4 102 aa6.76□□□□□ -1.33
CDC42SE1-202ENST00000439374 FAM30AQ9NZY2 134 aa6.76□□□□□ -1.33
CDC42SE1-202ENST00000439374 IGKV2D-24A0A075B6R9 120 aa6.75□□□□□ -1.33
CDC42SE1-202ENST00000439374 LINC01600Q96MT4 127 aa6.75□□□□□ -1.33
CDC42SE1-202ENST00000439374 TENM3Q9P273 2699 aa6.75□□□□□ -1.33
CDC42SE1-202ENST00000439374 A0A0G2JQZ4 141 aa6.74□□□□□ -1.33
CDC42SE1-202ENST00000439374 A0A1W2PNN7 141 aa6.74□□□□□ -1.33
CDC42SE1-202ENST00000439374 H7BZZ5 65 aa6.74□□□□□ -1.33
CDC42SE1-202ENST00000439374 CD164L2Q6UWJ8 174 aa6.74□□□□□ -1.33
CDC42SE1-202ENST00000439374 LYRM9A8MSI8 78 aa6.74□□□□□ -1.33
CDC42SE1-202ENST00000439374 NDUFC2O95298 119 aa6.73□□□□□ -1.33
CDC42SE1-202ENST00000439374 WFDC10BQ8IUB3 73 aa6.73□□□□□ -1.33
CDC42SE1-202ENST00000439374 CAMK2N2Q96S95 79 aa6.73□□□□□ -1.33
CDC42SE1-202ENST00000439374 TRBV7-6A0A0J9YX20 115 aa6.73□□□□□ -1.33
CDC42SE1-202ENST00000439374 Q6ZTC4 211 aa6.73□□□□□ -1.33
CDC42SE1-202ENST00000439374 LINC00575Q6W349 94 aa6.73□□□□□ -1.33
CDC42SE1-202ENST00000439374 HIGD2AQ9BW72 106 aa6.73□□□□□ -1.33
CDC42SE1-202ENST00000439374 NREPQ16612 68 aa6.72□□□□□ -1.33
CDC42SE1-202ENST00000439374 PSPHP1O15172 72 aa6.72□□□□□ -1.33
CDC42SE1-202ENST00000439374 RPL37AP8A6NKH3 93 aa6.71□□□□□ -1.33
CDC42SE1-202ENST00000439374 LYPD5Q6UWN5 251 aa6.71□□□□□ -1.33
CDC42SE1-202ENST00000439374 Q6ZQT0 140 aa6.71□□□□□ -1.33
CDC42SE1-202ENST00000439374 MIFP14174 115 aa6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 RPS28P62857 69 aaKnown RBP6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 FAM229BQ4G0N7 80 aa6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 KPRPQ5T749 579 aaPredicted RBP6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 Q8IZM0 81 aa6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 DIRC1Q969H9 104 aa6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 MUC7Q8TAX7 377 aa6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 ANK3Q12955 4377 aaKnown RBP6.71□□□□□ -1.34
CDC42SE1-202ENST00000439374 TRAV7A0A075B6U4 112 aa6.7□□□□□ -1.34
CDC42SE1-202ENST00000439374 A0A1B0GUV1 79 aa6.69□□□□□ -1.34
CDC42SE1-202ENST00000439374 COX7BP24311 80 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms