RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 TNP2Q05952 138 aa7.6□□□□□ -1.19
SNHG3-202ENST00000437681 Q8N3U1 123 aa7.6□□□□□ -1.19
SNHG3-202ENST00000437681 Q8N814 137 aa7.6□□□□□ -1.19
SNHG3-202ENST00000437681 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
SNHG3-202ENST00000437681 PMAIP1Q13794 54 aa7.59□□□□□ -1.19
SNHG3-202ENST00000437681 FAT2Q9NYQ8 4349 aa7.59□□□□□ -1.19
SNHG3-202ENST00000437681 FAM104AQ969W3 186 aa7.59□□□□□ -1.19
SNHG3-202ENST00000437681 CHCHD10Q8WYQ3 142 aaPredicted RBP7.58□□□□□ -1.2
SNHG3-202ENST00000437681 Q9HAA7 133 aa7.58□□□□□ -1.2
SNHG3-202ENST00000437681 IGHV1-58A0A0C4DH39 117 aa7.58□□□□□ -1.2
SNHG3-202ENST00000437681 BRK1Q8WUW1 75 aa7.58□□□□□ -1.2
SNHG3-202ENST00000437681 PLEKHB2Q96CS7 222 aa7.58□□□□□ -1.2
SNHG3-202ENST00000437681 PLNP26678 52 aa7.57□□□□□ -1.2
SNHG3-202ENST00000437681 CYSTM1Q9H1C7 97 aa7.57□□□□□ -1.2
SNHG3-202ENST00000437681 GVQW2A0A096LPI5 108 aaPredicted RBP7.57□□□□□ -1.2
SNHG3-202ENST00000437681 CNBPP62633 177 aaKnown RBP7.57□□□□□ -1.2
SNHG3-202ENST00000437681 RPL39P62891 51 aaKnown RBP7.57□□□□□ -1.2
SNHG3-202ENST00000437681 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
SNHG3-202ENST00000437681 SCGB3A1Q96QR1 104 aa7.56□□□□□ -1.2
SNHG3-202ENST00000437681 TRAV13-1A0A0B4J241 112 aa7.56□□□□□ -1.2
SNHG3-202ENST00000437681 CFC1BP0CG36 223 aa7.56□□□□□ -1.2
SNHG3-202ENST00000437681 CFC1P0CG37 223 aa7.56□□□□□ -1.2
SNHG3-202ENST00000437681 hADV29S1A0JD25 119 aa7.55□□□□□ -1.2
SNHG3-202ENST00000437681 TMEM258P61165 79 aa7.55□□□□□ -1.2
SNHG3-202ENST00000437681 TRAV12-1A0A0B4J245 112 aa7.55□□□□□ -1.2
SNHG3-202ENST00000437681 TRACP01848 142 aa7.55□□□□□ -1.2
SNHG3-202ENST00000437681 CRYGAP11844 174 aa7.55□□□□□ -1.2
SNHG3-202ENST00000437681 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
SNHG3-202ENST00000437681 RPL13AP40429 203 aaKnown RBP7.54□□□□□ -1.2
SNHG3-202ENST00000437681 SCGB1D4Q6XE38 83 aa7.54□□□□□ -1.2
SNHG3-202ENST00000437681 HECTD4Q9Y4D8 3996 aa7.54□□□□□ -1.2
SNHG3-202ENST00000437681 IGLV5-45A0A087WSX0 123 aa7.54□□□□□ -1.2
SNHG3-202ENST00000437681 F8VRH5 84 aa7.54□□□□□ -1.2
SNHG3-202ENST00000437681 COX7A2LO14548 114 aa7.54□□□□□ -1.2
SNHG3-202ENST00000437681 USP17L23D6RBM5 183 aa7.53□□□□□ -1.2
SNHG3-202ENST00000437681 A0A087WZ39 114 aa7.53□□□□□ -1.2
SNHG3-202ENST00000437681 IGHV3OR16-9A0A0B4J2B5 98 aa7.53□□□□□ -1.2
SNHG3-202ENST00000437681 TRBV7-7A0A0K0K1E9 115 aa7.53□□□□□ -1.2
SNHG3-202ENST00000437681 PRO1854Q9UHT4 67 aa7.52□□□□□ -1.21
SNHG3-202ENST00000437681 DNAH11Q96DT5 4516 aa7.52□□□□□ -1.21
SNHG3-202ENST00000437681 DYNC1H1Q14204 4646 aaKnown RBP7.52□□□□□ -1.21
SNHG3-202ENST00000437681 PKD1P98161 4303 aa7.52□□□□□ -1.21
SNHG3-202ENST00000437681 COX7CP15954 63 aa7.51□□□□□ -1.21
SNHG3-202ENST00000437681 LINC00242Q5T6M2 205 aa7.51□□□□□ -1.21
SNHG3-202ENST00000437681 LINC01600Q96MT4 127 aa7.51□□□□□ -1.21
SNHG3-202ENST00000437681 IGHV3-64A0A075B6Q5 118 aa7.51□□□□□ -1.21
SNHG3-202ENST00000437681 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.51□□□□□ -1.21
SNHG3-202ENST00000437681 CLPSL2Q6UWE3 100 aa7.51□□□□□ -1.21
SNHG3-202ENST00000437681 C15orf56Q8N910 161 aa7.51□□□□□ -1.21
SNHG3-202ENST00000437681 IGLV5-52A0A0A0MRZ9 124 aa7.5□□□□□ -1.21
SNHG3-202ENST00000437681 CDK2AP2O75956 126 aa7.5□□□□□ -1.21
SNHG3-202ENST00000437681 IGLV10-54A0A075B6I4 117 aa7.5□□□□□ -1.21
SNHG3-202ENST00000437681 DEFB104AQ8WTQ1 72 aa7.49□□□□□ -1.21
SNHG3-202ENST00000437681 EIF4EBP3O60516 100 aaPredicted RBP7.49□□□□□ -1.21
SNHG3-202ENST00000437681 XCL1P47992 114 aa7.49□□□□□ -1.21
SNHG3-202ENST00000437681 C9orf163Q8N9P6 203 aa7.49□□□□□ -1.21
SNHG3-202ENST00000437681 NDUFC2O95298 119 aa7.48□□□□□ -1.21
SNHG3-202ENST00000437681 CXCL5P42830 114 aa7.48□□□□□ -1.21
SNHG3-202ENST00000437681 TRBV10-2A0A0K0K1G8 114 aa7.48□□□□□ -1.21
SNHG3-202ENST00000437681 C16orf90A8MZG2 172 aa7.48□□□□□ -1.21
SNHG3-202ENST00000437681 ATXN8Q156A1 80 aa7.48□□□□□ -1.21
SNHG3-202ENST00000437681 H7C2G1 150 aa7.47□□□□□ -1.21
SNHG3-202ENST00000437681 KRTAP10-2P60368 255 aa7.47□□□□□ -1.21
SNHG3-202ENST00000437681 OPRPNQ99935 248 aaPredicted RBP7.47□□□□□ -1.21
SNHG3-202ENST00000437681 FAM240AA0A1B0GVK7 77 aa7.47□□□□□ -1.21
SNHG3-202ENST00000437681 ZNF22P17026 224 aaPredicted RBP7.47□□□□□ -1.21
SNHG3-202ENST00000437681 Q6ZSA8 131 aa7.47□□□□□ -1.21
SNHG3-202ENST00000437681 Q8IZM0 81 aa7.47□□□□□ -1.21
SNHG3-202ENST00000437681 DNAH8Q96JB1 4490 aa7.46□□□□□ -1.22
SNHG3-202ENST00000437681 IGLV4-69A0A075B6H9 119 aa7.46□□□□□ -1.22
SNHG3-202ENST00000437681 IGKV3OR2-268A0A0C4DH90 116 aa7.46□□□□□ -1.22
SNHG3-202ENST00000437681 TRBV30A0A0K0K1B3 111 aa7.46□□□□□ -1.22
SNHG3-202ENST00000437681 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
SNHG3-202ENST00000437681 IMUPQ9GZP8 106 aa7.46□□□□□ -1.22
SNHG3-202ENST00000437681 LINC00474Q9P2X8 69 aa7.46□□□□□ -1.22
SNHG3-202ENST00000437681 CIRBPQ14011 172 aaKnown RBP7.45□□□□□ -1.22
SNHG3-202ENST00000437681 C2orf82Q6UX34 121 aa7.45□□□□□ -1.22
SNHG3-202ENST00000437681 MRPL55Q7Z7F7 128 aaKnown RBP7.45□□□□□ -1.22
SNHG3-202ENST00000437681 RNASE13Q5GAN3 156 aaKnown RBP7.44□□□□□ -1.22
SNHG3-202ENST00000437681 HERVK_113P61574 105 aa7.44□□□□□ -1.22
SNHG3-202ENST00000437681 TSPEAR-AS2P59090 65 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 COX6A2Q02221 97 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 SPAG11BQ08648 103 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 SYCNQ0VAF6 134 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 BIRC6Q9NR09 4857 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 IGLV5-39A0A0G2JS06 123 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 C11orf86A6NJI1 115 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 NDUFA1O15239 70 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 KIAA0087Q14695 138 aa7.43□□□□□ -1.22
SNHG3-202ENST00000437681 A0A0J9YXV3 536 aa7.42□□□□□ -1.22
SNHG3-202ENST00000437681 TMEM170BQ5T4T1 132 aa7.42□□□□□ -1.22
SNHG3-202ENST00000437681 EPM2AB3EWF7 344 aa7.42□□□□□ -1.22
SNHG3-202ENST00000437681 Q1RN00 199 aa7.42□□□□□ -1.22
SNHG3-202ENST00000437681 C5orf38Q86SI9 138 aa7.42□□□□□ -1.22
SNHG3-202ENST00000437681 A0A0B4J2C4 111 aa7.41□□□□□ -1.22
SNHG3-202ENST00000437681 TRIAP1O43715 76 aa7.41□□□□□ -1.22
SNHG3-202ENST00000437681 DNAH5Q8TE73 4624 aa7.41□□□□□ -1.22
SNHG3-202ENST00000437681 SMIM1B2RUZ4 78 aa7.41□□□□□ -1.22
SNHG3-202ENST00000437681 PRSS2P07478 247 aa7.41□□□□□ -1.22
SNHG3-202ENST00000437681 SDIM1Q6ZPB5 146 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms