RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 COL14A1Q05707 1796 aaKnown RBP-1.85□□□□□ -2.71
LINC01239-201ENST00000433645 CUBNO60494 3623 aa-1.85□□□□□ -2.71
LINC01239-201ENST00000433645 SHPRHQ149N8 1683 aa-1.86□□□□□ -2.71
LINC01239-201ENST00000433645 H0YGG7 62 aa-1.86□□□□□ -2.71
LINC01239-201ENST00000433645 H3BQ15 152 aa-1.86□□□□□ -2.71
LINC01239-201ENST00000433645 SNCAP37840 140 aa-1.86□□□□□ -2.71
LINC01239-201ENST00000433645 ANKRD11Q6UB99 2663 aaPredicted RBP-1.86□□□□□ -2.71
LINC01239-201ENST00000433645 ARHGAP5Q13017 1502 aa-1.86□□□□□ -2.71
LINC01239-201ENST00000433645 A0A087WVE0 104 aa-1.87□□□□□ -2.71
LINC01239-201ENST00000433645 H3BQF6 201 aa-1.87□□□□□ -2.71
LINC01239-201ENST00000433645 CHD1O14646 1710 aa-1.87□□□□□ -2.71
LINC01239-201ENST00000433645 A0A0G2JND7 137 aa-1.88□□□□□ -2.71
LINC01239-201ENST00000433645 CGREF1Q99674 301 aa-1.88□□□□□ -2.71
LINC01239-201ENST00000433645 BIRC6Q9NR09 4857 aa-1.88□□□□□ -2.71
LINC01239-201ENST00000433645 NRKQ7Z2Y5 1582 aa-1.89□□□□□ -2.71
LINC01239-201ENST00000433645 PDE4DIPQ5VU43 2346 aa-1.89□□□□□ -2.71
LINC01239-201ENST00000433645 CDKN2A-AS1Q9UH64 79 aa-1.89□□□□□ -2.71
LINC01239-201ENST00000433645 DMXL1Q9Y485 3027 aa-1.89□□□□□ -2.71
LINC01239-201ENST00000433645 CICQ96RK0 1608 aaPredicted RBP-1.9□□□□□ -2.71
LINC01239-201ENST00000433645 CRYM-AS1A6NIL9 109 aa-1.9□□□□□ -2.71
LINC01239-201ENST00000433645 H0Y9P7 68 aa-1.9□□□□□ -2.71
LINC01239-201ENST00000433645 SVBPQ8N300 66 aa-1.9□□□□□ -2.71
LINC01239-201ENST00000433645 VAMP8Q9BV40 100 aa-1.9□□□□□ -2.71
LINC01239-201ENST00000433645 ROCK2O75116 1388 aaKnown RBP-1.9□□□□□ -2.71
LINC01239-201ENST00000433645 CLIP1P30622 1438 aa-1.91□□□□□ -2.71
LINC01239-201ENST00000433645 SPHKAPQ2M3C7 1700 aa-1.91□□□□□ -2.71
LINC01239-201ENST00000433645 KNDC1Q76NI1 1749 aa-1.91□□□□□ -2.71
LINC01239-201ENST00000433645 SNAPC5O75971 98 aa-1.91□□□□□ -2.72
LINC01239-201ENST00000433645 HMGN1P05114 100 aa-1.91□□□□□ -2.72
LINC01239-201ENST00000433645 KRTDAPP60985 99 aa-1.91□□□□□ -2.72
LINC01239-201ENST00000433645 TOPAZ1Q8N9V7 1692 aa-1.91□□□□□ -2.72
LINC01239-201ENST00000433645 TROQ12816 1431 aaPredicted RBP-1.91□□□□□ -2.72
LINC01239-201ENST00000433645 TRAV30A0A087WSZ9 112 aa-1.92□□□□□ -2.72
LINC01239-201ENST00000433645 C7orf77A4D0Y5 90 aa-1.92□□□□□ -2.72
LINC01239-201ENST00000433645 HIGD1BQ9P298 99 aa-1.92□□□□□ -2.72
LINC01239-201ENST00000433645 BCORQ6W2J9 1755 aa-1.93□□□□□ -2.72
LINC01239-201ENST00000433645 TMEM262E9PQX1 116 aa-1.93□□□□□ -2.72
LINC01239-201ENST00000433645 HEPN1Q6WQI6 88 aa-1.93□□□□□ -2.72
LINC01239-201ENST00000433645 RGPD2P0DJD1 1756 aa-1.93□□□□□ -2.72
LINC01239-201ENST00000433645 ARMS2P0C7Q2 107 aa-1.94□□□□□ -2.72
LINC01239-201ENST00000433645 GNG4P50150 75 aa-1.94□□□□□ -2.72
LINC01239-201ENST00000433645 LAMA2P24043 3122 aaKnown RBP-1.95□□□□□ -2.72
LINC01239-201ENST00000433645 LELP1Q5T871 98 aa-1.95□□□□□ -2.72
LINC01239-201ENST00000433645 WFDC13Q8IUB5 93 aa-1.95□□□□□ -2.72
LINC01239-201ENST00000433645 FAM107BQ9H098 131 aa-1.95□□□□□ -2.72
LINC01239-201ENST00000433645 CC2D2AQ9P2K1 1620 aa-1.95□□□□□ -2.72
LINC01239-201ENST00000433645 CUX1P39880 1505 aa-1.96□□□□□ -2.72
LINC01239-201ENST00000433645 MON2Q7Z3U7 1717 aa-1.96□□□□□ -2.72
LINC01239-201ENST00000433645 SPTY2D1-AS1A0A0U1RR47 76 aa-1.96□□□□□ -2.72
LINC01239-201ENST00000433645 GNGT1P63211 74 aa-1.96□□□□□ -2.72
LINC01239-201ENST00000433645 DEFB107AQ8IZN7 70 aa-1.96□□□□□ -2.72
LINC01239-201ENST00000433645 PPP3R1P63098 170 aa-1.97□□□□□ -2.72
LINC01239-201ENST00000433645 HSD52Q0P140 79 aa-1.97□□□□□ -2.72
LINC01239-201ENST00000433645 KIF20BQ96Q89 1820 aa-1.97□□□□□ -2.72
LINC01239-201ENST00000433645 VPS13BQ7Z7G8 4022 aa-1.97□□□□□ -2.73
LINC01239-201ENST00000433645 EIF4G3O43432 1585 aaKnown RBP-1.98□□□□□ -2.73
LINC01239-201ENST00000433645 KALRNO60229 2985 aa-1.98□□□□□ -2.73
LINC01239-201ENST00000433645 ABCA3Q99758 1704 aa-1.98□□□□□ -2.73
LINC01239-201ENST00000433645 C5P01031 1676 aa-1.99□□□□□ -2.73
LINC01239-201ENST00000433645 RPL13AP3Q6NVV1 102 aa-1.99□□□□□ -2.73
LINC01239-201ENST00000433645 ANK3Q12955 4377 aaKnown RBP-1.99□□□□□ -2.73
LINC01239-201ENST00000433645 ACACAQ13085 2346 aa-2□□□□□ -2.73
LINC01239-201ENST00000433645 SAMD9Q5K651 1589 aa-2□□□□□ -2.73
LINC01239-201ENST00000433645 TRBV25-1A0A075B6N4 114 aa-2□□□□□ -2.73
LINC01239-201ENST00000433645 TRBV7-7A0A0K0K1E9 115 aa-2□□□□□ -2.73
LINC01239-201ENST00000433645 CORTO00230 105 aa-2□□□□□ -2.73
LINC01239-201ENST00000433645 PSMG4Q5JS54 123 aa-2□□□□□ -2.73
LINC01239-201ENST00000433645 DNAH11Q96DT5 4516 aa-2□□□□□ -2.73
LINC01239-201ENST00000433645 NDUFC1O43677 76 aa-2.01□□□□□ -2.73
LINC01239-201ENST00000433645 PMCHL1Q16048 86 aa-2.01□□□□□ -2.73
LINC01239-201ENST00000433645 APOBP04114 4563 aaKnown RBP-2.01□□□□□ -2.73
LINC01239-201ENST00000433645 PZPP20742 1482 aa-2.01□□□□□ -2.73
LINC01239-201ENST00000433645 RYR2Q92736 4967 aa-2.02□□□□□ -2.73
LINC01239-201ENST00000433645 CACFD1Q9UGQ2 172 aa-2.02□□□□□ -2.73
LINC01239-201ENST00000433645 ABCC2Q92887 1545 aa-2.02□□□□□ -2.73
LINC01239-201ENST00000433645 MTORP42345 2549 aa-2.03□□□□□ -2.73
LINC01239-201ENST00000433645 hADV29S1A0JD25 119 aa-2.03□□□□□ -2.73
LINC01239-201ENST00000433645 DNAH2Q9P225 4427 aa-2.03□□□□□ -2.73
LINC01239-201ENST00000433645 MGAM2Q2M2H8 2515 aa-2.03□□□□□ -2.74
LINC01239-201ENST00000433645 H3BNG1 76 aa-2.04□□□□□ -2.74
LINC01239-201ENST00000433645 DLEU1O43261 78 aa-2.04□□□□□ -2.74
LINC01239-201ENST00000433645 QSER1Q2KHR3 1735 aa-2.04□□□□□ -2.74
LINC01239-201ENST00000433645 NBEAQ8NFP9 2946 aa-2.04□□□□□ -2.74
LINC01239-201ENST00000433645 GCN1Q92616 2671 aaKnown RBP-2.04□□□□□ -2.74
LINC01239-201ENST00000433645 MLH3Q9UHC1 1453 aa-2.05□□□□□ -2.74
LINC01239-201ENST00000433645 C9orf92A6NGG3 77 aa-2.05□□□□□ -2.74
LINC01239-201ENST00000433645 ABCC5O15440 1437 aa-2.06□□□□□ -2.74
LINC01239-201ENST00000433645 EFCAB10A6NFE3 127 aa-2.06□□□□□ -2.74
LINC01239-201ENST00000433645 MPC2O95563 127 aa-2.06□□□□□ -2.74
LINC01239-201ENST00000433645 ASIPP42127 132 aa-2.06□□□□□ -2.74
LINC01239-201ENST00000433645 PSENENQ9NZ42 101 aa-2.06□□□□□ -2.74
LINC01239-201ENST00000433645 LRRK2Q5S007 2527 aa-2.06□□□□□ -2.74
LINC01239-201ENST00000433645 PREX1Q8TCU6 1659 aa-2.06□□□□□ -2.74
LINC01239-201ENST00000433645 NMSQ5H8A3 153 aa-2.07□□□□□ -2.74
LINC01239-201ENST00000433645 FAM186AA6NE01 2351 aa-2.08□□□□□ -2.74
LINC01239-201ENST00000433645 COX6B2Q6YFQ2 88 aa-2.08□□□□□ -2.74
LINC01239-201ENST00000433645 AP4S1Q9Y587 144 aa-2.08□□□□□ -2.74
LINC01239-201ENST00000433645 NIPBLQ6KC79 2804 aaeCLIP-2.09□□□□□ -2.74
LINC01239-201ENST00000433645 H7BZZ5 65 aa-2.09□□□□□ -2.74
LINC01239-201ENST00000433645 PRDM15P57071 1507 aaPredicted RBP-2.09□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms