RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 LINC01546A6NGU7 62 aa7.49□□□□□ -1.21
CCDC144CP-202ENST00000433419 RTL8CO15255 209 aa7.49□□□□□ -1.21
CCDC144CP-202ENST00000433419 COX7CP15954 63 aa7.49□□□□□ -1.21
CCDC144CP-202ENST00000433419 A0A096LNT2 108 aa7.48□□□□□ -1.21
CCDC144CP-202ENST00000433419 HTTP42858 3142 aa7.48□□□□□ -1.21
CCDC144CP-202ENST00000433419 LINC00575Q6W349 94 aa7.48□□□□□ -1.21
CCDC144CP-202ENST00000433419 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
CCDC144CP-202ENST00000433419 K7EIL1 84 aa7.47□□□□□ -1.21
CCDC144CP-202ENST00000433419 Q6ZRP5 223 aa7.47□□□□□ -1.21
CCDC144CP-202ENST00000433419 Q6Q795 121 aa7.46□□□□□ -1.21
CCDC144CP-202ENST00000433419 LINC00167Q96N53 147 aa7.46□□□□□ -1.21
CCDC144CP-202ENST00000433419 COL27A1Q8IZC6 1860 aaPredicted RBP7.45□□□□□ -1.22
CCDC144CP-202ENST00000433419 CRYGAP11844 174 aa7.45□□□□□ -1.22
CCDC144CP-202ENST00000433419 C6orf48Q9UBA6 75 aa7.45□□□□□ -1.22
CCDC144CP-202ENST00000433419 C5orf42Q9H799 3197 aa7.45□□□□□ -1.22
CCDC144CP-202ENST00000433419 ATP5EP56381 51 aaPredicted RBP7.45□□□□□ -1.22
CCDC144CP-202ENST00000433419 DNAH10OSP0CZ25 163 aa7.44□□□□□ -1.22
CCDC144CP-202ENST00000433419 FAM30AQ9NZY2 134 aa7.44□□□□□ -1.22
CCDC144CP-202ENST00000433419 PLA2G1BP04054 148 aaKnown RBP7.44□□□□□ -1.22
CCDC144CP-202ENST00000433419 PCSK5Q92824 1860 aa7.44□□□□□ -1.22
CCDC144CP-202ENST00000433419 A0A087WVE0 104 aa7.44□□□□□ -1.22
CCDC144CP-202ENST00000433419 PRR4Q16378 134 aa7.43□□□□□ -1.22
CCDC144CP-202ENST00000433419 V9GYY9 64 aa7.43□□□□□ -1.22
CCDC144CP-202ENST00000433419 A8MTW9 85 aa7.43□□□□□ -1.22
CCDC144CP-202ENST00000433419 LINC01547P58512 204 aaPredicted RBP7.43□□□□□ -1.22
CCDC144CP-202ENST00000433419 C19orf73Q9NVV2 129 aa7.42□□□□□ -1.22
CCDC144CP-202ENST00000433419 FLNAP21333 2647 aaKnown RBP7.42□□□□□ -1.22
CCDC144CP-202ENST00000433419 IGLV5-45A0A087WSX0 123 aa7.42□□□□□ -1.22
CCDC144CP-202ENST00000433419 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
CCDC144CP-202ENST00000433419 CHD9Q3L8U1 2897 aa7.41□□□□□ -1.22
CCDC144CP-202ENST00000433419 LINC00208Q96KT6 92 aa7.41□□□□□ -1.22
CCDC144CP-202ENST00000433419 GVQW2A0A096LPI5 108 aaPredicted RBP7.4□□□□□ -1.22
CCDC144CP-202ENST00000433419 SPACA4Q8TDM5 124 aa7.4□□□□□ -1.22
CCDC144CP-202ENST00000433419 Q9UF83 564 aa7.4□□□□□ -1.22
CCDC144CP-202ENST00000433419 TRAV7A0A075B6U4 112 aa7.4□□□□□ -1.23
CCDC144CP-202ENST00000433419 MOBPQ13875 183 aa7.4□□□□□ -1.23
CCDC144CP-202ENST00000433419 ITPR3Q14573 2671 aa7.39□□□□□ -1.23
CCDC144CP-202ENST00000433419 CFAP46Q8IYW2 2715 aa7.39□□□□□ -1.23
CCDC144CP-202ENST00000433419 KRTAP10-11P60412 298 aa7.39□□□□□ -1.23
CCDC144CP-202ENST00000433419 J3QL48 77 aa7.39□□□□□ -1.23
CCDC144CP-202ENST00000433419 TRBV7-6A0A0J9YX20 115 aa7.38□□□□□ -1.23
CCDC144CP-202ENST00000433419 PHF5AQ7RTV0 110 aaKnown RBP7.38□□□□□ -1.23
CCDC144CP-202ENST00000433419 LAMA3Q16787 3333 aa7.38□□□□□ -1.23
CCDC144CP-202ENST00000433419 Q8N3U1 123 aa7.38□□□□□ -1.23
CCDC144CP-202ENST00000433419 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
CCDC144CP-202ENST00000433419 MKI67P46013 3256 aaKnown RBP7.37□□□□□ -1.23
CCDC144CP-202ENST00000433419 CSNK1G2-AS1Q8NCQ2 148 aa7.37□□□□□ -1.23
CCDC144CP-202ENST00000433419 KIAA0087Q14695 138 aa7.37□□□□□ -1.23
CCDC144CP-202ENST00000433419 SETXQ7Z333 2677 aaKnown RBP7.37□□□□□ -1.23
CCDC144CP-202ENST00000433419 A6NED7 52 aa7.37□□□□□ -1.23
CCDC144CP-202ENST00000433419 LINC00846Q9NV44 126 aa7.37□□□□□ -1.23
CCDC144CP-202ENST00000433419 KRTAP1-3Q8IUG1 177 aa7.35□□□□□ -1.23
CCDC144CP-202ENST00000433419 Q8NBF4 154 aa7.35□□□□□ -1.23
CCDC144CP-202ENST00000433419 DEFB116Q30KQ4 102 aa7.35□□□□□ -1.23
CCDC144CP-202ENST00000433419 RETNLBQ9BQ08 111 aa7.35□□□□□ -1.23
CCDC144CP-202ENST00000433419 A0A1B0GW54 56 aa7.34□□□□□ -1.23
CCDC144CP-202ENST00000433419 TM2D3Q9BRN9 247 aa7.34□□□□□ -1.23
CCDC144CP-202ENST00000433419 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
CCDC144CP-202ENST00000433419 Q6ZRX8 168 aa7.34□□□□□ -1.23
CCDC144CP-202ENST00000433419 BCE1O60756 84 aa7.34□□□□□ -1.23
CCDC144CP-202ENST00000433419 EPM2AB3EWF7 344 aa7.34□□□□□ -1.24
CCDC144CP-202ENST00000433419 HCG22E2RYF7 251 aa7.33□□□□□ -1.24
CCDC144CP-202ENST00000433419 KRTAP10-3P60369 221 aa7.33□□□□□ -1.24
CCDC144CP-202ENST00000433419 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
CCDC144CP-202ENST00000433419 LINC00336Q6ZUF6 198 aa7.33□□□□□ -1.24
CCDC144CP-202ENST00000433419 STAB1Q9NY15 2570 aa7.32□□□□□ -1.24
CCDC144CP-202ENST00000433419 ELOF1P60002 83 aaKnown RBP7.32□□□□□ -1.24
CCDC144CP-202ENST00000433419 BRCA2P51587 3418 aa7.32□□□□□ -1.24
CCDC144CP-202ENST00000433419 KRTAP1-1Q07627 177 aa7.32□□□□□ -1.24
CCDC144CP-202ENST00000433419 CHTF8P0CG12 524 aa7.32□□□□□ -1.24
CCDC144CP-202ENST00000433419 CDIP1Q9H305 208 aa7.31□□□□□ -1.24
CCDC144CP-202ENST00000433419 CENPEQ02224 2701 aa7.31□□□□□ -1.24
CCDC144CP-202ENST00000433419 H0Y9P7 68 aa7.31□□□□□ -1.24
CCDC144CP-202ENST00000433419 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
CCDC144CP-202ENST00000433419 IGKV2D-30A0A075B6S6 120 aa7.29□□□□□ -1.24
CCDC144CP-202ENST00000433419 IGKV2-30P06310 120 aa7.29□□□□□ -1.24
CCDC144CP-202ENST00000433419 SMIM26A0A096LP01 95 aa7.29□□□□□ -1.24
CCDC144CP-202ENST00000433419 PCOTHQ58A44 107 aa7.29□□□□□ -1.24
CCDC144CP-202ENST00000433419 FAM218AQ96MZ4 157 aa7.29□□□□□ -1.24
CCDC144CP-202ENST00000433419 BPTFQ12830 3046 aa7.28□□□□□ -1.24
CCDC144CP-202ENST00000433419 hDV103S1A0JD37 113 aa7.28□□□□□ -1.24
CCDC144CP-202ENST00000433419 CXCL6P80162 114 aa7.28□□□□□ -1.24
CCDC144CP-202ENST00000433419 TP53AIP1Q9HCN2 124 aa7.28□□□□□ -1.24
CCDC144CP-202ENST00000433419 TRBV7-7A0A0K0K1E9 115 aa7.27□□□□□ -1.24
CCDC144CP-202ENST00000433419 SPINK1P00995 79 aa7.27□□□□□ -1.24
CCDC144CP-202ENST00000433419 PRO0461Q9UI25 63 aa7.27□□□□□ -1.25
CCDC144CP-202ENST00000433419 A0A087WTM6 91 aa7.26□□□□□ -1.25
CCDC144CP-202ENST00000433419 LINC00612Q8N6U2 182 aa7.26□□□□□ -1.25
CCDC144CP-202ENST00000433419 LINC00476Q8WZB0 136 aa7.26□□□□□ -1.25
CCDC144CP-202ENST00000433419 PRR34Q9NV39 138 aa7.26□□□□□ -1.25
CCDC144CP-202ENST00000433419 GIG44P09565 113 aaPredicted RBP7.26□□□□□ -1.25
CCDC144CP-202ENST00000433419 TMEM254Q8TBM7 123 aa7.26□□□□□ -1.25
CCDC144CP-202ENST00000433419 TRANK1O15050 2925 aa7.25□□□□□ -1.25
CCDC144CP-202ENST00000433419 VPREB1P12018 145 aa7.25□□□□□ -1.25
CCDC144CP-202ENST00000433419 TEP1Q99973 2627 aaKnown RBP7.25□□□□□ -1.25
CCDC144CP-202ENST00000433419 LINC00313P59037 77 aa7.24□□□□□ -1.25
CCDC144CP-202ENST00000433419 C9orf163Q8N9P6 203 aa7.24□□□□□ -1.25
CCDC144CP-202ENST00000433419 ATP11AUNQ6ZP68 121 aa7.23□□□□□ -1.25
CCDC144CP-202ENST00000433419 C1orf64Q8NEQ6 169 aa7.23□□□□□ -1.25
CCDC144CP-202ENST00000433419 A0A0C4DFX4 3053 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms