RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 HIGD2BQ4VC39 106 aa10.79□□□□□ -0.68
C9orf3-206ENST00000428313 SMIM29Q86T20 159 aa10.79□□□□□ -0.68
C9orf3-206ENST00000428313 FAM30AQ9NZY2 134 aa10.79□□□□□ -0.68
C9orf3-206ENST00000428313 LINC01356Q8N9X3 169 aa10.78□□□□□ -0.68
C9orf3-206ENST00000428313 PSCAO43653 123 aa10.77□□□□□ -0.69
C9orf3-206ENST00000428313 UBE2BP63146 152 aa10.77□□□□□ -0.69
C9orf3-206ENST00000428313 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
C9orf3-206ENST00000428313 NCOR2Q9Y618 2525 aa10.77□□□□□ -0.69
C9orf3-206ENST00000428313 EPG5Q9HCE0 2579 aa10.76□□□□□ -0.69
C9orf3-206ENST00000428313 SYCNQ0VAF6 134 aa10.76□□□□□ -0.69
C9orf3-206ENST00000428313 C10orf25Q5T742 122 aa10.75□□□□□ -0.69
C9orf3-206ENST00000428313 UNQ6190/PRO20217Q6UXQ8 127 aa10.75□□□□□ -0.69
C9orf3-206ENST00000428313 A0A1B0GW54 56 aa10.75□□□□□ -0.69
C9orf3-206ENST00000428313 GYPEP15421 78 aa10.74□□□□□ -0.69
C9orf3-206ENST00000428313 CMC4P56277 68 aaPredicted RBP10.74□□□□□ -0.69
C9orf3-206ENST00000428313 SPAG11BQ08648 103 aa10.74□□□□□ -0.69
C9orf3-206ENST00000428313 KTN1-AS1Q86SY8 53 aa10.74□□□□□ -0.69
C9orf3-206ENST00000428313 CSNK1G2-AS1Q8NCQ2 148 aa10.74□□□□□ -0.69
C9orf3-206ENST00000428313 GVQW2A0A096LPI5 108 aaPredicted RBP10.73□□□□□ -0.69
C9orf3-206ENST00000428313 WNK1Q9H4A3 2382 aa10.73□□□□□ -0.69
C9orf3-206ENST00000428313 HIVEP3Q5T1R4 2406 aa10.73□□□□□ -0.69
C9orf3-206ENST00000428313 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
C9orf3-206ENST00000428313 Q6YL49 198 aa10.73□□□□□ -0.69
C9orf3-206ENST00000428313 KLK12Q9UKR0 248 aa10.73□□□□□ -0.69
C9orf3-206ENST00000428313 A8MUN3 132 aa10.72□□□□□ -0.69
C9orf3-206ENST00000428313 FSHBP01225 129 aa10.72□□□□□ -0.69
C9orf3-206ENST00000428313 REG3AQ06141 175 aa10.72□□□□□ -0.69
C9orf3-206ENST00000428313 LINC00588Q9Y4M8 146 aa10.72□□□□□ -0.69
C9orf3-206ENST00000428313 NOTCH3Q9UM47 2321 aa10.71□□□□□ -0.69
C9orf3-206ENST00000428313 Q5VV11 94 aa10.71□□□□□ -0.69
C9orf3-206ENST00000428313 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
C9orf3-206ENST00000428313 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
C9orf3-206ENST00000428313 C3orf84H3BNL1 204 aa10.7□□□□□ -0.7
C9orf3-206ENST00000428313 UBE2AP49459 152 aa10.7□□□□□ -0.7
C9orf3-206ENST00000428313 IGLV10-54A0A075B6I4 117 aa10.7□□□□□ -0.7
C9orf3-206ENST00000428313 NDUFB1O75438 58 aa10.7□□□□□ -0.7
C9orf3-206ENST00000428313 CSPG4Q6UVK1 2322 aa10.69□□□□□ -0.7
C9orf3-206ENST00000428313 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.69□□□□□ -0.7
C9orf3-206ENST00000428313 ANGP03950 147 aaKnown RBP10.67□□□□□ -0.7
C9orf3-206ENST00000428313 RBM12B-AS1Q9P1G2 102 aa10.67□□□□□ -0.7
C9orf3-206ENST00000428313 MAP1AP78559 2803 aaPredicted RBP10.67□□□□□ -0.7
C9orf3-206ENST00000428313 NBASA2RRP1 2371 aa10.67□□□□□ -0.7
C9orf3-206ENST00000428313 ACACBO00763 2458 aa10.67□□□□□ -0.7
C9orf3-206ENST00000428313 CR1P17927 2039 aa10.66□□□□□ -0.7
C9orf3-206ENST00000428313 KMT2BQ9UMN6 2715 aaPredicted RBP10.66□□□□□ -0.7
C9orf3-206ENST00000428313 IGLV5-48A0A075B6I7 105 aa10.65□□□□□ -0.7
C9orf3-206ENST00000428313 CHD8Q9HCK8 2581 aa10.65□□□□□ -0.7
C9orf3-206ENST00000428313 COL12A1Q99715 3063 aa10.65□□□□□ -0.7
C9orf3-206ENST00000428313 LIMD2Q9BT23 127 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 PRO0255Q9UI72 69 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 M0R378 163 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 NDUFS5O43920 106 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 DEFB130BP0DP73 79 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 DEFB130AP0DP74 79 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 VPREB1P12018 145 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 CRYBG3Q68DQ2 2970 aa10.64□□□□□ -0.71
C9orf3-206ENST00000428313 IGF2RP11717 2491 aa10.63□□□□□ -0.71
C9orf3-206ENST00000428313 A8MU10 97 aa10.63□□□□□ -0.71
C9orf3-206ENST00000428313 KPRPQ5T749 579 aaPredicted RBP10.63□□□□□ -0.71
C9orf3-206ENST00000428313 XAGE1AQ9HD64 81 aa10.63□□□□□ -0.71
C9orf3-206ENST00000428313 C6orf48Q9UBA6 75 aa10.63□□□□□ -0.71
C9orf3-206ENST00000428313 C16orf90A8MZG2 172 aa10.61□□□□□ -0.71
C9orf3-206ENST00000428313 CHD6Q8TD26 2715 aa10.61□□□□□ -0.71
C9orf3-206ENST00000428313 ATP11AUNQ6ZP68 121 aa10.61□□□□□ -0.71
C9orf3-206ENST00000428313 VPS13CQ709C8 3753 aa10.6□□□□□ -0.71
C9orf3-206ENST00000428313 A0A096LPF7 62 aa10.6□□□□□ -0.71
C9orf3-206ENST00000428313 CHKB-CPT1BH3BT56 60 aa10.6□□□□□ -0.71
C9orf3-206ENST00000428313 PRR4Q16378 134 aa10.6□□□□□ -0.71
C9orf3-206ENST00000428313 B9D2Q9BPU9 175 aa10.6□□□□□ -0.71
C9orf3-206ENST00000428313 ST20-AS1Q8NBB2 130 aa10.59□□□□□ -0.71
C9orf3-206ENST00000428313 ATRXP46100 2492 aa10.59□□□□□ -0.71
C9orf3-206ENST00000428313 Q8N9P0 234 aaPredicted RBP10.59□□□□□ -0.71
C9orf3-206ENST00000428313 C19orf73Q9NVV2 129 aa10.59□□□□□ -0.71
C9orf3-206ENST00000428313 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
C9orf3-206ENST00000428313 DSCR10P59022 87 aa10.58□□□□□ -0.72
C9orf3-206ENST00000428313 PHF5AQ7RTV0 110 aaKnown RBP10.58□□□□□ -0.72
C9orf3-206ENST00000428313 USP24Q9UPU5 2620 aa10.57□□□□□ -0.72
C9orf3-206ENST00000428313 SPANXA2-OT1Q8N9U9 137 aa10.57□□□□□ -0.72
C9orf3-206ENST00000428313 A0A1W2PNM2 257 aa10.56□□□□□ -0.72
C9orf3-206ENST00000428313 Q9BRP9 147 aa10.56□□□□□ -0.72
C9orf3-206ENST00000428313 Q8N377 158 aa10.56□□□□□ -0.72
C9orf3-206ENST00000428313 HCG22E2RYF7 251 aa10.55□□□□□ -0.72
C9orf3-206ENST00000428313 KCNQ1DNQ9H478 68 aa10.55□□□□□ -0.72
C9orf3-206ENST00000428313 Q75L30 129 aa10.54□□□□□ -0.72
C9orf3-206ENST00000428313 Q8NBF4 154 aa10.54□□□□□ -0.72
C9orf3-206ENST00000428313 A6NN06 94 aa10.54□□□□□ -0.72
C9orf3-206ENST00000428313 K7EQZ3 153 aa10.54□□□□□ -0.72
C9orf3-206ENST00000428313 MP68P56378 58 aa10.54□□□□□ -0.72
C9orf3-206ENST00000428313 SPRR4Q96PI1 79 aa10.54□□□□□ -0.72
C9orf3-206ENST00000428313 LINC00208Q96KT6 92 aa10.53□□□□□ -0.72
C9orf3-206ENST00000428313 PRR34Q9NV39 138 aa10.53□□□□□ -0.72
C9orf3-206ENST00000428313 PRR15LQ9BU68 103 aa10.52□□□□□ -0.73
C9orf3-206ENST00000428313 TNP2Q05952 138 aa10.51□□□□□ -0.73
C9orf3-206ENST00000428313 EGFEM1PQ0D2K5 195 aa10.51□□□□□ -0.73
C9orf3-206ENST00000428313 SPTSSBQ8NFR3 76 aa10.51□□□□□ -0.73
C9orf3-206ENST00000428313 BAHCC1Q9P281 2608 aa10.5□□□□□ -0.73
C9orf3-206ENST00000428313 C1orf137Q5JT78 98 aa10.5□□□□□ -0.73
C9orf3-206ENST00000428313 LCA10Q71F78 164 aa10.5□□□□□ -0.73
C9orf3-206ENST00000428313 NBPF19A0A087WUL8 3843 aa10.5□□□□□ -0.73
C9orf3-206ENST00000428313 LOC101927531A0A1B0GV80 90 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms