RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 CCL22O00626 93 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 NKTRP30414 1462 aaKnown RBP-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 SARNPP82979 210 aaKnown RBP-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 ANKRD11Q6UB99 2663 aaPredicted RBP-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 HEPN1Q6WQI6 88 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 NEBP20929 6669 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 FAT3Q8TDW7 4589 aa-0.51□□□□□ -2.49
LINC00397-201ENST00000422074 PKHD1L1Q86WI1 4243 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 RGPD2P0DJD1 1756 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 LRRC37AA6NMS7 1700 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 SPHKAPQ2M3C7 1700 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 PZPP20742 1482 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MRC2Q9UBG0 1479 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 EDC4Q6P2E9 1401 aaKnown RBP-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 H3BQF6 201 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MRPS10P82664 201 aaKnown RBP-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 C6orf201Q7Z4U5 140 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 TMEM203Q969S6 136 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MTORP42345 2549 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 CCDC168Q8NDH2 2452 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 FAM186AA6NE01 2351 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 MUC17Q685J3 4493 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 KIAA1551Q9HCM1 1747 aa-0.52□□□□□ -2.49
LINC00397-201ENST00000422074 TOPAZ1Q8N9V7 1692 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 PKD1L2Q7Z442 2459 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 LYSTQ99698 3801 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 SLIT1O75093 1534 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 A0A087WVE0 104 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 C7orf77A4D0Y5 90 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 H3BNG1 76 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 H3BQ15 152 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 GNGT1P63211 74 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 GTF2H5Q6ZYL4 71 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CGREF1Q99674 301 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 MRPL34Q9BQ48 92 aaKnown RBP-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CDKN2A-AS1Q9UH64 79 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 LAMA1P25391 3075 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 KIF20BQ96Q89 1820 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 DMXL1Q9Y485 3027 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CUBNO60494 3623 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 COL4A6Q14031 1691 aa-0.53□□□□□ -2.49
LINC00397-201ENST00000422074 CHD1O14646 1710 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 A0A0G2JND7 137 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 SPTY2D1-AS1A0A0U1RR47 76 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 TMEM262E9PQX1 116 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 ARMS2P0C7Q2 107 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 LELP1Q5T871 98 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 SPRR2FQ96RM1 72 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 HIGD1BQ9P298 99 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 CEP290O15078 2479 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 PTPN23Q9H3S7 1636 aa-0.54□□□□□ -2.5
LINC00397-201ENST00000422074 MGAM2Q2M2H8 2515 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 CLIP1P30622 1438 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 BCORQ6W2J9 1755 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 UTP20O75691 2785 aaKnown RBP-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 KNDC1Q76NI1 1749 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 KALRNO60229 2985 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 H0Y9P7 68 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 DEFB107AQ8IZN7 70 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 PSENENQ9NZ42 101 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 EPPK1P58107 5090 aaKnown RBP-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 ADAMTS12P58397 1594 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 A0A0C4DFX4 3053 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 RYR1P21817 5038 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 NBEAQ8NFP9 2946 aa-0.55□□□□□ -2.5
LINC00397-201ENST00000422074 NIPBLQ6KC79 2804 aaeCLIP-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 TRBV7-7A0A0K0K1E9 115 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 HSD52Q0P140 79 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 PMCHL1Q16048 86 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 PSMG4Q5JS54 123 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 WFDC13Q8IUB5 93 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 FAM135AQ9P2D6 1515 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 MON2Q7Z3U7 1717 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 GCN1Q92616 2671 aaKnown RBP-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 SHPRHQ149N8 1683 aa-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 TARBP1Q13395 1621 aaKnown RBP-0.56□□□□□ -2.5
LINC00397-201ENST00000422074 RIF1Q5UIP0 2472 aaKnown RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 LAMA2P24043 3122 aaKnown RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 ABCA3Q99758 1704 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 HYDINQ4G0P3 5121 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 NDUFC1O43677 76 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 MT1AP04731 61 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 NMSQ5H8A3 153 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 C2orf88Q9BSF0 95 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 AP4S1Q9Y587 144 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 UBR3Q6ZT12 1888 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 TROQ12816 1431 aaPredicted RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 NCOA3Q9Y6Q9 1424 aa-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 CICQ96RK0 1608 aaPredicted RBP-0.57□□□□□ -2.5
LINC00397-201ENST00000422074 DNAH11Q96DT5 4516 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 VPS13BQ7Z7G8 4022 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 TRBV25-1A0A075B6N4 114 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 CACFD1Q9UGQ2 172 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 ABCC5O15440 1437 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 TEX15Q9BXT5 2789 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 C4AP0C0L4 1744 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 C4BP0C0L5 1744 aa-0.58□□□□□ -2.5
LINC00397-201ENST00000422074 C5P01031 1676 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 SCN11AQ9UI33 1791 aa-0.59□□□□□ -2.5
LINC00397-201ENST00000422074 hADV29S1A0JD25 119 aa-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 187.2 ms