RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 UBE2BP63146 152 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 MRPS36P82909 103 aaKnown RBP2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 PMCHL1Q16048 86 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 PRR4Q16378 134 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 C6orf226Q5I0X4 101 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 Q8NDZ9 215 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 TMEM141Q96I45 108 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 RETNLBQ9BQ08 111 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 VCX2Q9H322 139 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 MAP1LC3AQ9H492 121 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 SPANXA1Q9NS26 97 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 LINC00474Q9P2X8 69 aa2.02□□□□□ -2.09
SEMA3A-202ENST00000420047 TGIF2-C20orf24A0A0A6YYL0 155 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 A0A0U1RRA0 63 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 F8W036 122 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 PPP1R17O96001 155 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 TLX1NBP0CAT3 122 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 NDUFV3P56181 108 aaKnown RBP2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 KRTAP13-2Q52LG2 175 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 TEX43Q6ZNM6 134 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 OR10D4PQ8NGN7 298 aa2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 ZNF625Q96I27 306 aaPredicted RBP2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 PACRGQ96M98 296 aaPredicted RBP2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 ALKBH7Q9BT30 221 aaPredicted RBP2.01□□□□□ -2.09
SEMA3A-202ENST00000420047 RNF213Q63HN8 5207 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 A0A096LNJ9 63 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 A0A1B0GW15 77 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 TMEM238C9JI98 176 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 NDUFC2-KCTD14E9PQ53 114 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 PPBPP02775 128 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 PFN2P35080 140 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 NDUFA6P56556 154 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 CKS1BP61024 79 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 Q6ZN92 141 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 DIRC1Q969H9 104 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 TOMM6Q96B49 74 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 SCGB3A1Q96QR1 104 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 CST9LQ9H4G1 147 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 CYSLTR1Q9Y271 337 aa2□□□□□ -2.09
SEMA3A-202ENST00000420047 IGKV2-28A0A075B6P5 120 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 TRBV30A0A0K0K1B3 111 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 TMEM218A2RU14 115 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 ZNF861PO60384 105 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 IGKV2D-28P01615 120 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 MT-ND4LP03901 98 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 S100A8P05109 93 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 PRLHP81277 87 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 FABP9Q0Z7S8 132 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 CLLU1Q5K131 121 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 Q6ZVQ6 151 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 ATP5L2Q7Z4Y8 100 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 C3orf22Q8N5N4 141 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 COX7B2Q8TF08 81 aa1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 GEMIN7Q9H840 131 aaKnown RBP1.99□□□□□ -2.09
SEMA3A-202ENST00000420047 RAB14P61106 215 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 SMAGPQ0VAQ4 97 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 Q1RN00 199 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 ORMDL2Q53FV1 153 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 ERASQ7Z444 233 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 FAM19A3Q7Z5A8 133 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 MRPL55Q7Z7F7 128 aaKnown RBP1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 COMMD7Q86VX2 200 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 Q8IZM0 81 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 C2orf88Q9BSF0 95 aa1.98□□□□□ -2.09
SEMA3A-202ENST00000420047 TINCRA0A1B0GVN0 87 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 C11orf86A6NJI1 115 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 F8VRH5 84 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 F8WDY8 70 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 NUPR1O60356 82 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 BCE1O60756 84 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 ZNF22P17026 224 aaPredicted RBP1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 HERVK_113P63121 156 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 PMVKQ15126 192 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 PDZD11Q5EBL8 140 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 FAM19A1Q7Z5A9 133 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 BAGE3Q86Y29 109 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 KRTAP13-1Q8IUC0 172 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 LINC01561Q8N1V8 128 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 FAM19A2Q8N3H0 131 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 DAND5Q8N907 189 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 C18orf32Q8TCD1 76 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 TIMM17AQ99595 171 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 KRTAP4-1Q9BYQ7 146 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 PPDPFQ9H3Y8 114 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 SND1-IT1Q9HBX3 110 aa1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 NXT2Q9NPJ8 142 aaKnown RBP1.97□□□□□ -2.09
SEMA3A-202ENST00000420047 IGLV1-50A0A075B6I6 118 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 LINC01546A6NGU7 62 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 M0R378 163 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 LINC00614P0C842 121 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 IGLC3P0DOY3 106 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 UBE2AP49459 152 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 TMEM170BQ5T4T1 132 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 FA2HQ7L5A8 372 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 SEC11CQ9BY50 192 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 GNB1LQ9BYB4 327 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 PKIGQ9Y2B9 76 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 LAMTOR2Q9Y2Q5 125 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 TRAPPC1Q9Y5R8 145 aa1.96□□□□□ -2.1
SEMA3A-202ENST00000420047 H0Y8G0 127 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms