RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 KRTAP10-3P60369 221 aa10.37□□□□□ -0.75
SEMA3B-203ENST00000419007 DAD1P61803 113 aa10.37□□□□□ -0.75
SEMA3B-203ENST00000419007 C10orf25Q5T742 122 aa10.37□□□□□ -0.75
SEMA3B-203ENST00000419007 SPATA3Q8NHX4 192 aa10.36□□□□□ -0.75
SEMA3B-203ENST00000419007 TRAV23DV6A0A075B6W5 121 aa10.36□□□□□ -0.75
SEMA3B-203ENST00000419007 NDUFC2O95298 119 aa10.36□□□□□ -0.75
SEMA3B-203ENST00000419007 COX17Q14061 63 aa10.36□□□□□ -0.75
SEMA3B-203ENST00000419007 LAMTOR3Q9UHA4 124 aa10.36□□□□□ -0.75
SEMA3B-203ENST00000419007 CRYGAP11844 174 aa10.35□□□□□ -0.75
SEMA3B-203ENST00000419007 SPAG11BQ08648 103 aa10.35□□□□□ -0.75
SEMA3B-203ENST00000419007 SERP2Q8N6R1 65 aa10.35□□□□□ -0.75
SEMA3B-203ENST00000419007 ENHOQ6UWT2 76 aa10.35□□□□□ -0.75
SEMA3B-203ENST00000419007 SMIM9A6NGZ8 99 aa10.34□□□□□ -0.75
SEMA3B-203ENST00000419007 FAM19A1Q7Z5A9 133 aa10.34□□□□□ -0.75
SEMA3B-203ENST00000419007 TENM1Q9UKZ4 2725 aa10.34□□□□□ -0.75
SEMA3B-203ENST00000419007 IGHV4-28A0A0C4DH34 117 aa10.34□□□□□ -0.75
SEMA3B-203ENST00000419007 LYRM9A8MSI8 78 aa10.33□□□□□ -0.76
SEMA3B-203ENST00000419007 LINC00167Q96N53 147 aa10.33□□□□□ -0.76
SEMA3B-203ENST00000419007 KLK12Q9UKR0 248 aa10.33□□□□□ -0.76
SEMA3B-203ENST00000419007 UBL5Q9BZL1 73 aa10.33□□□□□ -0.76
SEMA3B-203ENST00000419007 CELA1Q9UNI1 258 aa10.32□□□□□ -0.76
SEMA3B-203ENST00000419007 LINC00575Q6W349 94 aa10.31□□□□□ -0.76
SEMA3B-203ENST00000419007 RBM3P98179 157 aaKnown RBP10.31□□□□□ -0.76
SEMA3B-203ENST00000419007 XAGE1AQ9HD64 81 aa10.31□□□□□ -0.76
SEMA3B-203ENST00000419007 GHRHP01286 108 aa10.3□□□□□ -0.76
SEMA3B-203ENST00000419007 J3KT08 172 aa10.29□□□□□ -0.76
SEMA3B-203ENST00000419007 Q6ZQY7 126 aa10.29□□□□□ -0.76
SEMA3B-203ENST00000419007 HAMPP81172 84 aa10.28□□□□□ -0.76
SEMA3B-203ENST00000419007 UPK3BQ9BT76 320 aa10.27□□□□□ -0.76
SEMA3B-203ENST00000419007 COL6A5A8TX70 2615 aa10.27□□□□□ -0.77
SEMA3B-203ENST00000419007 M0R2N4 97 aa10.27□□□□□ -0.77
SEMA3B-203ENST00000419007 STAB1Q9NY15 2570 aa10.26□□□□□ -0.77
SEMA3B-203ENST00000419007 APOC4P55056 127 aa10.26□□□□□ -0.77
SEMA3B-203ENST00000419007 C9orf66Q5T8R8 295 aa10.26□□□□□ -0.77
SEMA3B-203ENST00000419007 F8WDY8 70 aa10.25□□□□□ -0.77
SEMA3B-203ENST00000419007 DSCR8Q96T75 97 aa10.25□□□□□ -0.77
SEMA3B-203ENST00000419007 ZNF561-AS1K7EIQ3 104 aa10.25□□□□□ -0.77
SEMA3B-203ENST00000419007 ATP5EP2Q5VTU8 51 aa10.25□□□□□ -0.77
SEMA3B-203ENST00000419007 TRBV10-3A0A0K0K1G6 114 aa10.25□□□□□ -0.77
SEMA3B-203ENST00000419007 Q6ZQT0 140 aa10.24□□□□□ -0.77
SEMA3B-203ENST00000419007 FAM19A5Q7Z5A7 132 aaPredicted RBP10.24□□□□□ -0.77
SEMA3B-203ENST00000419007 SPART-AS1P0CW21 52 aa10.24□□□□□ -0.77
SEMA3B-203ENST00000419007 LELP1Q5T871 98 aa10.24□□□□□ -0.77
SEMA3B-203ENST00000419007 HIGD2BQ4VC39 106 aa10.23□□□□□ -0.77
SEMA3B-203ENST00000419007 C20orf197Q8N268 126 aa10.22□□□□□ -0.77
SEMA3B-203ENST00000419007 TMEM258P61165 79 aa10.22□□□□□ -0.77
SEMA3B-203ENST00000419007 Q8NAQ8 132 aa10.22□□□□□ -0.77
SEMA3B-203ENST00000419007 IGLV6-57P01721 117 aa10.21□□□□□ -0.77
SEMA3B-203ENST00000419007 C6orf48Q9UBA6 75 aa10.21□□□□□ -0.77
SEMA3B-203ENST00000419007 A0A0J9YWU9 116 aa10.21□□□□□ -0.78
SEMA3B-203ENST00000419007 IGHV4-30-4P0DP06 118 aa10.21□□□□□ -0.78
SEMA3B-203ENST00000419007 DIRC1Q969H9 104 aa10.21□□□□□ -0.78
SEMA3B-203ENST00000419007 SEC61GP60059 68 aa10.2□□□□□ -0.78
SEMA3B-203ENST00000419007 DPH3Q96FX2 82 aa10.2□□□□□ -0.78
SEMA3B-203ENST00000419007 TRRAPQ9Y4A5 3859 aa10.19□□□□□ -0.78
SEMA3B-203ENST00000419007 MIFP14174 115 aa10.19□□□□□ -0.78
SEMA3B-203ENST00000419007 PKD1L1Q8TDX9 2849 aa10.19□□□□□ -0.78
SEMA3B-203ENST00000419007 Q6ZVQ6 151 aa10.19□□□□□ -0.78
SEMA3B-203ENST00000419007 SCXQ7RTU7 201 aa10.19□□□□□ -0.78
SEMA3B-203ENST00000419007 WIPF1O43516 503 aa10.18□□□□□ -0.78
SEMA3B-203ENST00000419007 LINC01547P58512 204 aaPredicted RBP10.18□□□□□ -0.78
SEMA3B-203ENST00000419007 FBN1P35555 2871 aaKnown RBP10.18□□□□□ -0.78
SEMA3B-203ENST00000419007 LYPD5Q6UWN5 251 aa10.18□□□□□ -0.78
SEMA3B-203ENST00000419007 CAMK2N2Q96S95 79 aa10.18□□□□□ -0.78
SEMA3B-203ENST00000419007 ZNF73O43830 326 aaPredicted RBP10.17□□□□□ -0.78
SEMA3B-203ENST00000419007 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
SEMA3B-203ENST00000419007 LOC110117498A0A087WWA1 95 aa10.17□□□□□ -0.78
SEMA3B-203ENST00000419007 COX7BP24311 80 aa10.16□□□□□ -0.78
SEMA3B-203ENST00000419007 WFDC10BQ8IUB3 73 aa10.15□□□□□ -0.78
SEMA3B-203ENST00000419007 MUC7Q8TAX7 377 aa10.15□□□□□ -0.78
SEMA3B-203ENST00000419007 RPS28P62857 69 aaKnown RBP10.14□□□□□ -0.79
SEMA3B-203ENST00000419007 TRAV10A0A0B4J240 114 aa10.13□□□□□ -0.79
SEMA3B-203ENST00000419007 OXTP01178 125 aa10.11□□□□□ -0.79
SEMA3B-203ENST00000419007 GVQW2A0A096LPI5 108 aaPredicted RBP10.11□□□□□ -0.79
SEMA3B-203ENST00000419007 PDE6GP18545 87 aa10.11□□□□□ -0.79
SEMA3B-203ENST00000419007 Q6ZRU5 148 aa10.11□□□□□ -0.79
SEMA3B-203ENST00000419007 RETNQ9HD89 108 aa10.11□□□□□ -0.79
SEMA3B-203ENST00000419007 SNURFQ9Y675 71 aa10.11□□□□□ -0.79
SEMA3B-203ENST00000419007 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.1□□□□□ -0.79
SEMA3B-203ENST00000419007 KPRPQ5T749 579 aaPredicted RBP10.09□□□□□ -0.79
SEMA3B-203ENST00000419007 ELOF1P60002 83 aaKnown RBP10.09□□□□□ -0.79
SEMA3B-203ENST00000419007 VPREB1P12018 145 aa10.08□□□□□ -0.8
SEMA3B-203ENST00000419007 TRAV7A0A075B6U4 112 aa10.08□□□□□ -0.8
SEMA3B-203ENST00000419007 HRCT1Q6UXD1 115 aa10.07□□□□□ -0.8
SEMA3B-203ENST00000419007 DEFB105AQ8NG35 78 aa10.06□□□□□ -0.8
SEMA3B-203ENST00000419007 NOTCH1P46531 2555 aa10.06□□□□□ -0.8
SEMA3B-203ENST00000419007 H3BQ85 93 aa10.06□□□□□ -0.8
SEMA3B-203ENST00000419007 M0R378 163 aa10.06□□□□□ -0.8
SEMA3B-203ENST00000419007 TRBV7-4A0A0J9YYF1 115 aa10.06□□□□□ -0.8
SEMA3B-203ENST00000419007 C4orf26Q17RF5 130 aa10.06□□□□□ -0.8
SEMA3B-203ENST00000419007 IGKV2D-24A0A075B6R9 120 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 FAM236DA0A1B0GTK5 79 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 FAM236CP0DP71 79 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 CXCL6P80162 114 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 EGFEM1PQ0D2K5 195 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 Q6ZTC4 211 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 Q8N9L7 120 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 C1orf43Q9BWL3 253 aa10.05□□□□□ -0.8
SEMA3B-203ENST00000419007 TENM3Q9P273 2699 aa10.04□□□□□ -0.8
SEMA3B-203ENST00000419007 RMI2Q96E14 147 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms