RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 C6orf48Q9UBA6 75 aa7.08□□□□□ -1.28
SMPD4P1-201ENST00000416717 PLECQ15149 4684 aaKnown RBP7.08□□□□□ -1.28
SMPD4P1-201ENST00000416717 LECT2O14960 151 aa7.08□□□□□ -1.28
SMPD4P1-201ENST00000416717 LINC00337Q8N6G1 96 aa7.08□□□□□ -1.28
SMPD4P1-201ENST00000416717 DYNC2H1Q8NCM8 4307 aaKnown RBP7.07□□□□□ -1.28
SMPD4P1-201ENST00000416717 COX17Q14061 63 aa7.07□□□□□ -1.28
SMPD4P1-201ENST00000416717 TEN1Q86WV5 123 aa7.07□□□□□ -1.28
SMPD4P1-201ENST00000416717 LYRM7Q5U5X0 104 aa7.07□□□□□ -1.28
SMPD4P1-201ENST00000416717 Q6ZRU5 148 aa7.07□□□□□ -1.28
SMPD4P1-201ENST00000416717 OR13C6PQ8NH95 151 aa7.07□□□□□ -1.28
SMPD4P1-201ENST00000416717 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
SMPD4P1-201ENST00000416717 DNAH1Q9P2D7 4330 aa7.06□□□□□ -1.28
SMPD4P1-201ENST00000416717 STARD9Q9P2P6 4700 aa7.06□□□□□ -1.28
SMPD4P1-201ENST00000416717 TRBV30A0A0K0K1B3 111 aa7.06□□□□□ -1.28
SMPD4P1-201ENST00000416717 CCDC179H3BU77 68 aa7.06□□□□□ -1.28
SMPD4P1-201ENST00000416717 CLEC2BQ92478 149 aa7.06□□□□□ -1.28
SMPD4P1-201ENST00000416717 NUPR2A6NF83 97 aa7.06□□□□□ -1.28
SMPD4P1-201ENST00000416717 TRAV13-2A0A0B4J235 113 aa7.05□□□□□ -1.28
SMPD4P1-201ENST00000416717 Q8NDZ9 215 aa7.05□□□□□ -1.28
SMPD4P1-201ENST00000416717 XAGE1AQ9HD64 81 aa7.05□□□□□ -1.28
SMPD4P1-201ENST00000416717 TRBV20-1A0A075B6N2 111 aa7.04□□□□□ -1.28
SMPD4P1-201ENST00000416717 PPDPFQ9H3Y8 114 aa7.04□□□□□ -1.28
SMPD4P1-201ENST00000416717 DNAH10Q8IVF4 4471 aa7.04□□□□□ -1.28
SMPD4P1-201ENST00000416717 USP17L23D6RBM5 183 aa7.04□□□□□ -1.28
SMPD4P1-201ENST00000416717 COX6CP09669 75 aa7.04□□□□□ -1.28
SMPD4P1-201ENST00000416717 NDUFV3P56181 108 aaKnown RBP7.04□□□□□ -1.28
SMPD4P1-201ENST00000416717 TGP01266 2768 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 GVQW2A0A096LPI5 108 aaPredicted RBP7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 NCR3O14931 201 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 GAGE2BQ13066 116 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 GAGE2EQ4V326 116 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 ANKRD29Q8N6D5 301 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 GAGE2DQ9UEU5 116 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 KRTAP21-3Q3LHN1 58 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 RMI2Q96E14 147 aa7.03□□□□□ -1.28
SMPD4P1-201ENST00000416717 SYCNQ0VAF6 134 aa7.02□□□□□ -1.29
SMPD4P1-201ENST00000416717 SMIM11BQ8TCY0 68 aa7.02□□□□□ -1.29
SMPD4P1-201ENST00000416717 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
SMPD4P1-201ENST00000416717 C9JAW5 83 aa7.02□□□□□ -1.29
SMPD4P1-201ENST00000416717 TTC32Q5I0X7 151 aa7.02□□□□□ -1.29
SMPD4P1-201ENST00000416717 FBN3Q75N90 2809 aa7.01□□□□□ -1.29
SMPD4P1-201ENST00000416717 SNCGO76070 127 aa7.01□□□□□ -1.29
SMPD4P1-201ENST00000416717 ATXN8Q156A1 80 aa7.01□□□□□ -1.29
SMPD4P1-201ENST00000416717 SLPIP03973 132 aa7.01□□□□□ -1.29
SMPD4P1-201ENST00000416717 PSCAO43653 123 aa7□□□□□ -1.29
SMPD4P1-201ENST00000416717 LINC01620Q4KN68 170 aa6.99□□□□□ -1.29
SMPD4P1-201ENST00000416717 M0R2N4 97 aa6.99□□□□□ -1.29
SMPD4P1-201ENST00000416717 NDUFC2O95298 119 aa6.99□□□□□ -1.29
SMPD4P1-201ENST00000416717 RPL28P46779 137 aaKnown RBP6.99□□□□□ -1.29
SMPD4P1-201ENST00000416717 RPL18AQ02543 176 aaKnown RBP6.99□□□□□ -1.29
SMPD4P1-201ENST00000416717 Q6ZRP5 223 aa6.99□□□□□ -1.29
SMPD4P1-201ENST00000416717 NDUFC2-KCTD14E9PQ53 114 aa6.98□□□□□ -1.29
SMPD4P1-201ENST00000416717 S100A7L2Q5SY68 101 aa6.98□□□□□ -1.29
SMPD4P1-201ENST00000416717 FAM218AQ96MZ4 157 aa6.98□□□□□ -1.29
SMPD4P1-201ENST00000416717 LST1O00453 97 aa6.98□□□□□ -1.29
SMPD4P1-201ENST00000416717 SLC25A20O43772 301 aa6.98□□□□□ -1.29
SMPD4P1-201ENST00000416717 Q6Q795 121 aa6.97□□□□□ -1.29
SMPD4P1-201ENST00000416717 MUC7Q8TAX7 377 aa6.97□□□□□ -1.29
SMPD4P1-201ENST00000416717 NBDYA0A0U1RRE5 68 aa6.96□□□□□ -1.3
SMPD4P1-201ENST00000416717 TMEM126AQ9H061 195 aa6.96□□□□□ -1.3
SMPD4P1-201ENST00000416717 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.94□□□□□ -1.3
SMPD4P1-201ENST00000416717 A0A087WYN8 130 aa6.94□□□□□ -1.3
SMPD4P1-201ENST00000416717 C9orf129Q5T035 196 aaKnown RBP6.94□□□□□ -1.3
SMPD4P1-201ENST00000416717 TRBV10-2A0A0K0K1G8 114 aa6.94□□□□□ -1.3
SMPD4P1-201ENST00000416717 KMT2AQ03164 3969 aa6.93□□□□□ -1.3
SMPD4P1-201ENST00000416717 TRBV10-3A0A0K0K1G6 114 aa6.93□□□□□ -1.3
SMPD4P1-201ENST00000416717 VPREB1P12018 145 aa6.93□□□□□ -1.3
SMPD4P1-201ENST00000416717 C6orf99Q4VX62 202 aa6.93□□□□□ -1.3
SMPD4P1-201ENST00000416717 VPS13DQ5THJ4 4388 aa6.93□□□□□ -1.3
SMPD4P1-201ENST00000416717 TEX49A0A1B0GTD5 131 aa6.92□□□□□ -1.3
SMPD4P1-201ENST00000416717 FAM168BA1KXE4 195 aa6.92□□□□□ -1.3
SMPD4P1-201ENST00000416717 SERTAD4-AS1Q5TG53 156 aa6.92□□□□□ -1.3
SMPD4P1-201ENST00000416717 H0YGX0 51 aa6.91□□□□□ -1.3
SMPD4P1-201ENST00000416717 IGLV6-57P01721 117 aa6.91□□□□□ -1.3
SMPD4P1-201ENST00000416717 V9GYY9 64 aa6.91□□□□□ -1.3
SMPD4P1-201ENST00000416717 TRACP01848 142 aa6.9□□□□□ -1.31
SMPD4P1-201ENST00000416717 M0R378 163 aa6.89□□□□□ -1.31
SMPD4P1-201ENST00000416717 DNAL4O96015 105 aa6.89□□□□□ -1.31
SMPD4P1-201ENST00000416717 TLX1NBP0CAT3 122 aa6.89□□□□□ -1.31
SMPD4P1-201ENST00000416717 NKAPP1Q8N9T2 125 aa6.89□□□□□ -1.31
SMPD4P1-201ENST00000416717 TRAV23DV6A0A075B6W5 121 aa6.89□□□□□ -1.31
SMPD4P1-201ENST00000416717 LY6G6CO95867 125 aa6.89□□□□□ -1.31
SMPD4P1-201ENST00000416717 BAALC-AS2P0C853 105 aa6.89□□□□□ -1.31
SMPD4P1-201ENST00000416717 IGKV2-24A0A0C4DH68 120 aa6.88□□□□□ -1.31
SMPD4P1-201ENST00000416717 LOC107984640A0A0U1RRK4 108 aa6.88□□□□□ -1.31
SMPD4P1-201ENST00000416717 H3BT86 120 aa6.88□□□□□ -1.31
SMPD4P1-201ENST00000416717 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
SMPD4P1-201ENST00000416717 LRCOL1A6NCL2 159 aa6.88□□□□□ -1.31
SMPD4P1-201ENST00000416717 FAM19A5Q7Z5A7 132 aaPredicted RBP6.88□□□□□ -1.31
SMPD4P1-201ENST00000416717 RPL37AP8A6NKH3 93 aa6.87□□□□□ -1.31
SMPD4P1-201ENST00000416717 FUSP35637 526 aaKnown RBP eCLIP6.87□□□□□ -1.311e-7■■□□□ 13.7
SMPD4P1-201ENST00000416717 WWC2-AS2Q96NR7 200 aa6.87□□□□□ -1.31
SMPD4P1-201ENST00000416717 A0A096LNI7 61 aa6.86□□□□□ -1.31
SMPD4P1-201ENST00000416717 ZNF73O43830 326 aaPredicted RBP6.86□□□□□ -1.31
SMPD4P1-201ENST00000416717 CNBPP62633 177 aaKnown RBP6.86□□□□□ -1.31
SMPD4P1-201ENST00000416717 C14orf177Q52M58 125 aa6.86□□□□□ -1.31
SMPD4P1-201ENST00000416717 C7orf33Q8WU49 177 aa6.86□□□□□ -1.31
SMPD4P1-201ENST00000416717 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
SMPD4P1-201ENST00000416717 LINC01600Q96MT4 127 aa6.86□□□□□ -1.31
SMPD4P1-201ENST00000416717 KRTAP7-1Q8IUC3 87 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms