RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 ZNF861PO60384 105 aa7.95□□□□□ -1.14
CTHRC1-202ENST00000415886 RPL24P83731 157 aaKnown RBP7.95□□□□□ -1.14
CTHRC1-202ENST00000415886 LINC00167Q96N53 147 aa7.95□□□□□ -1.14
CTHRC1-202ENST00000415886 LEPROTL1O95214 131 aa7.94□□□□□ -1.14
CTHRC1-202ENST00000415886 S100A6P06703 90 aa7.94□□□□□ -1.14
CTHRC1-202ENST00000415886 RPL28P46779 137 aaKnown RBP7.94□□□□□ -1.14
CTHRC1-202ENST00000415886 LINC00158P58513 81 aa7.94□□□□□ -1.14
CTHRC1-202ENST00000415886 MUC2Q02817 5179 aa7.94□□□□□ -1.14
CTHRC1-202ENST00000415886 KRTAP1-4P0C5Y4 121 aa7.93□□□□□ -1.14
CTHRC1-202ENST00000415886 HSPB8Q9UJY1 196 aa7.93□□□□□ -1.14
CTHRC1-202ENST00000415886 TMA7Q9Y2S6 64 aaKnown RBP7.93□□□□□ -1.14
CTHRC1-202ENST00000415886 IGLV1-50A0A075B6I6 118 aa7.92□□□□□ -1.14
CTHRC1-202ENST00000415886 TMEM223A0PJW6 202 aa7.92□□□□□ -1.14
CTHRC1-202ENST00000415886 COA6Q5JTJ3 125 aaKnown RBP7.92□□□□□ -1.14
CTHRC1-202ENST00000415886 SND1-IT1Q9HBX3 110 aa7.92□□□□□ -1.14
CTHRC1-202ENST00000415886 IGLV5-37A0A075B6J1 123 aa7.91□□□□□ -1.14
CTHRC1-202ENST00000415886 A0A0U1RRA0 63 aa7.91□□□□□ -1.14
CTHRC1-202ENST00000415886 LINC00587B1AMM8 73 aa7.91□□□□□ -1.14
CTHRC1-202ENST00000415886 BCE1O60756 84 aa7.91□□□□□ -1.14
CTHRC1-202ENST00000415886 SERF1AO75920 110 aa7.91□□□□□ -1.14
CTHRC1-202ENST00000415886 FABP4P15090 132 aa7.91□□□□□ -1.14
CTHRC1-202ENST00000415886 KRTAP9-6A0A140TA67 174 aa7.9□□□□□ -1.14
CTHRC1-202ENST00000415886 UBE2AP49459 152 aa7.9□□□□□ -1.14
CTHRC1-202ENST00000415886 MEIG1Q5JSS6 88 aa7.9□□□□□ -1.14
CTHRC1-202ENST00000415886 LCE2AQ5TA79 106 aaPredicted RBP7.9□□□□□ -1.14
CTHRC1-202ENST00000415886 IGKV2-28A0A075B6P5 120 aa7.89□□□□□ -1.15
CTHRC1-202ENST00000415886 IGKV2D-28P01615 120 aa7.89□□□□□ -1.15
CTHRC1-202ENST00000415886 RPL13AP40429 203 aaKnown RBP7.89□□□□□ -1.15
CTHRC1-202ENST00000415886 HERV-K104P63124 156 aa7.88□□□□□ -1.15
CTHRC1-202ENST00000415886 MAP1LC3CQ9BXW4 147 aa7.88□□□□□ -1.15
CTHRC1-202ENST00000415886 MYMXA0A1B0GTQ4 84 aa7.87□□□□□ -1.15
CTHRC1-202ENST00000415886 PLNP26678 52 aa7.87□□□□□ -1.15
CTHRC1-202ENST00000415886 HERVK_113P61574 105 aa7.87□□□□□ -1.15
CTHRC1-202ENST00000415886 DPM2O94777 84 aa7.86□□□□□ -1.15
CTHRC1-202ENST00000415886 SMIM13P0DJ93 91 aa7.86□□□□□ -1.15
CTHRC1-202ENST00000415886 VPREB1P12018 145 aa7.86□□□□□ -1.15
CTHRC1-202ENST00000415886 S100A2P29034 98 aa7.86□□□□□ -1.15
CTHRC1-202ENST00000415886 LINC00310P59036 64 aa7.86□□□□□ -1.15
CTHRC1-202ENST00000415886 NDUFA12Q9UI09 145 aa7.86□□□□□ -1.15
CTHRC1-202ENST00000415886 C5orf52A6NGY3 159 aa7.85□□□□□ -1.15
CTHRC1-202ENST00000415886 PLEKHB2Q96CS7 222 aa7.85□□□□□ -1.15
CTHRC1-202ENST00000415886 LEPROTO15243 131 aa7.84□□□□□ -1.15
CTHRC1-202ENST00000415886 SNRPEP62304 92 aaKnown RBP7.84□□□□□ -1.15
CTHRC1-202ENST00000415886 FAM19A1Q7Z5A9 133 aa7.84□□□□□ -1.15
CTHRC1-202ENST00000415886 M0R378 163 aa7.83□□□□□ -1.16
CTHRC1-202ENST00000415886 TSPAN13O95857 204 aa7.83□□□□□ -1.16
CTHRC1-202ENST00000415886 IGKCP01834 107 aa7.83□□□□□ -1.16
CTHRC1-202ENST00000415886 CRYGAP11844 174 aa7.83□□□□□ -1.16
CTHRC1-202ENST00000415886 BOD1L2Q8IYS8 172 aa7.83□□□□□ -1.16
CTHRC1-202ENST00000415886 HIST3H2BBQ8N257 126 aa7.83□□□□□ -1.16
CTHRC1-202ENST00000415886 MIR7-3HGQ8N6C7 128 aa7.83□□□□□ -1.16
CTHRC1-202ENST00000415886 LGALS3P17931 250 aaKnown RBP7.82□□□□□ -1.16
CTHRC1-202ENST00000415886 S100A12P80511 92 aa7.82□□□□□ -1.16
CTHRC1-202ENST00000415886 PMCHL2Q9BQD1 86 aa7.82□□□□□ -1.16
CTHRC1-202ENST00000415886 TMEM126AQ9H061 195 aa7.82□□□□□ -1.16
CTHRC1-202ENST00000415886 TMEM238C9JI98 176 aa7.81□□□□□ -1.16
CTHRC1-202ENST00000415886 J3QQQ9 107 aa7.81□□□□□ -1.16
CTHRC1-202ENST00000415886 NMUP48645 174 aa7.8□□□□□ -1.16
CTHRC1-202ENST00000415886 PRLHP81277 87 aa7.8□□□□□ -1.16
CTHRC1-202ENST00000415886 TYMSOSQ8TAI1 123 aa7.8□□□□□ -1.16
CTHRC1-202ENST00000415886 HIST1H2BLQ99880 126 aa7.8□□□□□ -1.16
CTHRC1-202ENST00000415886 MIEN1Q9BRT3 115 aa7.79□□□□□ -1.16
CTHRC1-202ENST00000415886 IGKV2D-26A0A0A0MRZ7 120 aa7.78□□□□□ -1.16
CTHRC1-202ENST00000415886 Q8NDZ9 215 aa7.78□□□□□ -1.16
CTHRC1-202ENST00000415886 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
CTHRC1-202ENST00000415886 SYS1-DBNDD2H3BUS1 97 aa7.77□□□□□ -1.17
CTHRC1-202ENST00000415886 NCR3O14931 201 aa7.77□□□□□ -1.17
CTHRC1-202ENST00000415886 KRTAP13-1Q8IUC0 172 aa7.77□□□□□ -1.17
CTHRC1-202ENST00000415886 HIGD2AQ9BW72 106 aa7.77□□□□□ -1.17
CTHRC1-202ENST00000415886 ANAPC11Q9NYG5 84 aa7.77□□□□□ -1.17
CTHRC1-202ENST00000415886 A0A087X002 238 aa7.76□□□□□ -1.17
CTHRC1-202ENST00000415886 TSPEAR-AS2P59090 65 aa7.76□□□□□ -1.17
CTHRC1-202ENST00000415886 FAM229BQ4G0N7 80 aa7.75□□□□□ -1.17
CTHRC1-202ENST00000415886 DAND5Q8N907 189 aa7.75□□□□□ -1.17
CTHRC1-202ENST00000415886 ETDCA0A1B0GVM5 59 aa7.74□□□□□ -1.17
CTHRC1-202ENST00000415886 C20orf202A1L168 122 aa7.74□□□□□ -1.17
CTHRC1-202ENST00000415886 PRYO14603 147 aa7.74□□□□□ -1.17
CTHRC1-202ENST00000415886 AKR1D1P51857 326 aa7.74□□□□□ -1.17
CTHRC1-202ENST00000415886 KRTDAPP60985 99 aa7.74□□□□□ -1.17
CTHRC1-202ENST00000415886 PET117Q6UWS5 81 aa7.74□□□□□ -1.17
CTHRC1-202ENST00000415886 E9PLD3 99 aa7.73□□□□□ -1.17
CTHRC1-202ENST00000415886 S100A7L2Q5SY68 101 aa7.73□□□□□ -1.17
CTHRC1-202ENST00000415886 ZNF706Q9Y5V0 76 aaPredicted RBP7.73□□□□□ -1.17
CTHRC1-202ENST00000415886 TRBV10-3A0A0K0K1G6 114 aa7.72□□□□□ -1.17
CTHRC1-202ENST00000415886 DDTP30046 118 aa7.72□□□□□ -1.17
CTHRC1-202ENST00000415886 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
CTHRC1-202ENST00000415886 KCNQ1DNQ9H478 68 aa7.72□□□□□ -1.17
CTHRC1-202ENST00000415886 LOC107984156A0A0G2JMH3 177 aa7.71□□□□□ -1.18
CTHRC1-202ENST00000415886 TRBV10-2A0A0K0K1G8 114 aa7.71□□□□□ -1.18
CTHRC1-202ENST00000415886 C3orf79P0CE67 100 aa7.71□□□□□ -1.18
CTHRC1-202ENST00000415886 ARL17AQ8IVW1 177 aa7.71□□□□□ -1.18
CTHRC1-202ENST00000415886 LINC00337Q8N6G1 96 aa7.71□□□□□ -1.18
CTHRC1-202ENST00000415886 A0A0J9YXY3 114 aa7.7□□□□□ -1.18
CTHRC1-202ENST00000415886 NPC2P61916 151 aa7.7□□□□□ -1.18
CTHRC1-202ENST00000415886 LINC01545Q5VT33 79 aa7.7□□□□□ -1.18
CTHRC1-202ENST00000415886 SPANXB1Q9NS25 103 aaPredicted RBP7.7□□□□□ -1.18
CTHRC1-202ENST00000415886 NDUFC2O95298 119 aa7.69□□□□□ -1.18
CTHRC1-202ENST00000415886 LINC00304Q8N9R0 145 aa7.69□□□□□ -1.18
CTHRC1-202ENST00000415886 SMCR5Q8TEV8 140 aa7.69□□□□□ -1.18
CTHRC1-202ENST00000415886 LOC105371267A0A1B0GV96 52 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms