RNA–Protein interactions for RNA: ENST00000415620.1

LINC00428-201, long intergenic non-protein coding RNA 428, humanhuman

TSL 5 BASIC

Gene LINC00428, Length 227 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00428-201ENST00000415620 IFNA1P01562 189 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 ANXA3P12429 323 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 PDE6GP18545 87 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 SPRR1BP22528 89 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 PFN2P35080 140 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 NMUP48645 174 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 NDUFA6P56556 154 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 TAS2R30P59541 319 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 RPL39P62891 51 aaKnown RBP0.56□□□□□ -2.32
LINC00428-201ENST00000415620 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 KHDC3LQ587J8 217 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 CROCCP2Q86T23 111 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 TPPP3Q9BW30 176 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 KCNQ1DNQ9H478 68 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 ACOT13Q9NPJ3 140 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 CRIPTQ9P021 101 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 GSKIPQ9P0R6 139 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 MTFP1Q9UDX5 166 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 EPDR1Q9UM22 224 aa0.56□□□□□ -2.32
LINC00428-201ENST00000415620 NCR3O14931 201 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 AKR1D1P51857 326 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 HBBP68871 147 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 COX19Q49B96 90 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 FAM210AQ96ND0 272 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 SEC22CQ9BRL7 303 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 NDUFB11Q9NX14 153 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 LAMTOR3Q9UHA4 124 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 KCNIP3Q9Y2W7 256 aa0.55□□□□□ -2.32
LINC00428-201ENST00000415620 TRBV10-3A0A0K0K1G6 114 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 A0A0U1RRA0 63 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 IGSF23A1L1A6 192 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 A8MUN3 132 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 IGLC6P0CF74 106 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 CXCL5P42830 114 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 SULT1A1P50225 295 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 MLLT11Q13015 90 aaPredicted RBP0.54□□□□□ -2.32
LINC00428-201ENST00000415620 IL18Q14116 193 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 Q6ZN92 141 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 CAMK2N1Q7Z7J9 78 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 LINC01561Q8N1V8 128 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 S100A16Q96FQ6 103 aaKnown RBP0.54□□□□□ -2.32
LINC00428-201ENST00000415620 AMELXQ99217 191 aa0.54□□□□□ -2.32
LINC00428-201ENST00000415620 TRBV6-5A0A0K0K1A5 114 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 TRDV1A0A1B0GX56 115 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 FAM74A7A6NL05 159 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 RAB3DO95716 219 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 TRGC1P0CF51 173 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 SDC2P34741 201 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 POLR2KP53803 58 aaKnown RBP0.53□□□□□ -2.32
LINC00428-201ENST00000415620 TAS2R45P59539 299 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 FAM74A3Q4VXF1 159 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 UBE2NLQ5JXB2 153 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 FMC1Q96HJ9 113 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 ATP6V1G3Q96LB4 118 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 CNBD2Q96M20 576 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 ST20Q9HBF5 79 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 CDKN2A-AS1Q9UH64 79 aa0.53□□□□□ -2.32
LINC00428-201ENST00000415620 TRBV27A0A0K0K1C4 114 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 PEX7O00628 323 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 ZNF73O43830 326 aaPredicted RBP0.52□□□□□ -2.33
LINC00428-201ENST00000415620 LTAP01374 205 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 GNAO1P09471 354 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 PTMSP20962 102 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 FCER1GP30273 86 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 BCAP31P51572 246 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 MRPS36P82909 103 aaKnown RBP0.52□□□□□ -2.33
LINC00428-201ENST00000415620 SMAGPQ0VAQ4 97 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 DEFB105AQ8NG35 78 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 ANP32BQ92688 251 aaKnown RBP0.52□□□□□ -2.33
LINC00428-201ENST00000415620 ZFP30Q9Y2G7 519 aa0.52□□□□□ -2.33
LINC00428-201ENST00000415620 TRBV7-7A0A0K0K1E9 115 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 ANKRD20A5PA0PJZ0 165 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 INMT-MINDY4F8WBC2 141 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 LST1O00453 97 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 HPGDSO60760 199 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 MT1AP04731 61 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 P0C880 135 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 CSAG1Q6PB30 78 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 TMEM229BQ8NBD8 167 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 COX7B2Q8TF08 81 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 PYDC1Q8WXC3 89 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 TMEM191AQ9H0A3 160 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 MCUBQ9NWR8 336 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 SCP2D1Q9UJQ7 156 aa0.51□□□□□ -2.33
LINC00428-201ENST00000415620 A0A087WXM4 84 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 DISC1C4P0D8 188 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 GCHFRP30047 84 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 S100A11P31949 105 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 UBE2G1P62253 170 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 LINC00299Q6ZSB3 139 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 HIST1H4GQ99525 98 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 MRPS26Q9BYN8 205 aaKnown RBP0.5□□□□□ -2.33
LINC00428-201ENST00000415620 WDR61Q9GZS3 305 aaKnown RBP0.5□□□□□ -2.33
LINC00428-201ENST00000415620 FAM107BQ9H098 131 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 SPANXA1Q9NS26 97 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 ERG28Q9UKR5 140 aa0.5□□□□□ -2.33
LINC00428-201ENST00000415620 LSM5Q9Y4Y9 91 aaKnown RBP0.5□□□□□ -2.33
LINC00428-201ENST00000415620 PIGBOS1A0A0B4J2F0 54 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 A0A1W2PPV4 95 aa0.49□□□□□ -2.33
LINC00428-201ENST00000415620 F8WEM9 126 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms