RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 CRPP02741 224 aa11.48□□□□□ -0.57
PTPRC-206ENST00000413409 MALP21145 153 aa11.48□□□□□ -0.57
PTPRC-206ENST00000413409 LINC00158P58513 81 aa11.48□□□□□ -0.57
PTPRC-206ENST00000413409 KLK12Q9UKR0 248 aa11.48□□□□□ -0.57
PTPRC-206ENST00000413409 IGLV10-54A0A075B6I4 117 aa11.47□□□□□ -0.57
PTPRC-206ENST00000413409 GAGE12HA6NDE8 117 aa11.47□□□□□ -0.57
PTPRC-206ENST00000413409 COX6CP09669 75 aa11.47□□□□□ -0.57
PTPRC-206ENST00000413409 FAT1Q14517 4588 aa11.46□□□□□ -0.57
PTPRC-206ENST00000413409 CKS1BP61024 79 aa11.46□□□□□ -0.57
PTPRC-206ENST00000413409 WFDC2Q14508 124 aa11.46□□□□□ -0.57
PTPRC-206ENST00000413409 ATXN8Q156A1 80 aa11.46□□□□□ -0.57
PTPRC-206ENST00000413409 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
PTPRC-206ENST00000413409 WFDC10BQ8IUB3 73 aa11.46□□□□□ -0.57
PTPRC-206ENST00000413409 C15orf53Q8NAA6 179 aa11.46□□□□□ -0.57
PTPRC-206ENST00000413409 M0QXV9 152 aa11.45□□□□□ -0.58
PTPRC-206ENST00000413409 COX17Q14061 63 aa11.45□□□□□ -0.58
PTPRC-206ENST00000413409 TRAV13-2A0A0B4J235 113 aa11.44□□□□□ -0.58
PTPRC-206ENST00000413409 ESRGQ1W209 222 aa11.44□□□□□ -0.58
PTPRC-206ENST00000413409 LINC01556Q5JQF7 62 aa11.44□□□□□ -0.58
PTPRC-206ENST00000413409 CCL18P55774 89 aa11.43□□□□□ -0.58
PTPRC-206ENST00000413409 SND1-IT1Q9HBX3 110 aa11.43□□□□□ -0.58
PTPRC-206ENST00000413409 TNP2Q05952 138 aa11.42□□□□□ -0.58
PTPRC-206ENST00000413409 SPAG11BQ08648 103 aa11.42□□□□□ -0.58
PTPRC-206ENST00000413409 UBE2WQ96B02 151 aa11.42□□□□□ -0.58
PTPRC-206ENST00000413409 PFN2P35080 140 aa11.41□□□□□ -0.58
PTPRC-206ENST00000413409 SMCPP49901 116 aaPredicted RBP11.41□□□□□ -0.58
PTPRC-206ENST00000413409 C2orf82Q6UX34 121 aa11.41□□□□□ -0.58
PTPRC-206ENST00000413409 LINC01600Q96MT4 127 aa11.41□□□□□ -0.58
PTPRC-206ENST00000413409 VPS13BQ7Z7G8 4022 aa11.4□□□□□ -0.58
PTPRC-206ENST00000413409 LINC01620Q4KN68 170 aa11.4□□□□□ -0.58
PTPRC-206ENST00000413409 MTURNQ8N3F0 131 aa11.4□□□□□ -0.58
PTPRC-206ENST00000413409 C1orf134Q5TEV5 83 aa11.39□□□□□ -0.59
PTPRC-206ENST00000413409 IGKV2-28A0A075B6P5 120 aa11.38□□□□□ -0.59
PTPRC-206ENST00000413409 LST1O00453 97 aa11.38□□□□□ -0.59
PTPRC-206ENST00000413409 IGKV2D-28P01615 120 aa11.38□□□□□ -0.59
PTPRC-206ENST00000413409 INAFM2P0DMQ5 153 aa11.38□□□□□ -0.59
PTPRC-206ENST00000413409 ETDBQ3ZM63 59 aa11.38□□□□□ -0.59
PTPRC-206ENST00000413409 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
PTPRC-206ENST00000413409 GVQW2A0A096LPI5 108 aaPredicted RBP11.37□□□□□ -0.59
PTPRC-206ENST00000413409 J3QR89 54 aa11.37□□□□□ -0.59
PTPRC-206ENST00000413409 DNAH10OSP0CZ25 163 aa11.37□□□□□ -0.59
PTPRC-206ENST00000413409 KRTAP26-1Q6PEX3 210 aa11.37□□□□□ -0.59
PTPRC-206ENST00000413409 C9JAW5 83 aa11.36□□□□□ -0.59
PTPRC-206ENST00000413409 SLC25A20O43772 301 aa11.36□□□□□ -0.59
PTPRC-206ENST00000413409 NDUFC2O95298 119 aa11.36□□□□□ -0.59
PTPRC-206ENST00000413409 LINC00337Q8N6G1 96 aa11.36□□□□□ -0.59
PTPRC-206ENST00000413409 TRBV10-2A0A0K0K1G8 114 aa11.35□□□□□ -0.59
PTPRC-206ENST00000413409 RPL28P46779 137 aaKnown RBP11.35□□□□□ -0.59
PTPRC-206ENST00000413409 TEN1Q86WV5 123 aa11.35□□□□□ -0.59
PTPRC-206ENST00000413409 EPM2AB3EWF7 344 aa11.35□□□□□ -0.59
PTPRC-206ENST00000413409 H3BT86 120 aa11.34□□□□□ -0.59
PTPRC-206ENST00000413409 NTN5Q8WTR8 489 aaPredicted RBP11.34□□□□□ -0.59
PTPRC-206ENST00000413409 C1orf43Q9BWL3 253 aa11.34□□□□□ -0.59
PTPRC-206ENST00000413409 HMCN2Q8NDA2 5059 aa11.33□□□□□ -0.6
PTPRC-206ENST00000413409 F8WDY8 70 aa11.33□□□□□ -0.6
PTPRC-206ENST00000413409 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
PTPRC-206ENST00000413409 PPDPFLQ8WWR9 84 aa11.33□□□□□ -0.6
PTPRC-206ENST00000413409 CLEC2BQ92478 149 aa11.33□□□□□ -0.6
PTPRC-206ENST00000413409 ANKRD29Q8N6D5 301 aa11.32□□□□□ -0.6
PTPRC-206ENST00000413409 CARD19Q96LW7 228 aa11.32□□□□□ -0.6
PTPRC-206ENST00000413409 C10orf25Q5T742 122 aa11.31□□□□□ -0.6
PTPRC-206ENST00000413409 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
PTPRC-206ENST00000413409 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
PTPRC-206ENST00000413409 C6orf223Q8N319 242 aa11.31□□□□□ -0.6
PTPRC-206ENST00000413409 TRACP01848 142 aa11.3□□□□□ -0.6
PTPRC-206ENST00000413409 C2orf48Q96LS8 159 aa11.3□□□□□ -0.6
PTPRC-206ENST00000413409 VPS25Q9BRG1 176 aa11.3□□□□□ -0.6
PTPRC-206ENST00000413409 UPK3BQ9BT76 320 aa11.3□□□□□ -0.6
PTPRC-206ENST00000413409 CBY1Q9Y3M2 126 aa11.3□□□□□ -0.6
PTPRC-206ENST00000413409 LINC00588Q9Y4M8 146 aa11.3□□□□□ -0.6
PTPRC-206ENST00000413409 C9orf116Q5BN46 136 aaPredicted RBP11.29□□□□□ -0.6
PTPRC-206ENST00000413409 C15orf56Q8N910 161 aa11.29□□□□□ -0.6
PTPRC-206ENST00000413409 SMIM11BQ8TCY0 68 aa11.28□□□□□ -0.6
PTPRC-206ENST00000413409 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
PTPRC-206ENST00000413409 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.61
PTPRC-206ENST00000413409 IGKV2D-24A0A075B6R9 120 aa11.26□□□□□ -0.61
PTPRC-206ENST00000413409 H0YGX0 51 aa11.26□□□□□ -0.61
PTPRC-206ENST00000413409 C4orf48Q5BLP8 95 aa11.26□□□□□ -0.61
PTPRC-206ENST00000413409 KRTAP10-2P60368 255 aa11.25□□□□□ -0.61
PTPRC-206ENST00000413409 LINC00526Q96FQ7 95 aa11.25□□□□□ -0.61
PTPRC-206ENST00000413409 CAMK2N2Q96S95 79 aa11.25□□□□□ -0.61
PTPRC-206ENST00000413409 HIGD2BQ4VC39 106 aa11.24□□□□□ -0.61
PTPRC-206ENST00000413409 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
PTPRC-206ENST00000413409 RMI2Q96E14 147 aa11.24□□□□□ -0.61
PTPRC-206ENST00000413409 TMEM126AQ9H061 195 aa11.23□□□□□ -0.61
PTPRC-206ENST00000413409 FAM218AQ96MZ4 157 aa11.21□□□□□ -0.61
PTPRC-206ENST00000413409 Q5VSD8 79 aa11.2□□□□□ -0.62
PTPRC-206ENST00000413409 Q6ZRU5 148 aa11.19□□□□□ -0.62
PTPRC-206ENST00000413409 Q8NDZ9 215 aa11.19□□□□□ -0.62
PTPRC-206ENST00000413409 Q9HAA7 133 aa11.19□□□□□ -0.62
PTPRC-206ENST00000413409 NBDYA0A0U1RRE5 68 aa11.18□□□□□ -0.62
PTPRC-206ENST00000413409 A0A1B0GX51 115 aa11.18□□□□□ -0.62
PTPRC-206ENST00000413409 NCR3O14931 201 aa11.18□□□□□ -0.62
PTPRC-206ENST00000413409 XGP55808 180 aa11.18□□□□□ -0.62
PTPRC-206ENST00000413409 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
PTPRC-206ENST00000413409 SYCNQ0VAF6 134 aa11.16□□□□□ -0.62
PTPRC-206ENST00000413409 DNAL4O96015 105 aa11.15□□□□□ -0.62
PTPRC-206ENST00000413409 IGLV6-57P01721 117 aa11.15□□□□□ -0.62
PTPRC-206ENST00000413409 PRR3P79522 188 aaKnown RBP11.15□□□□□ -0.62
PTPRC-206ENST00000413409 S100A7L2Q5SY68 101 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms