RNA–Protein interactions for RNA: ENST00000412899.5

ITGA6-204, Transcript of integrin subunit alpha 6, humanhuman

TSL 1 (best)

Gene ITGA6, Length 970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-204ENST00000412899 LPAP08519 4548 aa11.19□□□□□ -0.62
ITGA6-204ENST00000412899 MRPL55Q7Z7F7 128 aaKnown RBP11.18□□□□□ -0.62
ITGA6-204ENST00000412899 TP73-AS1Q9UF72 201 aa11.18□□□□□ -0.62
ITGA6-204ENST00000412899 PLNP26678 52 aa11.17□□□□□ -0.62
ITGA6-204ENST00000412899 MAP1LC3CQ9BXW4 147 aa11.17□□□□□ -0.62
ITGA6-204ENST00000412899 PMCHL2Q9BQD1 86 aa11.16□□□□□ -0.62
ITGA6-204ENST00000412899 SND1-IT1Q9HBX3 110 aa11.16□□□□□ -0.62
ITGA6-204ENST00000412899 DPM2O94777 84 aa11.15□□□□□ -0.62
ITGA6-204ENST00000412899 LINC00158P58513 81 aa11.15□□□□□ -0.62
ITGA6-204ENST00000412899 NKAPP1Q8N9T2 125 aa11.15□□□□□ -0.62
ITGA6-204ENST00000412899 GAGE10A6NGK3 116 aa11.13□□□□□ -0.63
ITGA6-204ENST00000412899 LINC00167Q96N53 147 aa11.13□□□□□ -0.63
ITGA6-204ENST00000412899 IGLV5-37A0A075B6J1 123 aa11.12□□□□□ -0.63
ITGA6-204ENST00000412899 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
ITGA6-204ENST00000412899 RPL37AP8A6NKH3 93 aa11.12□□□□□ -0.63
ITGA6-204ENST00000412899 ZNF861PO60384 105 aa11.12□□□□□ -0.63
ITGA6-204ENST00000412899 IGKCP01834 107 aa11.12□□□□□ -0.63
ITGA6-204ENST00000412899 NDUFA12Q9UI09 145 aa11.12□□□□□ -0.63
ITGA6-204ENST00000412899 ATP6V1G1O75348 118 aa11.11□□□□□ -0.63
ITGA6-204ENST00000412899 HERV-K104P63124 156 aa11.11□□□□□ -0.63
ITGA6-204ENST00000412899 MYMXA0A1B0GTQ4 84 aa11.1□□□□□ -0.63
ITGA6-204ENST00000412899 LEPROTO15243 131 aa11.1□□□□□ -0.63
ITGA6-204ENST00000412899 HERVK_113P61574 105 aa11.1□□□□□ -0.63
ITGA6-204ENST00000412899 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
ITGA6-204ENST00000412899 PLEKHB2Q96CS7 222 aa11.1□□□□□ -0.63
ITGA6-204ENST00000412899 SMIM13P0DJ93 91 aa11.09□□□□□ -0.63
ITGA6-204ENST00000412899 RPL24P83731 157 aaKnown RBP11.09□□□□□ -0.63
ITGA6-204ENST00000412899 SYS1-DBNDD2H3BUS1 97 aa11.08□□□□□ -0.64
ITGA6-204ENST00000412899 VPREB1P12018 145 aa11.08□□□□□ -0.64
ITGA6-204ENST00000412899 S100A1P23297 94 aa11.08□□□□□ -0.64
ITGA6-204ENST00000412899 LINC00587B1AMM8 73 aa11.07□□□□□ -0.64
ITGA6-204ENST00000412899 J3QQQ9 107 aa11.07□□□□□ -0.64
ITGA6-204ENST00000412899 TSPAN13O95857 204 aa11.07□□□□□ -0.64
ITGA6-204ENST00000412899 TSPEAR-AS2P59090 65 aa11.07□□□□□ -0.64
ITGA6-204ENST00000412899 BCE1O60756 84 aa11.06□□□□□ -0.64
ITGA6-204ENST00000412899 COA6Q5JTJ3 125 aaKnown RBP11.06□□□□□ -0.64
ITGA6-204ENST00000412899 IGKV2-28A0A075B6P5 120 aa11.05□□□□□ -0.64
ITGA6-204ENST00000412899 IGKV2D-28P01615 120 aa11.05□□□□□ -0.64
ITGA6-204ENST00000412899 LGALS3P17931 250 aaKnown RBP11.05□□□□□ -0.64
ITGA6-204ENST00000412899 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
ITGA6-204ENST00000412899 PET117Q6UWS5 81 aa11.04□□□□□ -0.64
ITGA6-204ENST00000412899 MIR7-3HGQ8N6C7 128 aa11.04□□□□□ -0.64
ITGA6-204ENST00000412899 Q8NDZ9 215 aa11.04□□□□□ -0.64
ITGA6-204ENST00000412899 RPL28P46779 137 aaKnown RBP11.03□□□□□ -0.64
ITGA6-204ENST00000412899 NMUP48645 174 aa11.02□□□□□ -0.65
ITGA6-204ENST00000412899 LINC01545Q5VT33 79 aa11.02□□□□□ -0.65
ITGA6-204ENST00000412899 C3orf79P0CE67 100 aa11.01□□□□□ -0.65
ITGA6-204ENST00000412899 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
ITGA6-204ENST00000412899 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
ITGA6-204ENST00000412899 A0A087X002 238 aa11□□□□□ -0.65
ITGA6-204ENST00000412899 E9PLD3 99 aa11□□□□□ -0.65
ITGA6-204ENST00000412899 CRYGAP11844 174 aa11□□□□□ -0.65
ITGA6-204ENST00000412899 KRTDAPP60985 99 aa11□□□□□ -0.65
ITGA6-204ENST00000412899 M0R378 163 aa10.99□□□□□ -0.65
ITGA6-204ENST00000412899 UBE2AP49459 152 aa10.99□□□□□ -0.65
ITGA6-204ENST00000412899 DAND5Q8N907 189 aa10.98□□□□□ -0.65
ITGA6-204ENST00000412899 TMEM238C9JI98 176 aa10.97□□□□□ -0.65
ITGA6-204ENST00000412899 TMEM126AQ9H061 195 aa10.96□□□□□ -0.65
ITGA6-204ENST00000412899 NCR3O14931 201 aa10.95□□□□□ -0.66
ITGA6-204ENST00000412899 A0A0J9YXY3 114 aa10.94□□□□□ -0.66
ITGA6-204ENST00000412899 FAM19A1Q7Z5A9 133 aa10.94□□□□□ -0.66
ITGA6-204ENST00000412899 ANAPC11Q9NYG5 84 aa10.94□□□□□ -0.66
ITGA6-204ENST00000412899 C20orf202A1L168 122 aa10.93□□□□□ -0.66
ITGA6-204ENST00000412899 KRTAP13-1Q8IUC0 172 aa10.93□□□□□ -0.66
ITGA6-204ENST00000412899 MIEN1Q9BRT3 115 aa10.93□□□□□ -0.66
ITGA6-204ENST00000412899 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
ITGA6-204ENST00000412899 LOC107984156A0A0G2JMH3 177 aa10.92□□□□□ -0.66
ITGA6-204ENST00000412899 PRLHP81277 87 aa10.92□□□□□ -0.66
ITGA6-204ENST00000412899 ARL17AQ8IVW1 177 aa10.92□□□□□ -0.66
ITGA6-204ENST00000412899 ADAMTSL4-AS1Q5T5F5 129 aa10.9□□□□□ -0.66
ITGA6-204ENST00000412899 MUC2Q02817 5179 aa10.89□□□□□ -0.67
ITGA6-204ENST00000412899 ZNF815PA8K554 130 aa10.88□□□□□ -0.67
ITGA6-204ENST00000412899 S100A2P29034 98 aa10.88□□□□□ -0.67
ITGA6-204ENST00000412899 NPC2P61916 151 aa10.88□□□□□ -0.67
ITGA6-204ENST00000412899 KRTAP13-2Q52LG2 175 aa10.88□□□□□ -0.67
ITGA6-204ENST00000412899 RETNLBQ9BQ08 111 aa10.88□□□□□ -0.67
ITGA6-204ENST00000412899 KRTAP9-2Q9BYQ4 174 aa10.88□□□□□ -0.67
ITGA6-204ENST00000412899 TRBV10-3A0A0K0K1G6 114 aa10.87□□□□□ -0.67
ITGA6-204ENST00000412899 PRYO14603 147 aa10.87□□□□□ -0.67
ITGA6-204ENST00000412899 S100A6P06703 90 aa10.87□□□□□ -0.67
ITGA6-204ENST00000412899 ATOH7Q8N100 152 aa10.87□□□□□ -0.67
ITGA6-204ENST00000412899 HIST3H2BBQ8N257 126 aa10.87□□□□□ -0.67
ITGA6-204ENST00000412899 TTTY13Q9BZ97 58 aa10.87□□□□□ -0.67
ITGA6-204ENST00000412899 KCNQ1DNQ9H478 68 aa10.87□□□□□ -0.67
ITGA6-204ENST00000412899 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
ITGA6-204ENST00000412899 AKR1D1P51857 326 aa10.86□□□□□ -0.67
ITGA6-204ENST00000412899 S100A12P80511 92 aa10.86□□□□□ -0.67
ITGA6-204ENST00000412899 FAM229BQ4G0N7 80 aa10.86□□□□□ -0.67
ITGA6-204ENST00000412899 LINC00304Q8N9R0 145 aa10.86□□□□□ -0.67
ITGA6-204ENST00000412899 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
ITGA6-204ENST00000412899 NDUFC2O95298 119 aa10.85□□□□□ -0.67
ITGA6-204ENST00000412899 SOSTDC1Q6X4U4 206 aa10.85□□□□□ -0.67
ITGA6-204ENST00000412899 HIST1H2BLQ99880 126 aa10.85□□□□□ -0.67
ITGA6-204ENST00000412899 EIF4EBP3O60516 100 aaPredicted RBP10.84□□□□□ -0.67
ITGA6-204ENST00000412899 TIMM17BO60830 172 aa10.84□□□□□ -0.67
ITGA6-204ENST00000412899 DDTP30046 118 aa10.84□□□□□ -0.67
ITGA6-204ENST00000412899 LITAFQ99732 161 aa10.84□□□□□ -0.67
ITGA6-204ENST00000412899 HIGD2AQ9BW72 106 aa10.84□□□□□ -0.67
ITGA6-204ENST00000412899 ANKRD39Q53RE8 183 aa10.83□□□□□ -0.68
ITGA6-204ENST00000412899 CDIP1Q9H305 208 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms