RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 LINC01620Q4KN68 170 aa6.63□□□□□ -1.35
LINC01643-201ENST00000412218 PRR34Q9NV39 138 aa6.63□□□□□ -1.35
LINC01643-201ENST00000412218 C14orf177Q52M58 125 aa6.62□□□□□ -1.35
LINC01643-201ENST00000412218 LCE2AQ5TA79 106 aaPredicted RBP6.62□□□□□ -1.35
LINC01643-201ENST00000412218 ERG28Q9UKR5 140 aa6.62□□□□□ -1.35
LINC01643-201ENST00000412218 FAT1Q14517 4588 aa6.62□□□□□ -1.35
LINC01643-201ENST00000412218 TRBV20-1A0A075B6N2 111 aa6.61□□□□□ -1.35
LINC01643-201ENST00000412218 ADAMTSL4-AS1Q5T5F5 129 aa6.61□□□□□ -1.35
LINC01643-201ENST00000412218 CLPSL2Q6UWE3 100 aa6.61□□□□□ -1.35
LINC01643-201ENST00000412218 CD164L2Q6UWJ8 174 aa6.61□□□□□ -1.35
LINC01643-201ENST00000412218 LINC00269Q8N2A0 174 aa6.61□□□□□ -1.35
LINC01643-201ENST00000412218 VPS13BQ7Z7G8 4022 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 USP17L23D6RBM5 183 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 CXCL5P42830 114 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 XCL1P47992 114 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 REG3AQ06141 175 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 SCXQ7RTU7 201 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 C5orf38Q86SI9 138 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 Q8IZM0 81 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 LINC00528Q8N1L1 170 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 LINC00308Q8TCZ7 52 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 TOMM7Q9P0U1 55 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 DNAH8Q96JB1 4490 aa6.6□□□□□ -1.35
LINC01643-201ENST00000412218 LOC107984156A0A0G2JMH3 177 aa6.59□□□□□ -1.35
LINC01643-201ENST00000412218 F8W1H4 67 aa6.59□□□□□ -1.35
LINC01643-201ENST00000412218 COX7A2LO14548 114 aa6.59□□□□□ -1.35
LINC01643-201ENST00000412218 Q1RN00 199 aa6.59□□□□□ -1.35
LINC01643-201ENST00000412218 ARL17AQ8IVW1 177 aa6.59□□□□□ -1.35
LINC01643-201ENST00000412218 PLA2G1BP04054 148 aaKnown RBP6.58□□□□□ -1.36
LINC01643-201ENST00000412218 PSMB2P49721 201 aa6.58□□□□□ -1.36
LINC01643-201ENST00000412218 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
LINC01643-201ENST00000412218 IGLV10-54A0A075B6I4 117 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 TRBV30A0A0K0K1B3 111 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 EIF4EBP3O60516 100 aaPredicted RBP6.57□□□□□ -1.36
LINC01643-201ENST00000412218 SCGB1C2P0DMR2 95 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 MALP21145 153 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 NPC2P61916 151 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 C6orf226Q5I0X4 101 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 CIRBP-AS1Q8TBR5 109 aa6.57□□□□□ -1.36
LINC01643-201ENST00000412218 TRAV8-4A0A0B4J246 113 aa6.56□□□□□ -1.36
LINC01643-201ENST00000412218 H3BMG7 143 aa6.56□□□□□ -1.36
LINC01643-201ENST00000412218 J3QL48 77 aa6.56□□□□□ -1.36
LINC01643-201ENST00000412218 K7ERU9 68 aa6.56□□□□□ -1.36
LINC01643-201ENST00000412218 COX6CP09669 75 aa6.56□□□□□ -1.36
LINC01643-201ENST00000412218 RPL13AP40429 203 aaKnown RBP6.56□□□□□ -1.36
LINC01643-201ENST00000412218 DAND5Q8N907 189 aa6.56□□□□□ -1.36
LINC01643-201ENST00000412218 CBY1Q9Y3M2 126 aa6.56□□□□□ -1.36
LINC01643-201ENST00000412218 A0A0U1RRA0 63 aa6.55□□□□□ -1.36
LINC01643-201ENST00000412218 H7C2G1 150 aa6.55□□□□□ -1.36
LINC01643-201ENST00000412218 LINC00158P58513 81 aa6.55□□□□□ -1.36
LINC01643-201ENST00000412218 KRTAP10-4P60372 401 aaPredicted RBP6.55□□□□□ -1.36
LINC01643-201ENST00000412218 CKS1BP61024 79 aa6.55□□□□□ -1.36
LINC01643-201ENST00000412218 FOXI1Q12951 378 aa6.55□□□□□ -1.36
LINC01643-201ENST00000412218 MIR7-3HGQ8N6C7 128 aa6.55□□□□□ -1.36
LINC01643-201ENST00000412218 TRAV13-2A0A0B4J235 113 aa6.54□□□□□ -1.36
LINC01643-201ENST00000412218 GAGE12HA6NDE8 117 aa6.54□□□□□ -1.36
LINC01643-201ENST00000412218 TCL1BO95988 128 aa6.54□□□□□ -1.36
LINC01643-201ENST00000412218 ATXN8Q156A1 80 aa6.54□□□□□ -1.36
LINC01643-201ENST00000412218 OCIAD2Q56VL3 154 aa6.54□□□□□ -1.36
LINC01643-201ENST00000412218 SOSTDC1Q6X4U4 206 aa6.54□□□□□ -1.36
LINC01643-201ENST00000412218 C9orf163Q8N9P6 203 aa6.54□□□□□ -1.36
LINC01643-201ENST00000412218 MYCBP2O75592 4640 aa6.53□□□□□ -1.36
LINC01643-201ENST00000412218 TRIAP1O43715 76 aa6.53□□□□□ -1.36
LINC01643-201ENST00000412218 CNBPP62633 177 aaKnown RBP6.53□□□□□ -1.36
LINC01643-201ENST00000412218 COX17Q14061 63 aa6.53□□□□□ -1.36
LINC01643-201ENST00000412218 PRO0461Q9UI25 63 aa6.53□□□□□ -1.36
LINC01643-201ENST00000412218 HERC1Q15751 4861 aa6.53□□□□□ -1.36
LINC01643-201ENST00000412218 M0QXV9 152 aa6.52□□□□□ -1.37
LINC01643-201ENST00000412218 SPAG11BQ08648 103 aa6.52□□□□□ -1.37
LINC01643-201ENST00000412218 SND1-IT1Q9HBX3 110 aa6.52□□□□□ -1.37
LINC01643-201ENST00000412218 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.52□□□□□ -1.37
LINC01643-201ENST00000412218 SRRM2Q9UQ35 2752 aaKnown RBP6.51□□□□□ -1.37
LINC01643-201ENST00000412218 PANO1I0J062 215 aa6.51□□□□□ -1.37
LINC01643-201ENST00000412218 J3QR89 54 aa6.51□□□□□ -1.37
LINC01643-201ENST00000412218 PFN2P35080 140 aa6.51□□□□□ -1.37
LINC01643-201ENST00000412218 KIAA0087Q14695 138 aa6.51□□□□□ -1.37
LINC01643-201ENST00000412218 SDIM1Q6ZPB5 146 aa6.51□□□□□ -1.37
LINC01643-201ENST00000412218 C15orf56Q8N910 161 aa6.51□□□□□ -1.37
LINC01643-201ENST00000412218 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
LINC01643-201ENST00000412218 SLPIP03973 132 aa6.5□□□□□ -1.37
LINC01643-201ENST00000412218 GVQW2A0A096LPI5 108 aaPredicted RBP6.48□□□□□ -1.37
LINC01643-201ENST00000412218 F8WDY8 70 aa6.48□□□□□ -1.37
LINC01643-201ENST00000412218 LST1O00453 97 aa6.48□□□□□ -1.37
LINC01643-201ENST00000412218 NDUFC2O95298 119 aa6.48□□□□□ -1.37
LINC01643-201ENST00000412218 RPL37AP61513 92 aaKnown RBP6.48□□□□□ -1.37
LINC01643-201ENST00000412218 C2orf82Q6UX34 121 aa6.48□□□□□ -1.37
LINC01643-201ENST00000412218 TRBV10-2A0A0K0K1G8 114 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 C9JAW5 83 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 H3BT86 120 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 SLC25A20O43772 301 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
LINC01643-201ENST00000412218 ETDBQ3ZM63 59 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 HIGD2BQ4VC39 106 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 MTURNQ8N3F0 131 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 SPACA4Q8TDM5 124 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 LINC01600Q96MT4 127 aa6.47□□□□□ -1.37
LINC01643-201ENST00000412218 IGKV2-28A0A075B6P5 120 aa6.46□□□□□ -1.38
LINC01643-201ENST00000412218 IGKV2D-28P01615 120 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms