RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 QSER1Q2KHR3 1735 aa1.66□□□□□ -2.14
BRCA1-204ENST00000412061 RICTORQ6R327 1708 aa1.66□□□□□ -2.14
BRCA1-204ENST00000412061 PIN1P1O15428 100 aa1.66□□□□□ -2.14
BRCA1-204ENST00000412061 ANGP03950 147 aaKnown RBP1.66□□□□□ -2.14
BRCA1-204ENST00000412061 HMGA1P17096 107 aaKnown RBP1.66□□□□□ -2.14
BRCA1-204ENST00000412061 Q6ZRX8 168 aa1.66□□□□□ -2.14
BRCA1-204ENST00000412061 SMIM5Q71RC9 77 aa1.66□□□□□ -2.14
BRCA1-204ENST00000412061 CMC2Q9NRP2 79 aa1.66□□□□□ -2.14
BRCA1-204ENST00000412061 F8WEM9 126 aa1.65□□□□□ -2.15
BRCA1-204ENST00000412061 BCE1O60756 84 aa1.65□□□□□ -2.15
BRCA1-204ENST00000412061 GCHFRP30047 84 aa1.65□□□□□ -2.15
BRCA1-204ENST00000412061 LY75O60449 1722 aa1.64□□□□□ -2.15
BRCA1-204ENST00000412061 CCL22O00626 93 aa1.64□□□□□ -2.15
BRCA1-204ENST00000412061 IGLC2P0DOY2 106 aa1.64□□□□□ -2.15
BRCA1-204ENST00000412061 IGLC3P0DOY3 106 aa1.64□□□□□ -2.15
BRCA1-204ENST00000412061 FDCSPQ8NFU4 85 aa1.64□□□□□ -2.15
BRCA1-204ENST00000412061 A0A0G2JMZ2 1700 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 LRRC37A2A6NM11 1700 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 LRRC37AA6NMS7 1700 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 A0A087WVE0 104 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 G3V318 75 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 K7EIL1 84 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 PRH1P02810 166 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 FXYD6P3P58550 94 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 ADIRFQ15847 76 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 LINC00472Q9H8W2 130 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 ST20Q9HBF5 79 aa1.63□□□□□ -2.15
BRCA1-204ENST00000412061 TSC2P49815 1807 aa1.62□□□□□ -2.15
BRCA1-204ENST00000412061 ARMS2P0C7Q2 107 aa1.62□□□□□ -2.15
BRCA1-204ENST00000412061 SERF2P84101 59 aa1.62□□□□□ -2.15
BRCA1-204ENST00000412061 WFDC2Q14508 124 aa1.62□□□□□ -2.15
BRCA1-204ENST00000412061 NMSQ5H8A3 153 aa1.62□□□□□ -2.15
BRCA1-204ENST00000412061 PSENENQ9NZ42 101 aa1.62□□□□□ -2.15
BRCA1-204ENST00000412061 COL6A6A6NMZ7 2263 aa1.61□□□□□ -2.15
BRCA1-204ENST00000412061 IFI6P09912 130 aa1.61□□□□□ -2.15
BRCA1-204ENST00000412061 KRTAP21-3Q3LHN1 58 aa1.61□□□□□ -2.15
BRCA1-204ENST00000412061 LINC01590Q5TEZ4 76 aa1.61□□□□□ -2.15
BRCA1-204ENST00000412061 SPRR4Q96PI1 79 aa1.61□□□□□ -2.15
BRCA1-204ENST00000412061 ROS1P08922 2347 aa1.6□□□□□ -2.15
BRCA1-204ENST00000412061 CPSF4LA6NMK7 179 aaKnown RBP1.6□□□□□ -2.15
BRCA1-204ENST00000412061 HMGN2P05204 90 aaKnown RBP1.6□□□□□ -2.15
BRCA1-204ENST00000412061 BVES-AS1Q5T3Y7 98 aa1.6□□□□□ -2.15
BRCA1-204ENST00000412061 C18orf32Q8TCD1 76 aa1.6□□□□□ -2.15
BRCA1-204ENST00000412061 BPTFQ12830 3046 aa1.59□□□□□ -2.15
BRCA1-204ENST00000412061 ANKRD36A6QL64 1941 aa1.59□□□□□ -2.15
BRCA1-204ENST00000412061 ZNF831Q5JPB2 1677 aa1.59□□□□□ -2.15
BRCA1-204ENST00000412061 DNAJC13O75165 2243 aa1.59□□□□□ -2.16
BRCA1-204ENST00000412061 CADP27708 2225 aa1.59□□□□□ -2.16
BRCA1-204ENST00000412061 CACNA1CQ13936 2221 aa1.59□□□□□ -2.16
BRCA1-204ENST00000412061 C3orf79P0CE67 100 aa1.59□□□□□ -2.16
BRCA1-204ENST00000412061 GNG13Q9P2W3 67 aa1.59□□□□□ -2.16
BRCA1-204ENST00000412061 CEBPZOSA8MTT3 80 aa1.58□□□□□ -2.16
BRCA1-204ENST00000412061 LEPROTL1O95214 131 aa1.58□□□□□ -2.16
BRCA1-204ENST00000412061 HAMPP81172 84 aa1.58□□□□□ -2.16
BRCA1-204ENST00000412061 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
BRCA1-204ENST00000412061 Q6JHZ5 121 aa1.58□□□□□ -2.16
BRCA1-204ENST00000412061 COL14A1Q05707 1796 aaKnown RBP1.58□□□□□ -2.16
BRCA1-204ENST00000412061 D6R8Y8 96 aa1.57□□□□□ -2.16
BRCA1-204ENST00000412061 COX8AP10176 69 aa1.57□□□□□ -2.16
BRCA1-204ENST00000412061 LINC00643Q86TS7 51 aa1.57□□□□□ -2.16
BRCA1-204ENST00000412061 MUSTN1Q8IVN3 82 aa1.57□□□□□ -2.16
BRCA1-204ENST00000412061 TMEM263Q8WUH6 116 aaKnown RBP1.57□□□□□ -2.16
BRCA1-204ENST00000412061 LINC00846Q9NV44 126 aa1.57□□□□□ -2.16
BRCA1-204ENST00000412061 IQCF6A8MYZ5 107 aa1.56□□□□□ -2.16
BRCA1-204ENST00000412061 SMIM13P0DJ93 91 aa1.56□□□□□ -2.16
BRCA1-204ENST00000412061 ARHGAP5-AS1Q96IT6 56 aa1.56□□□□□ -2.16
BRCA1-204ENST00000412061 FAM103A1Q9BTL3 118 aaKnown RBP1.56□□□□□ -2.16
BRCA1-204ENST00000412061 TTTY10Q9BZA0 68 aa1.56□□□□□ -2.16
BRCA1-204ENST00000412061 PROK2Q9HC23 129 aa1.56□□□□□ -2.16
BRCA1-204ENST00000412061 UBR3Q6ZT12 1888 aa1.56□□□□□ -2.16
BRCA1-204ENST00000412061 PLXNB2O15031 1838 aa1.55□□□□□ -2.16
BRCA1-204ENST00000412061 SMIM27A0A1W2PRY6 76 aa1.55□□□□□ -2.16
BRCA1-204ENST00000412061 H3BUT2 72 aa1.55□□□□□ -2.16
BRCA1-204ENST00000412061 ACYP1P07311 99 aa1.55□□□□□ -2.16
BRCA1-204ENST00000412061 C10orf113Q5VZT2 155 aa1.55□□□□□ -2.16
BRCA1-204ENST00000412061 LINC01600Q96MT4 127 aa1.55□□□□□ -2.16
BRCA1-204ENST00000412061 Q9Y3F1 56 aa1.54□□□□□ -2.16
BRCA1-204ENST00000412061 RPS27P42677 84 aaKnown RBP1.53□□□□□ -2.16
BRCA1-204ENST00000412061 C6orf201Q7Z4U5 140 aa1.53□□□□□ -2.16
BRCA1-204ENST00000412061 UBE2DNLQ8IWF7 75 aa1.53□□□□□ -2.16
BRCA1-204ENST00000412061 COX14Q96I36 57 aa1.53□□□□□ -2.16
BRCA1-204ENST00000412061 ASXL3Q9C0F0 2248 aa1.53□□□□□ -2.16
BRCA1-204ENST00000412061 PAPPA2Q9BXP8 1791 aa1.52□□□□□ -2.17
BRCA1-204ENST00000412061 MYMXA0A1B0GTQ4 84 aa1.52□□□□□ -2.17
BRCA1-204ENST00000412061 H0Y9P7 68 aa1.52□□□□□ -2.17
BRCA1-204ENST00000412061 H3BSH0 61 aa1.52□□□□□ -2.17
BRCA1-204ENST00000412061 TMEM167BQ9NRX6 74 aa1.52□□□□□ -2.17
BRCA1-204ENST00000412061 NAV3Q8IVL0 2385 aa1.51□□□□□ -2.17
BRCA1-204ENST00000412061 TRBV6-1A0A0K0K1D8 114 aa1.51□□□□□ -2.17
BRCA1-204ENST00000412061 LINC01546A6NGU7 62 aa1.51□□□□□ -2.17
BRCA1-204ENST00000412061 PLGLAQ15195 96 aa1.51□□□□□ -2.17
BRCA1-204ENST00000412061 SPINK9Q5DT21 86 aa1.51□□□□□ -2.17
BRCA1-204ENST00000412061 MUC6Q6W4X9 2439 aa1.5□□□□□ -2.17
BRCA1-204ENST00000412061 ARL14EPLP0DKL9 152 aa1.5□□□□□ -2.17
BRCA1-204ENST00000412061 IAPPP10997 89 aa1.5□□□□□ -2.17
BRCA1-204ENST00000412061 SPINK7P58062 85 aa1.5□□□□□ -2.17
BRCA1-204ENST00000412061 KRTAP10-4P60372 401 aaPredicted RBP1.5□□□□□ -2.17
BRCA1-204ENST00000412061 PLAC8Q9NZF1 115 aa1.5□□□□□ -2.17
BRCA1-204ENST00000412061 ZFHX3Q15911 3703 aa1.5□□□□□ -2.17
BRCA1-204ENST00000412061 H0YGG7 62 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms