RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

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Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 COX7BP24311 80 aa8.65□□□□□ -1.03
HERC3-203ENST00000407637 C10orf25Q5T742 122 aa8.65□□□□□ -1.03
HERC3-203ENST00000407637 DEFB114Q30KQ6 69 aa8.64□□□□□ -1.03
HERC3-203ENST00000407637 H3BQ85 93 aa8.63□□□□□ -1.03
HERC3-203ENST00000407637 MSMBP08118 114 aa8.63□□□□□ -1.03
HERC3-203ENST00000407637 SMIM29Q86T20 159 aa8.63□□□□□ -1.03
HERC3-203ENST00000407637 IGLV10-54A0A075B6I4 117 aa8.62□□□□□ -1.03
HERC3-203ENST00000407637 SETXQ7Z333 2677 aaKnown RBP8.62□□□□□ -1.03
HERC3-203ENST00000407637 DIRC1Q969H9 104 aa8.62□□□□□ -1.03
HERC3-203ENST00000407637 IGHV4-28A0A0C4DH34 117 aa8.61□□□□□ -1.03
HERC3-203ENST00000407637 C3orf84H3BNL1 204 aa8.61□□□□□ -1.03
HERC3-203ENST00000407637 ZNF702PQ9H963 129 aa8.61□□□□□ -1.03
HERC3-203ENST00000407637 KLK12Q9UKR0 248 aa8.61□□□□□ -1.03
HERC3-203ENST00000407637 ZANQ9Y493 2812 aa8.61□□□□□ -1.03
HERC3-203ENST00000407637 PRB2P02812 416 aaPredicted RBP8.6□□□□□ -1.03
HERC3-203ENST00000407637 IGHV4-30-2A0A087WSY4 118 aa8.6□□□□□ -1.03
HERC3-203ENST00000407637 PRR4Q16378 134 aa8.6□□□□□ -1.03
HERC3-203ENST00000407637 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
HERC3-203ENST00000407637 APCP25054 2843 aa8.59□□□□□ -1.03
HERC3-203ENST00000407637 MXRA5Q9NR99 2828 aa8.59□□□□□ -1.03
HERC3-203ENST00000407637 A8MUN3 132 aa8.59□□□□□ -1.03
HERC3-203ENST00000407637 OXLD1Q5BKU9 147 aa8.59□□□□□ -1.03
HERC3-203ENST00000407637 UNQ6190/PRO20217Q6UXQ8 127 aa8.59□□□□□ -1.03
HERC3-203ENST00000407637 CHCHD10Q8WYQ3 142 aaPredicted RBP8.59□□□□□ -1.03
HERC3-203ENST00000407637 FN1P02751 2386 aaKnown RBP8.58□□□□□ -1.04
HERC3-203ENST00000407637 A0A096LPF7 62 aa8.58□□□□□ -1.04
HERC3-203ENST00000407637 GIG44P09565 113 aaPredicted RBP8.57□□□□□ -1.04
HERC3-203ENST00000407637 A0A1B0GUV1 79 aa8.57□□□□□ -1.04
HERC3-203ENST00000407637 ZNF73O43830 326 aaPredicted RBP8.57□□□□□ -1.04
HERC3-203ENST00000407637 SYCNQ0VAF6 134 aa8.56□□□□□ -1.04
HERC3-203ENST00000407637 NIPBLQ6KC79 2804 aaeCLIP8.56□□□□□ -1.04
HERC3-203ENST00000407637 PTPN13Q12923 2485 aa8.56□□□□□ -1.04
HERC3-203ENST00000407637 LCE6AA0A183 80 aa8.56□□□□□ -1.04
HERC3-203ENST00000407637 GYPEP15421 78 aa8.56□□□□□ -1.04
HERC3-203ENST00000407637 MRPL55Q7Z7F7 128 aaKnown RBP8.56□□□□□ -1.04
HERC3-203ENST00000407637 PSCAO43653 123 aa8.55□□□□□ -1.04
HERC3-203ENST00000407637 ELOF1P60002 83 aaKnown RBP8.55□□□□□ -1.04
HERC3-203ENST00000407637 CCL24O00175 119 aa8.55□□□□□ -1.04
HERC3-203ENST00000407637 WFDC10AQ9H1F0 79 aa8.55□□□□□ -1.04
HERC3-203ENST00000407637 IGHV4-30-4P0DP06 118 aa8.54□□□□□ -1.04
HERC3-203ENST00000407637 HIGD2BQ4VC39 106 aa8.54□□□□□ -1.04
HERC3-203ENST00000407637 ZCCHC13Q8WW36 166 aaKnown RBP8.54□□□□□ -1.04
HERC3-203ENST00000407637 XAGE1AQ9HD64 81 aa8.54□□□□□ -1.04
HERC3-203ENST00000407637 B4DSR2 109 aa8.54□□□□□ -1.04
HERC3-203ENST00000407637 SPAG11BQ08648 103 aa8.54□□□□□ -1.04
HERC3-203ENST00000407637 USP9YO00507 2555 aaPredicted RBP8.54□□□□□ -1.04
HERC3-203ENST00000407637 DEFB130BP0DP73 79 aa8.53□□□□□ -1.04
HERC3-203ENST00000407637 DEFB130AP0DP74 79 aa8.53□□□□□ -1.04
HERC3-203ENST00000407637 FBN2P35556 2912 aa8.53□□□□□ -1.04
HERC3-203ENST00000407637 C4orf3Q8WVX3 66 aa8.53□□□□□ -1.04
HERC3-203ENST00000407637 Q5VV11 94 aa8.52□□□□□ -1.04
HERC3-203ENST00000407637 RBM12B-AS1Q9P1G2 102 aa8.52□□□□□ -1.04
HERC3-203ENST00000407637 CYSRT1A8MQ03 144 aa8.51□□□□□ -1.05
HERC3-203ENST00000407637 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
HERC3-203ENST00000407637 CCL19Q99731 98 aa8.51□□□□□ -1.05
HERC3-203ENST00000407637 UBE2BP63146 152 aa8.51□□□□□ -1.05
HERC3-203ENST00000407637 REG3AQ06141 175 aa8.51□□□□□ -1.05
HERC3-203ENST00000407637 KTN1-AS1Q86SY8 53 aa8.51□□□□□ -1.05
HERC3-203ENST00000407637 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.5□□□□□ -1.05
HERC3-203ENST00000407637 CYP4F30PQ9H0H9 118 aa8.5□□□□□ -1.05
HERC3-203ENST00000407637 LINC00588Q9Y4M8 146 aa8.5□□□□□ -1.05
HERC3-203ENST00000407637 NBEAL2Q6ZNJ1 2754 aa8.5□□□□□ -1.05
HERC3-203ENST00000407637 ZFYVE26Q68DK2 2539 aa8.5□□□□□ -1.05
HERC3-203ENST00000407637 CSNK1G2-AS1Q8NCQ2 148 aa8.5□□□□□ -1.05
HERC3-203ENST00000407637 ST20-AS1Q8NBB2 130 aa8.49□□□□□ -1.05
HERC3-203ENST00000407637 USP9XQ93008 2570 aaPredicted RBP8.48□□□□□ -1.05
HERC3-203ENST00000407637 A0A0J9YWU9 116 aa8.48□□□□□ -1.05
HERC3-203ENST00000407637 GCN1Q92616 2671 aaKnown RBP8.48□□□□□ -1.05
HERC3-203ENST00000407637 ETDCA0A1B0GVM5 59 aa8.48□□□□□ -1.05
HERC3-203ENST00000407637 C16orf90A8MZG2 172 aa8.47□□□□□ -1.05
HERC3-203ENST00000407637 SETD2Q9BYW2 2564 aaPredicted RBP8.47□□□□□ -1.05
HERC3-203ENST00000407637 EPG5Q9HCE0 2579 aa8.47□□□□□ -1.05
HERC3-203ENST00000407637 CHKB-CPT1BH3BT56 60 aa8.47□□□□□ -1.05
HERC3-203ENST00000407637 LINC00528Q8N1L1 170 aa8.47□□□□□ -1.05
HERC3-203ENST00000407637 SPTSSBQ8NFR3 76 aa8.47□□□□□ -1.05
HERC3-203ENST00000407637 SONP18583 2426 aaKnown RBP8.46□□□□□ -1.06
HERC3-203ENST00000407637 UTP20O75691 2785 aaKnown RBP8.46□□□□□ -1.06
HERC3-203ENST00000407637 ACACBO00763 2458 aa8.45□□□□□ -1.06
HERC3-203ENST00000407637 UBE2AP49459 152 aa8.45□□□□□ -1.06
HERC3-203ENST00000407637 MAPK1IP1LQ8NDC0 245 aa8.45□□□□□ -1.06
HERC3-203ENST00000407637 DEFB105AQ8NG35 78 aa8.45□□□□□ -1.06
HERC3-203ENST00000407637 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
HERC3-203ENST00000407637 CFAP46Q8IYW2 2715 aa8.45□□□□□ -1.06
HERC3-203ENST00000407637 Q6YL49 198 aa8.44□□□□□ -1.06
HERC3-203ENST00000407637 CACNA1AO00555 2505 aa8.44□□□□□ -1.06
HERC3-203ENST00000407637 M0R378 163 aa8.44□□□□□ -1.06
HERC3-203ENST00000407637 LYRM9A8MSI8 78 aa8.43□□□□□ -1.06
HERC3-203ENST00000407637 TEX15Q9BXT5 2789 aa8.43□□□□□ -1.06
HERC3-203ENST00000407637 LRRK2Q5S007 2527 aa8.43□□□□□ -1.06
HERC3-203ENST00000407637 K7EQZ3 153 aa8.42□□□□□ -1.06
HERC3-203ENST00000407637 VPREB1P12018 145 aa8.42□□□□□ -1.06
HERC3-203ENST00000407637 KPRPQ5T749 579 aaPredicted RBP8.42□□□□□ -1.06
HERC3-203ENST00000407637 PKD1L2Q7Z442 2459 aa8.42□□□□□ -1.06
HERC3-203ENST00000407637 PRR15LQ9BU68 103 aa8.42□□□□□ -1.06
HERC3-203ENST00000407637 ANKRD17O75179 2603 aaKnown RBP8.41□□□□□ -1.06
HERC3-203ENST00000407637 POLQO75417 2590 aa8.41□□□□□ -1.06
HERC3-203ENST00000407637 HCG22E2RYF7 251 aa8.41□□□□□ -1.06
HERC3-203ENST00000407637 DSCR10P59022 87 aa8.41□□□□□ -1.06
HERC3-203ENST00000407637 A0A1W2PNM2 257 aa8.4□□□□□ -1.06
HERC3-203ENST00000407637 ESM1Q9NQ30 184 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms